mRNA_L-elsbetiae_contig5015.13027.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5015.13027.1
Unique NamemRNA_L-elsbetiae_contig5015.13027.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: A0A6H5K305_9PHAE (Phosphatidate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K305_9PHAE)

HSP 1 Score: 462 bits (1189), Expect = 3.330e-154
Identity = 229/296 (77.36%), Postives = 250/296 (84.46%), Query Frame = 1
Query:    1 EGLAIVRDEVTEVLLEAEKGGGESLRRRQWGVFWVLGLALVXXXXXXXXXXXVDPSPWMAAFCRWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFAARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFSKTVQLPWLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI 888
            EG+AIVRD V+ VLLE EKGG +SLRR+QWGV WVLG A+             +PS WM AFCRWHVP CAALYVGLLL FI +LRSP LI+YQLGQL+AAH A F VLPSALVSFAAR GL+WFVI SASVIINDI AYICGR+FGRTPLTVLSPKKTREGFVGAALCTS+TGWL GRWL GVDWL + RNV+L G+G   +D G+IF KT QLPW+ +MVS+AEIHAFWIALMASLIGPFGGF ASGLKRAY VKDFGDTIPGHGGAGDRFDCQVMLLPLV+FYLKAFAP LDI
Sbjct:  155 EGMAIVRDGVSGVLLETEKGGAKSLRRQQWGVLWVLGFAVYGRMLVKEIAGVAEPSTWMVAFCRWHVPGCAALYVGLLLWFINTLRSPLLIMYQLGQLSAAHFASFLVLPSALVSFAARGGLFWFVIASASVIINDITAYICGRLFGRTPLTVLSPKKTREGFVGAALCTSLTGWLTGRWLCGVDWLTASRNVILAGQGGP-VDAGDIFLKTAQLPWVNIMVSKAEIHAFWIALMASLIGPFGGFFASGLKRAYGVKDFGDTIPGHGGAGDRFDCQVMLLPLVFFYLKAFAPDLDI 449          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: A0A836CLK4_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK4_9STRA)

HSP 1 Score: 264 bits (674), Expect = 8.360e-80
Identity = 136/245 (55.51%), Postives = 172/245 (70.20%), Query Frame = 1
Query:  166 SPWMAAFCRWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFAARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGR-WLGGVDWLISPRNVMLLGRGETTMDVGNIFSKTVQLPW---LELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI 888
             P ++AF RWH+PA AALY+G+ + FI SL+      YQLGQ AAAH A F  L S LVSFA RAG++WF + S  VI+NDI AY+CG +FG+T LTVLSP+KTREGF+GAA+ T+ T  ++ + WL    W+  P NVML  RG  T       S+ + LP     EL ++RA++HA  I+L+ SLIGPFGGF AS +KRAY  KDFG++IPGHGG  DRFDCQV+LLPLVYFY+KA  P L +
Sbjct:   30 GPVLSAFVRWHLPATAALYMGIFISFIFSLQMRQSYSYQLGQFAAAHYATFICLSSTLVSFAMRAGMFWFALPSLLVIVNDIAAYLCGCMFGKTQLTVLSPRKTREGFIGAAVVTAFTAMILAQSWLSS-PWIFEPSNVML--RGTMTEIAPTKMSEFLYLPLGGNYELQLTRAQVHALGISLLVSLIGPFGGFFASAVKRAYGAKDFGNSIPGHGGVADRFDCQVLLLPLVYFYIKACCPDLGV 271          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: B9RXC8_RICCO (Phosphatidate cytidylyltransferase n=2 Tax=Euphorbiaceae TaxID=3977 RepID=B9RXC8_RICCO)

HSP 1 Score: 187 bits (474), Expect = 5.510e-49
Identity = 97/246 (39.43%), Postives = 141/246 (57.32%), Query Frame = 1
Query:  190 RWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFA-ARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFSKTVQL---------PWLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI*ID 897
            ++H+  C  LY+   + FI +L+   +  YQ GQ A  H+    V   +  + A    G++WF++ ++ ++INDI AYICG  FGRTPL  LSPKKT EGF+GA++ T I+ +++   +G   WL  PR    L  G    D G +F     +         PW E+ +   + HA W+ L AS+I PFGGF ASG KRA+ +KDFGD+IPGHGG  DR DCQ+++    Y Y ++F     I ++
Sbjct:  147 KYHMAMCYFLYIAGFMWFILTLKKK-MYKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPKKTWEGFIGASVTTMISAFVLANMMGRFQWLTCPRKD--LSSGWLQCDPGPLFKPEYFILPEWVPQWFPWKEISILPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVPQSISVE 389          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: S8DLW9_9LAMI (Phosphatidate cytidylyltransferase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DLW9_9LAMI)

HSP 1 Score: 184 bits (466), Expect = 2.000e-48
Identity = 100/238 (42.02%), Postives = 136/238 (57.14%), Query Frame = 1
Query:  175 MAAFCRWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFAAR-AGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFSKTV---------QLPWLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFY 858
            +  F ++H+  C  LY+   + FI SL+   +  YQ GQ A  H+    V   +  + A    G++WF++ ++ +IINDI AYI G  FGRTPL  LSPKKT EGF+GA++ T I+ +L+   LGG  WL  PR    L       D G +F              LPW E+ +   + HA W+ L AS+I PFGGF ASG KRA+ +KDFGD+IPGHGG  DR DCQ+++    Y Y
Sbjct:  134 VGVFIKYHMVTCYFLYITGFIWFILSLKKR-MYKYQFGQYAWTHMILIVVFAQSSFTVAIIFEGIFWFLLPASLIIINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTIISAFLLANILGGFQWLTCPRRD--LSTSWLRCDPGLLFKPEYFAFPEWFPKWLPWSEIAILPVQWHAIWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIY 368          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: A0A7C9DKJ5_OPUST (Phosphatidate cytidylyltransferase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DKJ5_OPUST)

HSP 1 Score: 185 bits (469), Expect = 2.650e-48
Identity = 96/247 (38.87%), Postives = 142/247 (57.49%), Query Frame = 1
Query:  190 RWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFA-ARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFSKTVQ--------LPWLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI*IDGL 903
            ++H+  C  LY+  ++ FI +L+   +  YQ GQ A  H+    V   +  + A    G++WF++ ++ ++INDI AY+ G  FGRTPL  LSPKKT EGF+GA++ T I+ +L+  +LG  +WL  PR    L  G    D G +F              PW E+ +   + HA W+ L AS+I PFGGF ASG KRA+ +KDFGD+IPGHGG  DR DCQ+++    Y Y ++F       ++ +
Sbjct:  146 KYHMVICYFLYIAGIIWFILTLKKK-MYKYQFGQFAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIAAYLFGFFFGRTPLIKLSPKKTWEGFIGASVATIISAFLLANFLGRFEWLTCPRKD--LSTGWLHCDPGPLFKPEHYHIPWVPNWFPWKEISILPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVKPQSFSVEAI 389          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: UPI00053C250B (phosphatidate cytidylyltransferase 1 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C250B)

HSP 1 Score: 184 bits (466), Expect = 8.000e-48
Identity = 102/248 (41.13%), Postives = 142/248 (57.26%), Query Frame = 1
Query:  190 RWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFA-ARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFSKTV---------QLPWLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI*IDGL 903
            ++H+  C  LY+   + FI SL+   +  YQ GQ A  H+    V   +  + A    G++WF++ ++ +IINDI AYI G  FGRTPL  LSPKKT EGF+GA++ T I+ +L+   LG   WL  PR    L  G    D G +F               PW E+MV   + HA  + L AS+I PFGGF ASG KRA+ +KDFGD+IPGHGG  DR DCQ+++    Y YL++F  +  + +D +
Sbjct:  148 KYHMAICYFLYIIGFMWFILSLKKK-MYKYQFGQYAWTHMILIIVFTQSAFTVANIFEGIFWFLLPASLIIINDIFAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTIISAFLLADILGRFPWLTCPRQD--LSTGWLHCDPGPLFKPEPFTLPAWIPEWFPWKEIMVLPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYLQSFIVSQSLSVDKI 392          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: A0A7C8ZT41_OPUST (Phosphatidate cytidylyltransferase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZT41_OPUST)

HSP 1 Score: 182 bits (463), Expect = 1.680e-47
Identity = 96/238 (40.34%), Postives = 143/238 (60.08%), Query Frame = 1
Query:  175 MAAFCRWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFA-ARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFS-KTVQLP----WLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAF 870
            +++  ++H+  C +LY+   + FI +L+   +  YQ GQ A  H+    V   +  + A    G++WF++ ++ ++INDI AY+CG  FGRTPL  LSPKKT EGF+GA++ T I+ +L+   +G  +WL  PR    L  G    D G  F  ++  LP    W E+ +   + HA  + L AS+I PFGGF ASG KRA+ +KDFGD+IPGHGG  DR DCQ+++    Y Y ++F
Sbjct:  140 VSSLIKYHMVICYSLYIAGFMWFILTLKKK-MYKYQFGQYAWTHMILIVVFTQSAFTVANIFEGIFWFLLPASLIVINDIAAYLCGFFFGRTPLIKLSPKKTWEGFIGASVATIISAFLLANVMGQFEWLTCPRTD--LSAGWLHCDPGPFFKPESYNLPSWSPWKEISIMPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSF 374          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: CDS2_ARATH (Phosphatidate cytidylyltransferase 2 n=21 Tax=Brassicaceae TaxID=3700 RepID=CDS2_ARATH)

