mRNA_L-elsbetiae_contig1009.130.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1009.130.1 vs. uniprot
Match: A0A6H5JI08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI08_9PHAE) HSP 1 Score: 229 bits (583), Expect = 3.980e-69 Identity = 150/288 (52.08%), Postives = 194/288 (67.36%), Query Frame = 1 Query: 97 AGFGQLESLVDEIQKKQSDHVKLESQLRQQRNRAESEAADAARLKSELEAAAVEKLSFQKKIGLLSRKNEDLAGENAKLMEEKCDFQRSMANNEAKLRENETDLRAAQKNFVEELDKVNAAYSRNRASMKTLSGRTGVGCAEVPSPEELDALKAAAAKAQEASLRLARMSAVEAESQAFKGDAAESAQKLQSMRQEIAALKVLTSNVFLPLTPPGALKSGGGKNSCKTNGAQAMGTTQQQQRVHQHISKLEQEVARHEETANSQANYIDQLEDYANTVEGANAVLRQQ 960 AGFG L SLVD+I KK + +KLESQLRQQR RA++E A A++LK ELE A+ +++S Q++IGLLSR+NEDL E AKL E+ DFQRSM NNEAKL+ENE DL+ AQ+ FVE L+K NA+YSR+RA M TL GR G+GCAE+PSPEEL+A + AA+A E AR+ AVEAESQA K +AA S++K Q +R+EI + K + P + G GKN +T H I+ LE E+AR +T N Q Y+ QLE+YAN+VE N LR++ Sbjct: 2 AGFGHLGSLVDDINKKDGERLKLESQLRQQRMRADAEEAKASQLKGELEVASADRVSLQQEIGLLSRRNEDLIAEKAKLSEQSSDFQRSMFNNEAKLKENERDLKKAQRGFVESLEKSNASYSRHRAVMNTLVGRNGMGCAEIPSPEELEAFRGLAARAAELQ---ARLHAVEAESQALKQEAATSSRKQQVLRREIDSFKRNGAGGKSSAGSP-RVDKGSGKNKQQTXXXXXXXXXXXXXXXH--ITALENEIARLNDTCNRQMEYMSQLEEYANSVEAINEDLRKE 283
BLAST of mRNA_L-elsbetiae_contig1009.130.1 vs. uniprot
Match: D8LN29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN29_ECTSI) HSP 1 Score: 197 bits (502), Expect = 1.120e-58 Identity = 117/202 (57.92%), Postives = 154/202 (76.24%), Query Frame = 1 Query: 97 AGFGQLESLVDEIQKKQSDHVKLESQLRQQRNRAESEAADAARLKSELEAAAVEKLSFQKKIGLLSRKNEDLAGENAKLMEEKCDFQRSMANNEAKLRENETDLRAAQKNFVEELDKVNAAYSRNRASMKTLSGRTGVGCAEVPSPEELDALKAAAAKAQEASLRLARMSAVEAESQAFKGDAAESAQKLQSMRQEIAALKV 702 AGFG L SLVD+I K+ + +KLESQLRQQR RA++E A ++LK ELE A+ +++S Q++IGLLSR+NEDL E AKL E+ DFQRSM NNEAKL+ENE DL+ AQ+ FV+ L+K NA+YSR+RA M L GR GVGCAE+PSPEEL+A + AA+A E AR+ AVEAESQA K +AA S++K + +++EI + K+ Sbjct: 2 AGFGHLGSLVDDINKRDGERLKLESQLRQQRMRADAEEAKVSQLKGELEVASADRVSLQQEIGLLSRRNEDLIAEKAKLSEQSSDFQRSMFNNEAKLKENERDLKEAQRGFVDSLEKSNASYSRHRAVMNNLVGRNGVGCAEIPSPEELEAFRGLAARAAELQ---ARLHAVEAESQALKQEAAASSRKQKVLQREIDSFKI 200 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1009.130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1009.130.1 >prot_L-elsbetiae_contig1009.130.1 ID=prot_L-elsbetiae_contig1009.130.1|Name=mRNA_L-elsbetiae_contig1009.130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=293bp MQPTNAGFGQLESLVDEIQKKQSDHVKLESQLRQQRNRAESEAADAARLKback to top mRNA from alignment at L-elsbetiae_contig1009:18289..26895+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1009.130.1 ID=mRNA_L-elsbetiae_contig1009.130.1|Name=mRNA_L-elsbetiae_contig1009.130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8607bp|location=Sequence derived from alignment at L-elsbetiae_contig1009:18289..26895+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1009:18289..26895+ >mRNA_L-elsbetiae_contig1009.130.1 ID=mRNA_L-elsbetiae_contig1009.130.1|Name=mRNA_L-elsbetiae_contig1009.130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1758bp|location=Sequence derived from alignment at L-elsbetiae_contig1009:18289..26895+ (Laminarionema elsbetiae ELsaHSoW15)back to top |