prot_L-elsbetiae_contig5059.13087.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5059.13087.1
Unique Nameprot_L-elsbetiae_contig5059.13087.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length126
Homology
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BLAST of mRNA_L-elsbetiae_contig5059.13087.1 vs. uniprot
Match: D7FNJ6_ECTSI (Lon protease homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ6_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 8.360e-23
Identity = 82/133 (61.65%), Postives = 85/133 (63.91%), Query Frame = 0 
Query:    1 MVLSSVLNQGSRFLRSPAVLGAAG-RGAFRNGQQICRAAPSPPAAGAWSNVR-VGVPHRAFWDW--TGKGGDQGVPKGSGGAAESGG---------RSGGDNTGSDGKGNKFGGSNGVGEAAAEEQPPSPGSG 120
            MVLSSVLNQGSR LRSPAVLGAA  RG FR GQQ  R +P   A  AW+ VR VGV HR FWDW  TGKGGDQG  KGS                 R+G        KG K GGSNGVGEAAAEEQPPSPGSG
Sbjct:    1 MVLSSVLNQGSRLLRSPAVLGAAACRGTFR-GQQAQRVSPCAAAPAAWTTVRAVGVHHRTFWDWSGTGKGGDQGSSKGSXXXXXXXXXXXXXXXIPRNG--------KG-KPGGSNGVGEAAAEEQPPSPGSG 123
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5059.13087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNJ6_ECTSI8.360e-2361.65Lon protease homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5059contigL-elsbetiae_contig5059:7484..11610 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5059.13087.1mRNA_L-elsbetiae_contig5059.13087.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5059 7464..11610 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5059.13087.1 ID=prot_L-elsbetiae_contig5059.13087.1|Name=mRNA_L-elsbetiae_contig5059.13087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
MVLSSVLNQGSRFLRSPAVLGAAGRGAFRNGQQICRAAPSPPAAGAWSNV
RVGVPHRAFWDWTGKGGDQGVPKGSGGAAESGGRSGGDNTGSDGKGNKFG
GSNGVGEAAAEEQPPSPGSGGGTAGA
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