mRNA_L-elsbetiae_contig5031.13053.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: A0A6H5JD70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD70_9PHAE) HSP 1 Score: 325 bits (832), Expect = 1.790e-104 Identity = 173/203 (85.22%), Postives = 189/203 (93.10%), Query Frame = 1 Query: 43 LARETDRHSIYCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARM---TVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLLDGSGLSTVDEGSERESTNRELHRPSAFINLATTFLYMTNYYIVGPTSAE 642 +ARETDRH+IYC IGRQIAELMRFLQLNVSGLRKILKKHDKQVRDK+IAKNYLSTRA+EKYS+MRQLYNN+GVMALV SLRNAFEVEE Q R+ +VDEERGLL AR RTLSE SCT+GVL++IAN+QRALAEAQ+LTTSKYLSLQVLLDGSGLSTVDEGSE+EST+RELHRPSA+INLATTFLYMTNYYIVGPTSAE Sbjct: 2 IARETDRHAIYCSIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKLIAKNYLSTRAKEKYSSMRQLYNNAGVMALVASLRNAFEVEEGLQIRIHRGSVDEERGLLS-ARAKHRTLSEFSCTEGVLVEIANQQRALAEAQYLTTSKYLSLQVLLDGSGLSTVDEGSEQESTHRELHRPSAYINLATTFLYMTNYYIVGPTSAE 203
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: D8LS38_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS38_ECTSI) HSP 1 Score: 324 bits (831), Expect = 9.400e-104 Identity = 175/215 (81.40%), Postives = 194/215 (90.23%), Query Frame = 1 Query: 7 GDVHSGGGGLVALARETDRHSIYCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARM---TVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLLDGSGLSTVDEGSERESTNRELHRPSAFINLATTFLYMTNYYIVGPTSAE 642 GD +GG +ARETDRH+IYC IG QIAELMRFLQLNVSGLRKILKKHDKQVRDK+IAKNYLSTRA EKYS+MRQLYNN+GVMALV SLRNAFEV+E +Q R+ +VDEERGLL AR RTLSEVSCT+GVL++IAN+QRALAEAQ+LTTSKYLSLQVLLDGSGLS+VDEGSE+EST+RELHRPSA+INLATTFLYMTNYYIVGPTSAE Sbjct: 55 GDAATGG----IIARETDRHAIYCSIGTQIAELMRFLQLNVSGLRKILKKHDKQVRDKLIAKNYLSTRANEKYSSMRQLYNNAGVMALVASLRNAFEVDEGEQIRVHRGSVDEERGLLS-ARAEDRTLSEVSCTEGVLVEIANQQRALAEAQYLTTSKYLSLQVLLDGSGLSSVDEGSEQESTHRELHRPSAYINLATTFLYMTNYYIVGPTSAE 264
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: A0A835YJ60_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ60_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.900e-33 Identity = 90/210 (42.86%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 64 HSIYCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQ----ARMTVDEERGLLQRARTVGRTLSEVSCTQG-------VLIDIANEQRALAEAQHLTTSKYLSL--QVLLD-GSGLSTVDEGSEREST---NRELHRPSAFINLATTFLYMTNYYIVGPTSAE 642 H IG+ + +L+ FLQLNV+GLRKILKKHDKQ+RD+++A NYL +RA+ +YS ++QLY+N G+MALVG+L+ A + E+++ + G + + T L S + G V+ I + L E Q T S YL+L ++LL+ G + +DE SE E R L SA+INLATTFLY+TNYYIVGPT + Sbjct: 148 HKEITAIGQDMVKLLEFLQLNVTGLRKILKKHDKQIRDRLLAANYLCSRARVRYSFLQQLYHNEGIMALVGTLKRALDTVESRKDVGGLQSATRRAFGSVSSSSTSWHDLLMRSTSDGQGSDNHPVVAAITDALSKLHEEQDRTVSDYLTLSSELLLEAGMDPTRMDEMSEAEQEAMKQRTLDPWSAYINLATTFLYLTNYYIVGPTGVQ 357
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: A0A6A5ALS5_9STRA (SPX domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ALS5_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.200e-22 Identity = 66/191 (34.55%), Postives = 112/191 (58.64%), Query Frame = 1 Query: 73 YCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARMTVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLLDGSGLSTVDEGSERESTNRELHRP-SAFINLATTFLYMTNYYIVGPTSAE 642 Y IG ++ +L+ +++LN +GLRKILKKHDK + K I NY+++R + S ++QLY++ G+ A++ S+R A + Q +++ A T+ R++SE + +L I+ ++ L ++ +K ++ Q L+ S LS +E ++ + P S F+N+ +TFLYMTNYYIV PTS E Sbjct: 109 YRDIGEELVKLLYYVELNATGLRKILKKHDKNHKGKKITANYINSRVESNVSHLQQLYHDEGISAIIASIRAALDELRTLQMQVSGTNHEAA---AATLTRSISE---DEPILNRISVARQRLHQSTRY--AKTIAAQALIFDSDLSDDEEEMLLKTIKMQKPSPISRFLNMFSTFLYMTNYYIVAPTSGE 291
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: W4FEE6_9STRA (SPX domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FEE6_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.150e-21 Identity = 66/191 (34.55%), Postives = 112/191 (58.64%), Query Frame = 1 Query: 73 YCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARMTVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLLDGSGLSTVDEGSERESTNRELHRP-SAFINLATTFLYMTNYYIVGPTSAE 642 Y IG ++ +L+ +++LN +GLRKILKKHDK + K I NY+++R + S ++QLY++ G+ A++ S+R A + Q +++ A T+ R++SE + +L I+ ++ L ++ +K ++ Q L+ S LS +E ++ + P S F+N+ +TFLYMTNYYIV PTS E Sbjct: 118 YRDIGEELVKLLYYVELNATGLRKILKKHDKNHKGKKITANYINSRVESNVSHLQQLYHDEGISAIIASIRAALDELRTLQMQVSGTNHEAA---AATLTRSISE---DEPILNRISVARQRLHQSTRY--AKTIAAQALIFDSDLSDDEEEMLLKTIKMQKPSPISRFLNMFSTFLYMTNYYIVAPTSGE 300
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: A0A3R7BUV6_9STRA (SPX domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BUV6_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.300e-21 Identity = 66/191 (34.55%), Postives = 112/191 (58.64%), Query Frame = 1 Query: 73 YCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARMTVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLLDGSGLSTVDEGSERESTNRELHRP-SAFINLATTFLYMTNYYIVGPTSAE 642 Y IG ++ +L+ +++LN +GLRKILKKHDK + K I NY+++R + S ++QLY++ G+ A++ S+R A + Q +++ A T+ R++SE + +L I+ ++ L ++ +K ++ Q L+ S LS +E ++ + P S F+N+ +TFLYMTNYYIV PTS E Sbjct: 222 YRDIGEELVKLLYYVELNATGLRKILKKHDKNHKGKKITANYINSRVESNVSHLQQLYHDEGISAIIASIRAALDELRTLQMQVSGTNHEAA---AATLTRSISE---DEPILNRISVARQRLHQSTRY--AKTIAAQALIFDSDLSDDEEEMLLKTIKMQKPSPISRFLNMFSTFLYMTNYYIVAPTSGE 404
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: A0A418AII7_9STRA (SPX domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AII7_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.860e-21 Identity = 67/193 (34.72%), Postives = 112/193 (58.03%), Query Frame = 1 Query: 73 YCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARMTVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLLDGSGLSTVDEGSERESTNRELHRPS---AFINLATTFLYMTNYYIVGPTSAE 642 Y +G ++ +L+ +++LN +GLRKILKKHDK + K I NY+++R + S ++QLY++ G+ A++ S+R A + Q +++ + T+ R++SE + +L I ++ L ++ +K ++ Q L+ S LS DE E +L +PS F+N+ +TFLYMTNYYIV PTS E Sbjct: 67 YREVGEELVKLLYYVELNATGLRKILKKHDKNHKAKKITANYINSRIESNVSHLQQLYHDEGISAIIASIRAALDELRTLQVQVSTSSQDT---PPSTLSRSISE---DEPILNRITIARQRLHQSTRY--AKTIAAQALIFDSDLS--DEEEELMLKTLKLQKPSHISRFLNMFSTFLYMTNYYIVAPTSGE 249
