prot_L-elsbetiae_contig5033.13056.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5033.13056.1
Unique Name	prot_L-elsbetiae_contig5033.13056.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	312

Homology

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 1.100e-121
Identity = 221/394 (56.09%), Postives = 248/394 (62.94%), Query Frame = 0

Query:    1 MVATQMFLGTAATLIASSAAFVAPMAVRSAA-PAASSSSLRMSAGSDYVATLPGAPFGDGK-----------------------------------------------------------------IFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPL-------FMGKEF------IGPAIEHFQEITAQFPEFWAFALLG-MAFVEY---NTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 311
            MVA+QMF+GTAATLIASS AFVAP+AVRS A    SSSSL MSAGSDYVATLPGAPF DGK                                                                 IFDPL +S+GA P DIKKWREAEIKHGRVAMLASLGV+VAE+  P        F+  E+      IG    +F         +    ++  +A  ++   N +V     P  ++   GA PG+IK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP  EA    M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSD--GAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 2.270e-114
Identity = 193/311 (62.06%), Postives = 206/311 (66.24%), Query Frame = 0

Query:    1 MVATQMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 311
            MVATQ+FLG+AATLIASS AFVAPMAVRSAAPA+SSS+L+MSAGSDYVATLPGAPFGDGKIFDPLN+S+GA+P DIKKWREAEIKHGRVAMLASLGVLVAE+YHPLFMG                                                                                           PDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP+ EA    M+TKELNNGRLAMIGIAGMLVQELINPADILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMG-------------------------------------------------------------------------------------------PDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 7.770e-113
Identity = 186/307 (60.59%), Postives = 204/307 (66.45%), Query Frame = 0

Query:    5 QMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 311
             MFLGTAATLIASS AFVAPMAVRSAAPA+S+S+L+MSAGSDYVATLPGAPFGDGKIFDPL +S+GA                                                                                           EPGEIKLWREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTITKAYA+PS VTGEGGL+++YSPGDLGFDPL +KPK +A    MQTKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    6 NMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGA-------------------------------------------------------------------------------------------EPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 3.410e-105
Identity = 181/310 (58.39%), Postives = 201/310 (64.84%), Query Frame = 0

Query:    1 MVATQMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 310
            MVA+QMFLGTAA LIASS AFVAP+AVRSAAPA+++S+L+MSAGSDYVATLPGAPF DGKIFDPL++S+GA P DIKKWREAEIKHGRVAMLASLG+LVAEEYHPLFMGK+FIGPAI HFQEI+AQFPEFWAF+LLGMAF+EYNTI+TAF +PSAVTGEGG                                                                                           LKEDY PGDLGFDPL +KP  EA    M+TKELNNGRLAMIGIAGML QEL+N  DIL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGG-------------------------------------------------------------------------------------------LKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.080e-97
Identity = 169/307 (55.05%), Postives = 195/307 (63.52%), Query Frame = 0

Query:    5 QMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 311
             MFLGTAATLIASSAAFV PMAVRSAAPA+S+S+L+MSAG+DY+ATLPGA   +GKIFD L +++GA                                                                                           +PGEIKLWREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI KAYA+PS VTGEGGL+++YSPGDLGFDP  IKPK +A    MQ KELNNGRLAMIGI GMLVQEL+N  DILG
Sbjct:    6 NMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGA-------------------------------------------------------------------------------------------DPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 1.610e-84
Identity = 128/168 (76.19%), Postives = 140/168 (83.33%), Query Frame = 0

Query:  144 NTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 311
            N +V     P  ++   GA PG+IK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAF+EYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP  EA    M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:   31 NALVPQIFDPLGLSD--GAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.430e-83
Identity = 124/150 (82.67%), Postives = 136/150 (90.67%), Query Frame = 0

Query:  161 GAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 310
            GAE G+IKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFW FSLL +A IEYNTITKAYA+PS VTGEGGL+++YSPGDLGFDPL +KP  +    TMQTKELNNGRLAMIGIAG LVQEL+NP +IL
Sbjct:   25 GAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 1.410e-79
Identity = 157/311 (50.48%), Postives = 170/311 (54.66%), Query Frame = 0

Query:    1 MVATQMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 311
            MVA+QMF+GTAATLIASS AFVAPMAVRS     SS  L+MSAGSDYVATLPGAPF DGKIFDPL +S+GA P DIKKWREAEIKHGRVAMLASLGV+VAE                            FWAF+LLGMAF+EYNTI+TAF +PSAVTGEGG                                                                                           LKEDY PGDLGFDPL +KP  EA    M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGG-------------------------------------------------------------------------------------------LKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

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BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.720e-68
Identity = 132/309 (42.72%), Postives = 169/309 (54.69%), Query Frame = 0

Query:    4 TQMFLGTAATLIASSAAFVAPMAVR-SAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 311
            T   +G A+   AS  AF+ P     SA P  +S++ RMSAGSDYV+TLPGAPF DGK++DP+ +S  A+P+DIKKWREAEIKHGRVAMLAS+GVLVAE +HPLF+G                                                                                           PDYIGPA+ HF+EI+A++P+FW  +LL +A++EY  I   +A+   VTGEGG++ DY PGDLGFDPLG+ P+ E +   M+TKELN+GRLAMIGI GM+VQEL+ P  I G
Sbjct:   56 TGALVGMASWCFASCEAFIVPTPTTLSARP--TSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLG-------------------------------------------------------------------------------------------PDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

[Close]

BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 3.250e-64
Identity = 135/315 (42.86%), Postives = 171/315 (54.29%), Query Frame = 0

Query:    1 MVATQMFLGTAATLIASSAAFVAPMAV--RSAAPAASSSSLRMSAGSDYVATLPGAPFG---DGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 310
            MV +Q+FLGTAATLIASSAAFVAP+A    S A  A+SS+ +M+AGSDY A+LPGAPFG   +GK FDP  ++   +P+ IKKWREAE+KHGRV+MLA++G+LV+E +HPLFMG                                                                                           P YIGPAV+H Q+I+  YP FWV SL  +AFIE  TI  A+   S VTG G LK +Y PGDLGFDPLG+ PK   DF  +Q++EL+ GR AMIG+ GM+VQE+++   IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMG-------------------------------------------------------------------------------------------PAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JWB4_9PHAE	1.100e-121	56.09	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7G7Q6_ECTSI	2.270e-114	62.06	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S1_ECTSI	7.770e-113	60.59	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	3.410e-105	58.39	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	1.080e-97	55.05	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	1.610e-84	76.19	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	1.430e-83	82.67	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5K8D0_9PHAE	1.410e-79	50.48	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
D7G5B4_ECTSI	1.720e-68	42.72	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7FQG7_ECTSI	3.250e-64	42.86	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 44..161 e-value: 9.7E-16 score: 60.1
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 162..310 e-value: 1.4E-30 score: 108.3
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 50..165 e-value: 1.5E-16 score: 61.4 coord: 162..302 e-value: 1.2E-32 score: 113.7
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 165..305 coord: 9..145
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 165..305 coord: 9..145
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..311
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..22
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.571
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 162..310
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 51..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5033	contig	L-elsbetiae_contig5033:4634..12168 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5033.13056.1	mRNA_L-elsbetiae_contig5033.13056.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5033 3184..12168 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5033.13056.1 ID=prot_L-elsbetiae_contig5033.13056.1|Name=mRNA_L-elsbetiae_contig5033.13056.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MVATQMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVAT
LPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVA
EEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAF
ASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMG
PDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGE
GGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLV
QELINPADILG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln