prot_L-elsbetiae_contig1009.129.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1009.129.1
Unique Nameprot_L-elsbetiae_contig1009.129.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
BLAST of mRNA_L-elsbetiae_contig1009.129.1 vs. uniprot
Match: A0A6H5JY97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.420e-8
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    2 LLLALFIKPLFAQGDDGRISIRSRHRRTVLRNITCTIGVV-AVQLAEAVVVYTVVYHKGHTEDVERSADVAAVTQVFLTLCFTEITIPLGFAS 93
            LLL LF++PL  + + G  S  + +R  V++NITCTI VV A  +   VV+  ++     +      AD+  +   F+TLC TEI +PLGF+S
Sbjct:  227 LLLILFVRPLLVRLE-GSQSGEAMYRMVVIKNITCTIAVVTAYAVTTVVVIAALIRQSNDSNTASLFADITPLVNQFVTLCLTEIALPLGFSS 318          
BLAST of mRNA_L-elsbetiae_contig1009.129.1 vs. uniprot
Match: D8LN45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 2.140e-6
Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    2 LLLALFIKPLFAQGDDGRI-SIRSRHRRTVLRNITCTIGVV-AVQLAEAVVVYTVVYHKGHTEDVERSADVAAVTQVFLTLCFTEITIPLGFAS 93
            LLLA+F+KPL      G I S  + +RR V+RN+ CTIG+     +   +VV   +     +    + AD+     +F+TLC TE+++PLGF+S
Sbjct:   75 LLLAMFVKPLMI--PQGHIQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCVTEMSLPLGFSS 166          
BLAST of mRNA_L-elsbetiae_contig1009.129.1 vs. uniprot
Match: A0A6H5JPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.300e-5
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    2 LLLALFIKPLFAQGDDGRISIRSRHRRTVLRNITCTIGVV-AVQLAEAVVVYTVVYHKGHTEDVERSADVAAVTQVFLTLCFTEITIPLGFAS 93
            LLLA+F+KPL       + S  + +RR V+RN+ CTI +     +   +VV   +     +    + AD+     +F+TLC TEI++PLGF+S
Sbjct:  206 LLLAMFVKPLMIPQGHTQ-SGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEISLPLGFSS 297          
BLAST of mRNA_L-elsbetiae_contig1009.129.1 vs. uniprot
Match: A0A6H5K249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.420e-5
Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    2 LLLALFIKPLFAQGDDGRISIRSRHRRTVLRNITCTIGVV-AVQLAEAVVVYTVVYHKGHTEDVERSADVAAVTQVFLTLCFTEITIPLGFAS 93
            LLLA+F+KPL       + S  + +RR V+RN+ CTI +     +   +VV   +     +    + AD+     +F+TLC TE+++PLGF+S
Sbjct:  105 LLLAIFVKPLMIPQGHTQ-SGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTELSLPLGFSS 196          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1009.129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JY97_9PHAE1.420e-838.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN45_ECTSI2.140e-637.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPA3_9PHAE1.300e-535.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K249_9PHAE1.420e-534.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..127
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..15
score: 0.588
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 34..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1009contigL-elsbetiae_contig1009:12003..13539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1009.129.1mRNA_L-elsbetiae_contig1009.129.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1009 12001..13539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1009.129.1 ID=prot_L-elsbetiae_contig1009.129.1|Name=mRNA_L-elsbetiae_contig1009.129.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
LLLLALFIKPLFAQGDDGRISIRSRHRRTVLRNITCTIGVVAVQLAEAVV
VYTVVYHKGHTEDVERSADVAAVTQVFLTLCFTEITIPLGFASFFAWALK
KWRPKKDGSGESGQRSCMEVSRNSQTT
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