prot_L-elsbetiae_contig506.13092.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig506.13092.1
Unique Nameprot_L-elsbetiae_contig506.13092.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length222
Homology
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BLAST of mRNA_L-elsbetiae_contig506.13092.1 vs. uniprot
Match: D7G2I8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2I8_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 2.190e-87
Identity = 143/163 (87.73%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:   59 MEQVNPREDADFEMTVDWDEELRKLNASQYGKRQERDLTKDINDPEAVKWARKNAKIAQSAVEKSTDQVRGAMRQAPRWQTLSRDYRFWLGLVVTLSLVSSIISASGRSQDLVVWHDALGSEEFGEALFAHASLLAAATAHSAGDAASQLAETASAGAALVFA 221
            ME VNPREDADFEMTVDWDEELRKLNASQYGKRQERDLTKD+NDPEAVKWARKNAKIAQSA+E  T QVRGAMR+APRWQTLSRDYRFWLGLVV LSLVSS+ISASGRS DLVVW+D LGSE FGEALFAHA+LLAA TAHSAGDAA+QLAET   GAA+VFA
Sbjct:    1 MEGVNPREDADFEMTVDWDEELRKLNASQYGKRQERDLTKDMNDPEAVKWARKNAKIAQSAMEDRTKQVRGAMRKAPRWQTLSRDYRFWLGLVVALSLVSSVISASGRSHDLVVWNDVLGSEPFGEALFAHAALLAATTAHSAGDAATQLAET---GAAMVFA 160
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig506.13092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2I8_ECTSI2.190e-8787.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..221
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.586

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig506contigL-elsbetiae_contig506:25908..29698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig506.13092.1mRNA_L-elsbetiae_contig506.13092.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig506 25878..30580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig506.13092.1 ID=prot_L-elsbetiae_contig506.13092.1|Name=mRNA_L-elsbetiae_contig506.13092.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp
MVSLRFSLLCAGAFAASGANAFGVLQSRGLVVSSQATFSARSVAPKGRSS
SGSRRSLSMEQVNPREDADFEMTVDWDEELRKLNASQYGKRQERDLTKDI
NDPEAVKWARKNAKIAQSAVEKSTDQVRGAMRQAPRWQTLSRDYRFWLGL
VVTLSLVSSIISASGRSQDLVVWHDALGSEEFGEALFAHASLLAAATAHS
AGDAASQLAETASAGAALVFA*
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