prot_L-elsbetiae_contig5074.13104.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5074.13104.1
Unique Nameprot_L-elsbetiae_contig5074.13104.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length224
Homology
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: D8LGE7_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE7_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.570e-80
Identity = 137/192 (71.35%), Postives = 150/192 (78.12%), Query Frame = 0
Query:    1 MASRPRM-SGVGIGGVGCPPGTQFGGSRXXXXXXXXXXXXXXXXXXXXXXXGKGGKPDPWLAGTAPPCTTALAMSRDAARLRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATFQRRHGVRPEKLMEGVCIQNAKNLDEQMMIIV 189
            M SR R+ SG GI GVGCPPG Q+G +R                       GK  KPDPWLAGTAP CTTALAMS+DAARL RLSFGC +LDAAFEGGVRVQG+TE   +AGAGKTQLCLQLLLQAQLA E GGLGGKSYVLTCGEGDFPSRRLRQ+A+T+Q RHGV+PEKLMEGVCIQNAK LD+QMMII+
Sbjct:    3 MDSRSRVVSGGGISGVGCPPGPQYGVNRRQSPHGQQPHRLS----------GKSSKPDPWLAGTAPECTTALAMSKDAARLDRLSFGCPSLDAAFEGGVRVQGVTEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIM 184          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A6H5KY82_9PHAE (RECA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY82_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.130e-77
Identity = 136/192 (70.83%), Postives = 149/192 (77.60%), Query Frame = 0
Query:    1 MASRPRM-SGVGIGGVGCPPGTQFGGSRXXXXXXXXXXXXXXXXXXXXXXXGKGGKPDPWLAGTAPPCTTALAMSRDAARLRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATFQRRHGVRPEKLMEGVCIQNAKNLDEQMMIIV 189
            M SR R+ SG GI GVGCPPG Q+G +R                       GK  KPDPWLAGTAP CTTALAM ++AARL RLSFGC +LDAAFEGGVRVQGITE   +AGAGKTQLCLQLLLQAQLA E GGLGGKSYVLTCGEGDFPSRRLRQ+A+T+Q RHGV+PEKLMEGVCIQNAK LD+QMMII+
Sbjct:    3 MDSRSRLVSGGGIRGVGCPPGPQYGVNRRQPPHGQQQHRLS----------GKSNKPDPWLAGTAPECTTALAMLKNAARLDRLSFGCPSLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIM 184          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A7S3F398_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F398_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 6.920e-14
Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 0
Query:   80 LRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPS-----RRLRQIAATFQRRH---GVRPEKLMEGVCIQNAKN---LDEQMMIIVSAFLVAQQLR 199
            +R+LS GC +LD    GG+   GITE   +AGAGKTQL LQLLL+ QL    GGLGG +  L     D PS      RLR +AATF  +H   G   ++LM+ V +    +   L+E +   V + L  +Q+R
Sbjct:   33 MRKLSLGCPHLDRCLAGGIDHSGITEIAGEAGAGKTQLVLQLLLRVQLPHALGGLGGGAIFL---HSDAPSYMPAMSRLRSLAATFANQHRAYGATSDRLMDNVAVMQVDHPDDLEEILRTAVPSHLRVKQVR 162          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A2G8LRK6_STIJA (Putative DNA repair protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LRK6_STIJA)

HSP 1 Score: 78.6 bits (192), Expect = 1.860e-13
Identity = 46/85 (54.12%), Postives = 56/85 (65.88%), Query Frame = 0
Query:   81 RRLSFGCSNLDAAFEGGVRVQGITEA--KAGAGKTQLCLQLLLQAQLATEEGGL-GGKSYVLTCGEGDFPSRRLRQIAATFQRRH 162
            + LS GC  LD  F GG+  QGITE   ++ AGKTQLCLQL L AQL  E+GGL GG  YV  C E  FPS+RL+Q+  +F  +H
Sbjct:  106 KSLSLGCPILDEIFRGGILSQGITEVTGESAAGKTQLCLQLCLMAQLPLEDGGLNGGAVYV--CTEDVFPSKRLQQLIKSFPAQH 188          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A537F041_9ARCH (DNA repair and recombination protein RadA n=4 Tax=Archaea TaxID=2157 RepID=A0A537F041_9ARCH)

HSP 1 Score: 75.5 bits (184), Expect = 1.730e-12
Identity = 42/120 (35.00%), Postives = 73/120 (60.83%), Query Frame = 0
Query:   80 LRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATFQRRHGVRPEKLMEGVCIQNAKNLDEQMMIIVSAFLVAQQ 197
            L+RLSFG +NL+    GG+  Q ITE   + GAGK+Q+C++L + AQ   ++GGL G+   +   EG F ++R+ Q+A + Q    + PEK+++G+      N D Q++ +  +F + ++
Sbjct:   80 LQRLSFGSNNLNKLLGGGLETQAITEFVGEFGAGKSQICMRLSVNAQQLNKDGGLEGRVLFIDT-EGTFSAQRVHQMAQSLQ----LDPEKVLDGIIYSRVYNSDHQILTVDHSFKICKE 194          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: UPI001EE62721 (DNA repair protein XRCC3-like isoform X1 n=4 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE62721)

