prot_L-elsbetiae_contig5023.13039.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5023.13039.1
Unique Nameprot_L-elsbetiae_contig5023.13039.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length165
Homology
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BLAST of mRNA_L-elsbetiae_contig5023.13039.1 vs. uniprot
Match: D8LSA3_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA3_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 2.630e-64
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 0 
Query:    1 MSSIGMLDDRVQSISALIDTDIGEKKSRTKKGAQKSGTQPLTAAPEAEEEEGPVPDGWRTPEIRALEDQINSRVDLVLRMADEKWRLAQHAYDRLDVNIRXXXXXXXXXXXXXXRQGLLPPREVAT--PSRKRRRTGAKKADEPESEWLGLSLSERV 155
            M+SIG LDDRVQSISALID+DIGEK SRTKKGA K+        P+A   EGPVPDGWRTPEIRALEDQINSR+DLVLRMADEKWRLAQHAYDRLDVNIRXXXXXXXXXXXXX RQGL+PPREV+   PSRKRRR+GA+K DEP+S+WLGLSLSERV
Sbjct:    1 MTSIGQLDDRVQSISALIDSDIGEK-SRTKKGAPKT-------RPQARATEGPVPDGWRTPEIRALEDQINSRIDLVLRMADEKWRLAQHAYDRLDVNIRXXXXXXXXXXXXXRRQGLIPPREVSATPPSRKRRRSGAEKTDEPDSDWLGLSLSERV 149
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BLAST of mRNA_L-elsbetiae_contig5023.13039.1 vs. uniprot
Match: A0A6H5L498_9PHAE (Inhibitor of growth protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L498_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 9.910e-58
Identity = 128/191 (67.02%), Postives = 139/191 (72.77%), Query Frame = 0 
Query:    1 MSSIGMLDDRVQSISALIDTDIGE-----------------------------------KKSRTKKGAQKSGTQPLTAAPEAEEEEGPVPDGWRTPEIRALEDQINSRVDLVLRMADEKWRLAQHAYDRLDVNIRXXXXXXXXXXXXXXRQGLLPPREVAT--PSRKRRRTGAKKADEPESEWLGLSLSER 154
            M+SIG+LDDRVQSISALID+DIGE                                   KKSRTKKGA K+        P+A   +GPVPDGWRTPEIRALEDQINSR+DLVLRMADEKWRLAQHAYDRLDVNIRXXXXXXXXXXXXX RQGLLPPREV+   PSRKRRR+GA+K DEPES+WLGLSLSER
Sbjct:   23 MTSIGLLDDRVQSISALIDSDIGEVARARQRYYAQFDSSNNSGDDDSGGESHPPRTGRAKKSRTKKGAPKT-------RPQARATKGPVPDGWRTPEIRALEDQINSRIDLVLRMADEKWRLAQHAYDRLDVNIRXXXXXXXXXXXXXRRQGLLPPREVSATPPSRKRRRSGAEKTDEPESDWLGLSLSER 206
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5023.13039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSA3_ECTSI2.630e-6480.89PHD finger protein-related n=1 Tax=Ectocarpus sili... [more]
A0A6H5L498_9PHAE9.910e-5867.02Inhibitor of growth protein n=1 Tax=Ectocarpus sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024610Inhibitor of growth protein, N-terminal histone-bindingPFAMPF12998INGcoord: 63..107
e-value: 2.0E-5
score: 25.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5023contigL-elsbetiae_contig5023:1172..6598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5023.13039.1mRNA_L-elsbetiae_contig5023.13039.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5023 1172..6598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5023.13039.1 ID=prot_L-elsbetiae_contig5023.13039.1|Name=mRNA_L-elsbetiae_contig5023.13039.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=165bp
MSSIGMLDDRVQSISALIDTDIGEKKSRTKKGAQKSGTQPLTAAPEAEEE
EGPVPDGWRTPEIRALEDQINSRVDLVLRMADEKWRLAQHAYDRLDVNIR
RLDADLGRMETDLRRQGLLPPREVATPSRKRRRTGAKKADEPESEWLGLS
LSERVREAQIYVHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024610ING_N_histone_binding