mRNA_L-elsbetiae_contig506.13090.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: D7G842_ECTSI (Mitochondrial TOM complex subunit, Tom20 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G842_ECTSI) HSP 1 Score: 266 bits (681), Expect = 7.410e-84 Identity = 136/194 (70.10%), Postives = 158/194 (81.44%), Query Frame = 1 Query: 40 AAQEGGAGA--GAPARVPRSLDRSAPPSFIA--NVNLDGDFVVSREGEPTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 AA EG A A G A P SLDRSAP SFIA NVNLDG+F+ +REGEPTA EL+NENLIKIVAEKSTDEE+N ++WKCLGYRY+ + WKAV VFPRW+ YPEP DL+GVTRVY+ ++DKPV AVQ L R++ E K+ IVEQL+P+GFTGL LDELTPNRTRRAQ+ NFLLY+R+ LWGVPLEEVERRR Sbjct: 48 AAPEGDASAQEGTTATPPPSLDRSAPLSFIAKNNVNLDGEFLSNREGEPTAEELSNENLIKIVAEKSTDEEVNVVVWKCLGYRYDAGENAWKAVKVFPRWEAMYPEPPDLLGVTRVYEKSVDKPVLKAVQALIRAIPSEHKRCIVEQLRPIGFTGLTLDELTPNRTRRAQVTNFLLYFRDQLWGVPLEEVERRR 241
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: A0A835YLS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS9_9STRA) HSP 1 Score: 206 bits (524), Expect = 4.450e-61 Identity = 104/180 (57.78%), Postives = 125/180 (69.44%), Query Frame = 1 Query: 76 ARVPRSLDRSAPPSFIA--NVNLDGDFVVSREGEPTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 A PRSL + PP F NV LD F V +EG PT EL +ENLIKI+ E+S+DEE NWL WKCLGYR T W A VFP W+ +YP+P DLIGVTRVY +D P A Q L R++ E KQ + + PLGFTG KLDELTPNRTRRAQ++NF+LYYRE L+GV LEE++RR+ Sbjct: 9 ASAPRSL--ALPPRFAEKLNVPLDQPFHVVKEGPPTTEELTSENLIKIICERSSDEETNWLAWKCLGYRCSAATGEWTADEVFPGWKSKYPQPPDLIGVTRVYSKEVDGPTMKANQALVRAIPLEHKQSLKTHMTPLGFTGFKLDELTPNRTRRAQVLNFILYYREELFGVSLEELQRRK 186
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: A0A7S3Y7B1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7B1_HETAK) HSP 1 Score: 194 bits (493), Expect = 1.250e-55 Identity = 87/162 (53.70%), Postives = 123/162 (75.93%), Query Frame = 1 Query: 127 NVNLDGDFVVSREG-EPTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 + ++ FV+ R EPT AEL+NENL+K V +++TDEE+N+L+WKCLGYRY P+T+ W VFP+W+E+YP P DLIGVTR Y +D+PV A Q L RS+ +KQ++ +++K +G+ G K++ LTPN+TRRAQ+ N+LL+YRE LWGVPLEE+ RR+ Sbjct: 94 DTSIKSTFVLERNNPEPTEAELSNENLVKNVLQENTDEEVNFLVWKCLGYRYNPETEEWTNEDVFPKWREKYPSPPDLIGVTRTYSKEVDQPVMKANQQLVRSIPMPYKQILKQEMKKVGWKGYKMEGLTPNKTRRAQVTNWLLFYREKLWGVPLEELIRRK 255
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: B7G9R5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9R5_PHATC) HSP 1 Score: 179 bits (453), Expect = 3.510e-49 Identity = 80/157 (50.96%), Postives = 113/157 (71.97%), Query Frame = 1 Query: 139 DGDFVVSREGEPTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 + DF++SR+GEP EL+NENL++I+ + +D E+N L+WKCLGYR++P ++W FP+W+E+YP P DLIG+ R+Y P IDKP A Q + RS+ + KQ + LKP GFTG + ELTPN+TRRAQ N+LLY+RE L+G +EE+ +RR Sbjct: 134 ENDFILSRDGEPKELELSNENLLRILRVECSDLEVNTLVWKCLGYRFDPHANLWNNDKCFPKWKEKYPTPPDLIGMQRIYSPEIDKPSLRANQAIVRSIPVDNKQSLKTHLKPYGFTGYQFAELTPNKTRRAQCANWLLYFREELFGFTVEELRKRR 290
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: A0A7S2RBC0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBC0_9STRA) HSP 1 Score: 174 bits (441), Expect = 6.040e-48 Identity = 85/154 (55.19%), Postives = 109/154 (70.78%), Query Frame = 1 Query: 148 FVVSREGEPTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 FV++ EPT EL NEN+++I+ TD+E+N L+WKCLGYR D W FP+W+E+YPEP DLIGVTR Y +D PV A Q L R+V +FKQ I + L+P GF G KLDELTPN+TRRAQ+ N++LYYRE L GV LEE++RR+ Sbjct: 73 FVLTDSLEPTDEELTNENMLRIILSMCTDQEVNLLVWKCLGYRKNSDGS-WDNEKCFPKWREKYPEPPDLIGVTRTYTKEVDGPVMKANQALVRTVPMKFKQSIRDHLRPEGFFGFKLDELTPNKTRRAQVANWILYYREALHGVSLEELQRRK 225
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: A0A7S0JEB5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JEB5_9EUKA) HSP 1 Score: 171 bits (432), Expect = 7.020e-48 Identity = 83/146 (56.85%), Postives = 108/146 (73.97%), Query Frame = 1 Query: 172 PTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 P ++++E L+KIV +++TDEE N L+WK LGYR TD W A VFP+W ERYP+P DLIGVTR Y +D+PV AVQ+L RSV E K+ +V LKPLG++G LD LTPN+TRRAQ+ N+LLYYR L GVPL+E++RR+ Sbjct: 2 PPPDDISDEVLLKIVLQETTDEETNALVWKYLGYRRSTQTDAWDATFVFPKWAERYPQPPDLIGVTRTYTREVDEPVLRAVQSLQRSVPTEHKKGLVRTLKPLGWSGYILDGLTPNKTRRAQVANWLLYYRTALHGVPLDELQRRK 147
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: K8ZAE0_NANGC (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAE0_NANGC) HSP 1 Score: 173 bits (438), Expect = 2.270e-47 Identity = 81/143 (56.64%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 169 EPTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEV 597 EP AAEL NL+KIV DEE+NWL WKCLGYRY P W VFP+W+ RYP+P DL+GVTR+Y+ +D PVK A L RSV +KQ + E L P GF G K ELTPNRTRRAQ+ N+LLYY+ +LWG+ LE++ Sbjct: 111 EPLAAELEETNLVKIVKLMCKDEEVNWLAWKCLGYRYVPTEGRWDNTRVFPKWRARYPDPPDLVGVTRIYEKEVDFPVKRANTALVRSVPKMYKQSLKELLAPYGFKGYKFAELTPNRTRRAQVCNWLLYYKRDLWGISLEDL 253
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: A0A448ZHX2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHX2_9STRA) HSP 1 Score: 172 bits (435), Expect = 9.740e-47 Identity = 90/185 (48.65%), Postives = 121/185 (65.41%), Query Frame = 1 Query: 64 AGAPARVPRSLDRSAPPSFIANVNLDG-DFVVSREGEPTAAELANENLIKIVAEKS--TDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 AG PA + +A P++ A + G +F VSR G P EL N+NL++IV +S TD E+N L WKCLGYR++ ++ W A VFP+W+ERYPEP D+IG+ R+Y AID + Q L SV E K L+ + + P GFTG K+ ELTPN TRRAQ+VN+LLYYRE L+G +EE+ +R Sbjct: 80 AGYPAIILSPFPDAADPAYAATAPVGGNEFCVSRLGGPVEKELTNDNLVQIVYRRSNVTDIEVNTLAWKCLGYRFDEESSEWTAKEVFPKWKERYPEPPDMIGMQRIYTKAIDGELIKNNQRLTVSVPLECKNLLKQNMAPYGFTGYKVSELTPNLTRRAQIVNWLLYYREELFGYTVEELREKR 264
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: A0A6U6H6A9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6H6A9_9STRA) HSP 1 Score: 171 bits (432), Expect = 2.280e-46 Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 139 DGDFVVSREGEPTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 + DF+VSR G P EL+NENL+KI+ K TD E+N L+WKCLGYR++ D + W FP+W+E+YPEP DLIG+ R+Y D+P A Q + RSV + KQ + LKP GF G + ELTPN+TRRAQ N+LLYYRE L+G +EE+ RR Sbjct: 100 EDDFIVSRHGGPQKEELSNENLLKILLIKCTDLEVNTLVWKCLGYRFDSDNEKWLNTECFPKWKEKYPEPPDLIGMKRMYSKEHDQPSLKANQAIVRSVPVDNKQSLKTHLKPHGFKGYQYSELTPNKTRRAQCANWLLYYREELFGYTVEELRVRR 256
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Match: A0A6T7JM13_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JM13_9STRA) HSP 1 Score: 167 bits (423), Expect = 5.440e-46 Identity = 76/154 (49.35%), Postives = 108/154 (70.13%), Query Frame = 1 Query: 148 FVVSREGEPTAAELANENLIKIVAEKSTDEELNWLLWKCLGYRYEPDTDVWKAVSVFPRWQERYPEPVDLIGVTRVYDPAIDKPVKTAVQTLARSVRPEFKQLIVEQLKPLGFTGLKLDELTPNRTRRAQMVNFLLYYRENLWGVPLEEVERRR 609 F+++REG PT EL+NENL++I+ + +D E N L+WKCLGYR++ ++ W VFP+W+ YP P DLIG+ R+Y +D+P A Q++ RS+ + KQ + LKP GFTG K ELTPN+TRRAQ N+LL+YRE L+G +EE++ RR Sbjct: 27 FILTREGPPTPEELSNENLLRILRIECSDLEANTLVWKCLGYRFDASSESWLTDEVFPKWRGNYPSPPDLIGMQRIYSKEVDRPSLKANQSIVRSIPADNKQSLKTHLKPYGFTGYKYAELTPNKTRRAQCANWLLFYREELFGYTVEELKERR 180 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig506.13090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig506.13090.1 >prot_L-elsbetiae_contig506.13090.1 ID=prot_L-elsbetiae_contig506.13090.1|Name=mRNA_L-elsbetiae_contig506.13090.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp VAAAKADGGGGAPAAQEGGAGAGAPARVPRSLDRSAPPSFIANVNLDGDFback to top mRNA from alignment at L-elsbetiae_contig506:14736..18036- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig506.13090.1 ID=mRNA_L-elsbetiae_contig506.13090.1|Name=mRNA_L-elsbetiae_contig506.13090.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3301bp|location=Sequence derived from alignment at L-elsbetiae_contig506:14736..18036- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig506:14736..18036- >mRNA_L-elsbetiae_contig506.13090.1 ID=mRNA_L-elsbetiae_contig506.13090.1|Name=mRNA_L-elsbetiae_contig506.13090.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1410bp|location=Sequence derived from alignment at L-elsbetiae_contig506:14736..18036- (Laminarionema elsbetiae ELsaHSoW15)back to top |