HSP 1 Score: 74.7 bits (182), Expect = 3.790e-12
Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 0
Query:   65 PPCTTALAM---SRDAARLRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGL-GGKSYVLTCGEGDFPSRRLRQIAATFQRR 161
            PP  TAL +   S     +R+LS GC  +D   +GG+   GITE   ++ +GKTQLCLQL L AQL  E GGL GG  YV  C E  FP++RL Q+   F R+
Sbjct:   63 PPVVTALELLKGSGSVVPIRKLSTGCPIIDRHLKGGILSTGITEISGESASGKTQLCLQLCLTAQLPLEHGGLEGGAVYV--CTEDAFPNKRLHQVIQHFTRK 163          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A0M0LPY7_9EUKA (DNA repair protein xrcc3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LPY7_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 6.660e-12
Identity = 46/90 (51.11%), Postives = 53/90 (58.89%), Query Frame = 0
Query:   77 AARLRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPS--RRLRQIAATFQRRH 162
            A   R L  GC +LDA   GG+   GITE   +AGAGKTQL LQL LQAQL   EGGLGG +  L  G  +     RRL Q+A  F +RH
Sbjct:    5 AGHTRLLKTGCPHLDAFLGGGIDTNGITEIAGEAGAGKTQLALQLTLQAQLPPAEGGLGGAAVYLYGGTANVEPALRRLHQLADAFAKRH 94          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A7M7GGZ6_STRPU (RECA_2 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7GGZ6_STRPU)

HSP 1 Score: 73.9 bits (180), Expect = 7.500e-12
Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   83 LSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATFQRRHG 163
            L+ GC  LD    GG+ V+GITE   ++ AGKTQLCLQL L AQL  ++GGL     V  C E  FPS+RL+Q+ ++F RR G
Sbjct:   81 LTTGCPILDEFLHGGILVKGITEIAGQSAAGKTQLCLQLCLTAQLPVQQGGLAN-GVVYICTEDVFPSKRLQQLISSFNRRIG 162          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: D6WL17_TRICA (Spindle B n=3 Tax=Tribolium castaneum TaxID=7070 RepID=D6WL17_TRICA)

HSP 1 Score: 72.0 bits (175), Expect = 2.650e-11
Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   82 RLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATF 158
            R+S GCS +DA   GG+ V  I+E    AG GKTQLCLQL L AQL    GGLG KS V  C E  FP +RL+ +A T+
Sbjct:   73 RISTGCSAIDAITRGGIAVNRISEIVGYAGVGKTQLCLQLSLMAQLPISLGGLG-KSVVYLCTEDAFPIKRLKDLAITY 150          
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A1Q3AVJ9_CEPFO (Rad51 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AVJ9_CEPFO)

HSP 1 Score: 71.6 bits (174), Expect = 3.280e-11
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 0
Query:   81 RRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKS-YVLTCGEGDFPSRRLRQIAATFQRRHG---VRPEKLMEGVCIQNAKNLDEQMMIIVSAFLVAQQLRSNLPMYTCIYQGV 212
            ++ + GC  LD   +GG+    +TE  A++G+GKTQLCLQL L AQL +  GGL   S Y+ T  E  FP RRL Q++ +FQ  H    V  +   + V +++  + D+ + I+  A      L++ LP+   +   +
Sbjct:   14 QKCTLGCPVLDRCLDGGIPCNSVTELVAESGSGKTQLCLQLSLMAQLPSSLGGLASSSLYIHT--EFPFPIRRLHQLSTSFQHLHPQLYVHGDNPCDYVFVRSVYSADQLLDIMSKAEFFIANLKTRLPVRLVVIDSI 149          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGE7_ECTSI1.570e-8071.35RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KY82_9PHAE1.130e-7770.83RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S3F398_9EUKA6.920e-1441.35Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A2G8LRK6_STIJA1.860e-1354.12Putative DNA repair protein n=1 Tax=Stichopus japo... [more]
A0A537F041_9ARCH1.730e-1235.00DNA repair and recombination protein RadA n=4 Tax=... [more]
UPI001EE627213.790e-1246.60DNA repair protein XRCC3-like isoform X1 n=4 Tax=H... [more]
A0A0M0LPY7_9EUKA6.660e-1251.11DNA repair protein xrcc3 n=1 Tax=Chrysochromulina ... [more]
A0A7M7GGZ6_STRPU7.500e-1250.60RECA_2 domain-containing protein n=1 Tax=Strongylo... [more]
D6WL17_TRICA2.650e-1153.16Spindle B n=3 Tax=Tribolium castaneum TaxID=7070 R... [more]
A0A1Q3AVJ9_CEPFO3.280e-1134.06Rad51 domain-containing protein n=1 Tax=Cephalotus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 67..204
e-value: 2.9E-23
score: 84.6
NoneNo IPR availablePANTHERPTHR46487FAMILY NOT NAMEDcoord: 76..188
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 6.0
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 69..191
e-value: 5.3E-18
score: 65.2
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 79..223
score: 14.563
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 81..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5074contigL-elsbetiae_contig5074:9758..13071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5074.13104.1mRNA_L-elsbetiae_contig5074.13104.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5074 9758..13233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5074.13104.1 ID=prot_L-elsbetiae_contig5074.13104.1|Name=mRNA_L-elsbetiae_contig5074.13104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp
MASRPRMSGVGIGGVGCPPGTQFGGSRRQQSSHGHQQQRPQQQQQQQRSG
GKGGKPDPWLAGTAPPCTTALAMSRDAARLRRLSFGCSNLDAAFEGGVRV
QGITEAKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRR
LRQIAATFQRRHGVRPEKLMEGVCIQNAKNLDEQMMIIVSAFLVAQQLRS
NLPMYTCIYQGVWREGLKHSMPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase