mRNA_L-elsbetiae_contig5025.13041.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: D8LIV2_ECTSI (Queuosine salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV2_ECTSI) HSP 1 Score: 540 bits (1391), Expect = 2.780e-187 Identity = 292/387 (75.45%), Postives = 320/387 (82.69%), Query Frame = 2 Query: 59 MADMVEKTSETLAGKGGGDGGDEGLMSRVFSTTAVANEAQTVARINEEAMATLVDSGGVPLDKYNRAASRVPLPLKFDDAAQEINFHGLVALLSFGGAHEPELVRLTGSSVEDAAKFGLIGSHLGRERLDATWMKNANVGSISESFKIPVREDAPSTIPGVTVDRPGALVSHAQALCAVLNETGEALLSRGYADLAQFILHSARSDPGVEGLVRSLSGALPAFRDTETVSGSDVIMLKNAQVLAGDLSARMGKAVEDLRFDDCDKLTAVADADVITALTTLGILERTSTAAETXXXXXXXXXXXXXXEP---AAAAPKIDEGVAGPAFKPKDTAALRAVAVQACHRLAASLGDEYRPHELSLYLKRLSRRKEHKDMLRFVPGESRAL 1210 MA M ++ TL GKGG L++RV +T+A A E Q VARIN++AMA +D GGVPLDKY RAASRVPLPLKFDDAAQEINFH L+ALLSFGG+HEPEL+RLTGS+V+DAAKFGLIGSHL RERLDATWMKNA+VGS+SE FKIPVREDAPSTIPGVTVDRPGALVSHAQALC+VLNETGEALLSRGY D+AQFILHSARSDPGVEGLVRSLSGALP F+DTETV+G DV+MLKNAQVLAG+LS+RMGKAVEDLRFDD DKLTAVADADVITALTTLGILE TA T E A +G GPAFKPKDTA LRAVAVQACHR+A SLG +YRPHELSLYLKRLSRRKE+KD RF+P ESRAL Sbjct: 1 MAAMADQQG-TLGGKGG-------LLARVVATSATACEEQQVARINDDAMAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPGFQDTETVNGLDVLMLKNAQVLAGELSSRMGKAVEDLRFDDSDKLTAVADADVITALTTLGILEPAKTATPTGTAETAADGAPREGEEIAETAVGASSADGRVGPAFKPKDTAELRAVAVQACHRMAESLGKDYRPHELSLYLKRLSRRKEYKDAPRFLPRESRAL 379
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: W7U497_9STRA (Queuosine salvage protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U497_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.690e-22 Identity = 83/260 (31.92%), Postives = 125/260 (48.08%), Query Frame = 2 Query: 164 ANEAQTVARINEEAMATLVDSGGVPLDKYNRAASRVPLPLKFDDAAQEINFHGLVALLSFGGAHEPELVRLTG---SSVEDAAKFGLIGSHLGRERLDATWMKNANVGSISESFKIPVREDAP-STIPGVTVDRPGALVSHAQALCAVLNETGEALLSRGYADLAQFILHSARSD--PGVEGLVRSLSGALPA-FRDTETVSGSDVIM----LKNAQVLAGDLSARMGKAVEDLRFDDCDKLTAVADADVITALTTLGIL 910 A+E ++ R++ EA+ L + L + +RV LPLKF E+NFH +++LLSFG A+E + + +G S D FGLIG HL + L A ++ ++ F I E+ P ++P + V+RPG L L +N G L G DLA FIL + R + P V LV +L A P+ F GS K + +LAG+L R+ + + F D + A +IT L + G+L Sbjct: 26 ASERTSIVRVDHEAVGRL--AAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVL 283
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: A0A1C7N5U4_9FUNG (Queuosine salvage protein n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N5U4_9FUNG) HSP 1 Score: 102 bits (253), Expect = 4.140e-20 Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2 Query: 263 SRVPLPLKFDDAAQEINFHGLVALLSFGGAHEPELVRLTGSSVEDAAKFGLIGSHLGRERLDATWMKNANVGSISESFKIPV-REDAPSTIPGVTVDRPGALVSHAQALCAVLNETGEALLSRGYADLAQFILHSARSDP-GVEGLVRSLSGALPAFRDTETVSGSD--VIMLKNAQVLAGDLSARMGK-AVEDLRFDDCDKLTAVADADVITALTTLGIL 910 S + +PL+FD EINF + LL+FG L L DA +FG + H+ + +DA KN + ++E F++P+ RE + VT+ P AL A L AVLN TG+ L+S + DLA FIL+ P LV L A P +D+ + V + K AQ++ L + + E F D D+LT +D + T L LG + Sbjct: 64 STMKMPLRFDTLQDEINFVTFIDLLNFGSGFRVPLHHLADRGAFDAIRFGAMSFHISGKSMDADTFKNMTIFEVAEIFQLPIDREVRHEKLDFVTLTEPTALKPFAAGLTAVLNTTGDYLVSHKHKDLADFILYHVNQKPQDATYLVSQLVQAFPGLQDSYQFPNNPEPVYLYKKAQIIVYHLWFTFREQSPEQFDFKDIDQLTVFSDNVIPTMLIELGAI 284
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: L1ID34_GUITC (Queuosine salvage protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ID34_GUITC) HSP 1 Score: 94.0 bits (232), Expect = 7.630e-17 Identity = 96/337 (28.49%), Postives = 140/337 (41.54%), Query Frame = 2 Query: 131 LMSRVFSTTAVANEAQTVARINEEAMATLVDSGGVPLDKYNRAASRVPLPLKFDDAAQEINFHGLVALLSFGGAHEPEL---VRLTGSSVEDAAKFGLIGSHLGRERLDATWMKNANVGSISESFKIPVREDAPSTIPGVTVDRPGALVSHAQALCAVLNETGEALLSRGYADLAQFILHSA--------RSDPGVEG--LVRSLSGALPAFRDTETVSGSDVIMLKNAQVLAGDLSARMGKAVEDLRFDDCDKLTAVADADVITALTTLGILERTSTAAETXXXXXXXXXXXXXXEPAAAAPKIDEGVAGPAFKPKDTAALRAVAVQACHRLAASL 1102 + S V S T E +V EA+A +++ V R LPL FDD QEINF+ L+A LSFG + + G D+ LI H+ + LDA + ++ ++S++ IP+ ++ + D P +VL+ L SRG+ DLA FIL S SD LV L F+D V S V + + AQ++ DL AR L F D + LT +DA+ +T L L ++E + A A KID A ++ AALR V+AC +LA + Sbjct: 48 IRSTVLSQTEELEELVSVNATAVEALAKDIETWRVK----KSFKVRFGLPLVFDDVKQEINFYALLATLSFGSGWQEGVWSKAPTKGVPTRDSVLNMLISLHMDSKNLDAAGLAEVSLFALSQALDIPLTKEKRLDGGPIRQDVPSDYRWLVDKYYSVLSSLSSDLTSRGFKDLADFILSSRMHGHVRVDESDVNFSASLLVERLVKCFETFQDVANVGQSSVPLHRKAQLVCEDLVARFAAREHRLNFTDMEDLTLGSDAETVTWLRKLSLIEVSP----------------------ALAKKIDSDKEIEAGS-REEAALRVAGVKACMKLAEEI 357
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: A0A0C3AX27_9AGAM (Queuosine salvage protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AX27_9AGAM) HSP 1 Score: 90.1 bits (222), Expect = 1.200e-15 Identity = 67/231 (29.00%), Postives = 110/231 (47.62%), Query Frame = 2 Query: 269 VPLPLKFDDAAQEINFHGLVALLSFGGAHEPELVRLTGSSVEDAAKFGLIGSHLG----RERLDATWMKNANVGSISESFKIPVR---EDAPSTIPGVTVDRPGA-LVSHAQALCAVLNETGEALLSRGYADLAQFILHSARSDPGVEG-------LVRSLSGALPAFRDTETVSGSDVIMLKNAQVLAGDLSARMGKAVED-LRFDDCDKLTAVADADVITALTTLGILE 913 V +PL+F A EIN ++++L+F ++ L + TG D + + G +L + L A +KN G ++E ++ E A TIPG+T+ + G L + VLNETG L++RGY +L +F+LH+ + EG ++ + A PAFRD +G +V + K + L R G A + D +L +D + + L GIL+ Sbjct: 63 VAMPLQFPTVASEINVISVLSILNFAHSYRVPLKKATGRGAYDTMRALIFGLYLSSNDEEDLLSAKGLKNLTSGRVAELMQLSGHLHIEQAHPTIPGLTIGQLGGPLYELVTEVTNVLNETGAILVTRGYPNLGEFVLHALKMGQTSEGGPVDPEVVLDEVIRAFPAFRDVGVYNGKEVFVFKKVLFMLHALVMRFGNATPPKIPLPDTSQLPIFSDNVIPSMLVHFGILD 293
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: A0A7S1XYU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYU2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 8.270e-15 Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 2 Query: 275 LPLKFDDAAQEINFH---------GLVALLSFGGAHEPELVRLTGSSVEDAAKFGLIGSHLGRERLDATWMKNANVGSISESFKIPVREDAP--STIPGVTVDRPGALVSHAQALCAVLNETGEALLSRGYADLA 646 +PL FD A QE NFH G V L FG + L R TG+ V D FGLIG HL R +DA ++ ++ +P++ P S + G+ V+RPG L + + A+LN TG A ++GY D+A Sbjct: 1 MPLHFDTARQEANFHAVAAGVLGSGSVGLRWFGA--DRRLYRATGNDVADTVMFGLIGMHLSRVEVDAEKLEEIKPFDLATYLNVPIQVSVPISSEMDGIYVERPGPLAPLVEDMAALLNHTGRAASAQGYGDVA 133
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: I2CQ69_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ69_NANGC) HSP 1 Score: 64.3 bits (155), Expect = 7.770e-9 Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 2 Query: 164 ANEAQTVARINEEAMATLVDSGGVPLDKYNRAASRVPLPLKFDDAAQEINFHGLVALLSFGGAHEPELVRLTG---SSVEDAAKFGLIGSHLGRERLDATWM 460 A+E ++ R++ EA+ L + L + +RV LPLKF E+NFH L++LLSFG A+E + + +G S D FGLIG HL + L A ++ Sbjct: 26 ASERTSIVRVDHEAVGRL--AAQFSLSEIRDKVARVGLPLKFPRPLDELNFHALLSLLSFGRAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFL 125
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: D7FL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL83_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 8.140e-9 Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 2 Query: 764 MLKNAQVLAGDLSARMGKAVEDLRFDDCDKLTA 862 MLKNAQVLAG+LS+RMGKAVEDLRFDD DKLTA Sbjct: 1 MLKNAQVLAGELSSRMGKAVEDLRFDDSDKLTA 33
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Match: A9V7W4_MONBE (Queuosine salvage protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7W4_MONBE) HSP 1 Score: 62.0 bits (149), Expect = 1.090e-6 Identity = 38/116 (32.76%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 275 LPLKFDDAAQEINFHGLVALLSFGGAHEPELVRL-TGSSVEDAAKFGLIGSHLGRERLDATWMKNANVGSISESFKIPVREDAPST--IPGVTVDRPGALVSHAQALCAVLNETGE 613 +PL+FD A QE NFH L+A LS L++ TG + + FG++G ++ ++L + + + ++SE F++P+R++A +T +P V P L AQ L VL+E + Sbjct: 40 MPLRFDSAEQEANFHALMAALSACAMGYDALLQAHTGRGLRELVLFGVMGLYISGQQLTTSALAELTLENVSELFQLPLRDEAGATTVMPAVQSVPPHPLAPLAQRLLEVLHELAD 155 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5025.13041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5025.13041.1 >prot_L-elsbetiae_contig5025.13041.1 ID=prot_L-elsbetiae_contig5025.13041.1|Name=mRNA_L-elsbetiae_contig5025.13041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=385bp MADMVEKTSETLAGKGGGDGGDEGLMSRVFSTTAVANEAQTVARINEEAMback to top mRNA from alignment at L-elsbetiae_contig5025:1341..10728+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5025.13041.1 ID=mRNA_L-elsbetiae_contig5025.13041.1|Name=mRNA_L-elsbetiae_contig5025.13041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9388bp|location=Sequence derived from alignment at L-elsbetiae_contig5025:1341..10728+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5025:1341..10728+ >mRNA_L-elsbetiae_contig5025.13041.1 ID=mRNA_L-elsbetiae_contig5025.13041.1|Name=mRNA_L-elsbetiae_contig5025.13041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2310bp|location=Sequence derived from alignment at L-elsbetiae_contig5025:1341..10728+ (Laminarionema elsbetiae ELsaHSoW15)back to top |