HSP 1 Score: 182 bits (463), Expect = 1.920e-47
Identity = 98/248 (39.52%), Postives = 142/248 (57.26%), Query Frame = 1
Query:  190 RWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFA-ARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFSKTVQ---------LPWLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI*IDGL 903
            ++H+  C +LY+   + FI +L+   +  YQ  Q A  H+    V   +  + A    G++WF++ ++ ++INDI AYICG  FGRTPL  LSPKKT EGF+GA++ T I+ +L+   +G   WL  PR    L  G    D G +F +            LPW E+ +   + HA  + L AS+I PFGGF ASG KRA+ +KDFGD+IPGHGG  DR DCQ+++    Y Y ++F     + +D L
Sbjct:  148 KYHMAICYSLYISGFVWFILTLKKK-MYKYQFSQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPKKTWEGFIGASITTVISAFLLANIMGRFLWLTCPRED--LSTGWLLCDPGPLFKQETHALPGWISDWLPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVPEVLSVDKL 392          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: A0A1Y1IMY6_KLENI (Phosphatidate cytidylyltransferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMY6_KLENI)

HSP 1 Score: 182 bits (461), Expect = 6.220e-47
Identity = 106/254 (41.73%), Postives = 139/254 (54.72%), Query Frame = 1
Query:  184 FCRWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFA-ARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFS-KTVQLP------------WLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI*IDGL 903
            F R+H   C +LY+G  + FI SL+   L  YQ GQ A  H+  F V   +  + A    G+ WF++  A +IINDI AY+ G  FGRTPL  LSPKKT EGF+GA+  T    +L+   LG   W+  PR    L  G  T D G +F  + ++LP            W        +IHA    LMAS I PFGGF ASG KRA+ +KDFGD+IPGHGG  DR DCQ+++    Y Y ++F     + +D L
Sbjct:  167 FLRYHTLICYSLYIGSTITFILSLKKG-LYQYQFGQYAWTHMILFVVFTQSAFTVANVYEGILWFLLPVALIIINDISAYLVGFFFGRTPLIKLSPKKTWEGFIGASFITMAAAFLLAGILGRYQWMTCPRTD--LSTGWLTCDPGELFVLRHLKLPRFLEALLPDWFRWQSWTYLPIQIHALAYGLMASSIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVAAYIYYQSFIAHRRLSVDSL 417          
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Match: A0A251S7L6_HELAN (Phosphatidate cytidylyltransferase n=10 Tax=Asteraceae TaxID=4210 RepID=A0A251S7L6_HELAN)

HSP 1 Score: 181 bits (458), Expect = 8.400e-47
Identity = 101/248 (40.73%), Postives = 144/248 (58.06%), Query Frame = 1
Query:  175 MAAFCRWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFVLPSALVSFA-ARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKKTREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNIFS-KTVQLP--------WLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKDFGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI 888
            +A   ++H+  C  LY+   + FI SL+   +  YQ GQ A  H+    V   +  + A    G++WF++ ++ ++INDI AYI G  FG+TPL  LSPKKT EGF+GA++ T I+ +L+  +LG   WL  PR    L  G    D G +F+ +T  LP        W E+ V   + HA  + L AS+I PFGGF ASG KRA+ +KDFGD+IPGHGG  DR DCQ+++    Y Y ++F  A  +
Sbjct:  136 VANLIKYHMVTCYFLYIAGFVWFILSLKKK-MYKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIAAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTTIISAFLLANFLGRFQWLTCPRKD--LSTGWLQCDPGPLFTPETFALPGWLPEWFPWTEIHVLPVQWHALALGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIYHQSFIVAQSV 380          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5015.13027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K305_9PHAE3.330e-15477.36Phosphatidate cytidylyltransferase n=2 Tax=Ectocar... [more]
A0A836CLK4_9STRA8.360e-8055.51Phosphatidate cytidylyltransferase n=1 Tax=Tribone... [more]
B9RXC8_RICCO5.510e-4939.43Phosphatidate cytidylyltransferase n=2 Tax=Euphorb... [more]
S8DLW9_9LAMI2.000e-4842.02Phosphatidate cytidylyltransferase (Fragment) n=1 ... [more]
A0A7C9DKJ5_OPUST2.650e-4838.87Phosphatidate cytidylyltransferase n=1 Tax=Opuntia... [more]
UPI00053C250B8.000e-4841.13phosphatidate cytidylyltransferase 1 isoform X1 n=... [more]
A0A7C8ZT41_OPUST1.680e-4740.34Phosphatidate cytidylyltransferase n=1 Tax=Opuntia... [more]
CDS2_ARATH1.920e-4739.52Phosphatidate cytidylyltransferase 2 n=21 Tax=Bras... [more]
A0A1Y1IMY6_KLENI6.220e-4741.73Phosphatidate cytidylyltransferase n=1 Tax=Klebsor... [more]
A0A251S7L6_HELAN8.400e-4740.73Phosphatidate cytidylyltransferase n=10 Tax=Astera... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5015contigL-elsbetiae_contig5015:4980..13280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.3
Seed ortholog evalue8e-110
Seed eggNOG ortholog2880.D7FP19
Preferred nameCDS1
KEGG rclassRC00002
KEGG koko:K00981,ko:K08818
KEGG ReactionR01799
KEGG Pathwayko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070
KEGG ModuleM00093
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004142,GO:0004605,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005783,GO:0005789,GO:0006139,GO:0006220,GO:0006221,GO:0006575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006656,GO:0006657,GO:0006658,GO:0006661,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0007602,GO:0007603,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009266,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009628,GO:0009653,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010511,GO:0010513,GO:0010562,GO:0010866,GO:0010868,GO:0010883,GO:0012505,GO:0016020,GO:0016021,GO:0016024,GO:0016056,GO:0016740,GO:0016772,GO:0016779,GO:0016780,GO:0017169,GO:0018130,GO:0019216,GO:0019220,GO:0019222,GO:0019438,GO:0019637,GO:0019866,GO:0019953,GO:0022412,GO:0022414,GO:0023052,GO:0030133,GO:0030154,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031410,GO:0031966,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0034641,GO:0034654,GO:0040007,GO:0040011,GO:0042175,GO:0042330,GO:0043052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045833,GO:0045834,GO:0045937,GO:0046341,GO:0046470,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0046488,GO:0046889,GO:0046890,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051055,GO:0051174,GO:0051606,GO:0051704,GO:0051716,GO:0055086,GO:0065007,GO:0065008,GO:0070085,GO:0070319,GO:0070382,GO:0070567,GO:0071071,GO:0071073,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0080186,GO:0090207,GO:0090209,GO:0090407,GO:0097164,GO:0097708,GO:0098827,GO:0099503,GO:0104004,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903725,GO:1903727,GO:1905952
EggNOG free text desc.phosphatidate cytidylyltransferase activity
EggNOG OGsCOG0575@1,KOG1440@2759
EC2.7.11.22,2.7.7.41
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03041
Ec32 ortholog descriptionphosphatidate cytidylyltransferase
Ec32 orthologEc-05_001740.1
Exons9
Model size2036
Cds size717
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816505.495922-UTR-L-elsbetiae_contig5015:4979..61241622816505.495922-UTR-L-elsbetiae_contig5015:4979..6124Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5015 4980..6124 -
1691683608.3468068-UTR-L-elsbetiae_contig5015:4979..61241691683608.3468068-UTR-L-elsbetiae_contig5015:4979..6124Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5015 4980..6124 -
1622816505.6051984-UTR-L-elsbetiae_contig5015:12515..125301622816505.6051984-UTR-L-elsbetiae_contig5015:12515..12530Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5015 12516..12530 -
1691683608.4282217-UTR-L-elsbetiae_contig5015:12515..125301691683608.4282217-UTR-L-elsbetiae_contig5015:12515..12530Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5015 12516..12530 -
1622816505.6202106-UTR-L-elsbetiae_contig5015:13002..130441622816505.6202106-UTR-L-elsbetiae_contig5015:13002..13044Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5015 13003..13044 -
1691683608.4362295-UTR-L-elsbetiae_contig5015:13002..130441691683608.4362295-UTR-L-elsbetiae_contig5015:13002..13044Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5015 13003..13044 -
1622816505.6322885-UTR-L-elsbetiae_contig5015:13163..132801622816505.6322885-UTR-L-elsbetiae_contig5015:13163..13280Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5015 13164..13280 -
1691683608.4445672-UTR-L-elsbetiae_contig5015:13163..132801691683608.4445672-UTR-L-elsbetiae_contig5015:13163..13280Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5015 13164..13280 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816505.5068996-CDS-L-elsbetiae_contig5015:6124..62301622816505.5068996-CDS-L-elsbetiae_contig5015:6124..6230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 6125..6230 -
1691683608.3586404-CDS-L-elsbetiae_contig5015:6124..62301691683608.3586404-CDS-L-elsbetiae_contig5015:6124..6230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 6125..6230 -
1622816505.518031-CDS-L-elsbetiae_contig5015:6827..69201622816505.518031-CDS-L-elsbetiae_contig5015:6827..6920Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 6828..6920 -
1691683608.3677256-CDS-L-elsbetiae_contig5015:6827..69201691683608.3677256-CDS-L-elsbetiae_contig5015:6827..6920Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 6828..6920 -
1622816505.52869-CDS-L-elsbetiae_contig5015:9353..94301622816505.52869-CDS-L-elsbetiae_contig5015:9353..9430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 9354..9430 -
1691683608.3779123-CDS-L-elsbetiae_contig5015:9353..94301691683608.3779123-CDS-L-elsbetiae_contig5015:9353..9430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 9354..9430 -
1622816505.54654-CDS-L-elsbetiae_contig5015:9979..101151622816505.54654-CDS-L-elsbetiae_contig5015:9979..10115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 9980..10115 -
1691683608.3919766-CDS-L-elsbetiae_contig5015:9979..101151691683608.3919766-CDS-L-elsbetiae_contig5015:9979..10115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 9980..10115 -
1622816505.5630665-CDS-L-elsbetiae_contig5015:10894..110021622816505.5630665-CDS-L-elsbetiae_contig5015:10894..11002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 10895..11002 -
1691683608.4026792-CDS-L-elsbetiae_contig5015:10894..110021691683608.4026792-CDS-L-elsbetiae_contig5015:10894..11002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 10895..11002 -
1622816505.5770674-CDS-L-elsbetiae_contig5015:11550..116461622816505.5770674-CDS-L-elsbetiae_contig5015:11550..11646Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 11551..11646 -
1691683608.4112704-CDS-L-elsbetiae_contig5015:11550..116461691683608.4112704-CDS-L-elsbetiae_contig5015:11550..11646Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 11551..11646 -
1622816505.5899794-CDS-L-elsbetiae_contig5015:12414..125151622816505.5899794-CDS-L-elsbetiae_contig5015:12414..12515Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 12415..12515 -
1691683608.4197664-CDS-L-elsbetiae_contig5015:12414..125151691683608.4197664-CDS-L-elsbetiae_contig5015:12414..12515Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5015 12415..12515 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5015.13027.1prot_L-elsbetiae_contig5015.13027.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5015 6125..12515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5015.13027.1