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: A0A418FFT7_9STRA (SPX domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FFT7_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.000e-21 Identity = 67/193 (34.72%), Postives = 113/193 (58.55%), Query Frame = 1 Query: 73 YCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARMTVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLLDGSGLSTVDEGSERESTNRELHRPSA---FINLATTFLYMTNYYIVGPTSAE 642 Y IG ++ +L+ +++LN +GLRKILKKHDK + K I NY+++R + S ++QLY++ G+ A++ S+R A + Q +++ A T+ R++SE + +L I+ ++ L ++ +K ++ Q L+ S LS D+ E ++ +PS F+N+ +TFLYMTNYYIV PTS E Sbjct: 187 YRDIGEELVKLLYYVELNATGLRKILKKHDKNHKGKKITANYINSRVESNVSHLQQLYHDEGISAIIASIRAALDELRTLQMQVSGTNNEAA---AATLTRSISE---DEPILNRISVARQRLHQSTRY--AKTIAAQALIFDSDLS--DDEEEMLLKTFKMQKPSPISRFLNMFSTFLYMTNYYIVAPTSGE 369
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: K3X6Z1_GLOUD (SPX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6Z1_GLOUD) HSP 1 Score: 100 bits (250), Expect = 4.920e-21 Identity = 69/190 (36.32%), Postives = 111/190 (58.42%), Query Frame = 1 Query: 82 IGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARMTVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLL-DGSGLSTVDEGSERESTNR--ELHRPSAFINLATTFLYMTNYYIVGPTSAE 642 +G + +L+ F++LN +G+RKILKKHDK V++ I +YLS+R + S ++QLY++ G+ A++ ++R+A + E ++ + V + T+ RT+S+ + VL I +R L ++ H K ++ Q L+ DG DE + ES R E S F+N+ TFLYMTNYYIV PTS + Sbjct: 106 VGDDLVQLLHFVELNATGIRKILKKHDKTVKEHKIMGSYLSSRTDSQASHLQQLYHDEGISAIIATIRSA--LTELRKLEVQVATNGNPSAMSLTLVRTISQ---DEPVLNKIQLARRRLHQSTHYV--KTIAAQALIFDGESSEDEDEVAY-ESFKRLGERSEMSRFVNMLCTFLYMTNYYIVAPTSGD 287
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Match: A0A485L9C7_9STRA (Aste57867_18066 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9C7_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.710e-21 Identity = 68/193 (35.23%), Postives = 113/193 (58.55%), Query Frame = 1 Query: 73 YCGIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKMIAKNYLSTRAQEKYSAMRQLYNNSGVMALVGSLRNAFEVEEAQQARMTVDEERGLLQRARTVGRTLSEVSCTQGVLIDIANEQRALAEAQHLTTSKYLSLQVLLDGSGLSTVDEGSERESTNRELHRPSA---FINLATTFLYMTNYYIVGPTSAE 642 Y +G ++ +L+ +++LN +GLRKILKKHDK + K I NY+S+R S ++QLY++ G+ A++ ++R+A + QA+++ GL + + R +SE + VL I ++ L ++ +K ++ Q L+ S +S DE E ++ +PS F+N+ +TFLYMTNYYIV PTS E Sbjct: 112 YREVGDELVKLLYYVELNATGLRKILKKHDKNFKGKKITANYISSRIDANVSHLQQLYHDEGISAIIATIRSALDQLRTLQAQIS-----GL----QPIQRNISE---DEPVLNRITLARQRLHQSTRY--AKTIAAQALIFDSDMS--DEEEEIMYQAFKMQKPSGVSRFLNMLSTFLYMTNYYIVAPTSGE 288 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5031.13053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5031.13053.1 >prot_L-elsbetiae_contig5031.13053.1 ID=prot_L-elsbetiae_contig5031.13053.1|Name=mRNA_L-elsbetiae_contig5031.13053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp GAGDVHSGGGGLVALARETDRHSIYCGIGRQIAELMRFLQLNVSGLRKILback to top mRNA from alignment at L-elsbetiae_contig5031:7864..13042+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5031.13053.1 ID=mRNA_L-elsbetiae_contig5031.13053.1|Name=mRNA_L-elsbetiae_contig5031.13053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5179bp|location=Sequence derived from alignment at L-elsbetiae_contig5031:7864..13042+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5031:7864..13042+ >mRNA_L-elsbetiae_contig5031.13053.1 ID=mRNA_L-elsbetiae_contig5031.13053.1|Name=mRNA_L-elsbetiae_contig5031.13053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig5031:7864..13042+ (Laminarionema elsbetiae ELsaHSoW15)back to top |