>prot_L-elsbetiae_contig5015.13027.1 ID=prot_L-elsbetiae_contig5015.13027.1|Name=mRNA_L-elsbetiae_contig5015.13027.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
MAAFCRWHVPACAALYVGLLLQFIASLRSPPLIVYQLGQLAAAHLACFFV
LPSALVSFAARAGLYWFVIGSASVIINDIMAYICGRIFGRTPLTVLSPKK
TREGFVGAALCTSITGWLIGRWLGGVDWLISPRNVMLLGRGETTMDVGNI
FSKTVQLPWLELMVSRAEIHAFWIALMASLIGPFGGFLASGLKRAYNVKD
FGDTIPGHGGAGDRFDCQVMLLPLVYFYLKAFAPALDI*
back to top

mRNA from alignment at L-elsbetiae_contig5015:4980..13280-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5015.13027.1 ID=mRNA_L-elsbetiae_contig5015.13027.1|Name=mRNA_L-elsbetiae_contig5015.13027.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8301bp|location=Sequence derived from alignment at L-elsbetiae_contig5015:4980..13280- (Laminarionema elsbetiae ELsaHSoW15)
GAGGGCTTGGCAATCGTGCGCGACGAAGTGACGGAGGTGCTGCTGGAAGC GGAAAAGGGGGGGGGGGAGTCGCTCCGCCGGCGGCAGTGGGGGGTGTTCT GGGTGCTCGGGCTCGCCGTGTACGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGCGGGGGGGGTTTTT TTTTTTTTTTTTTTCGCGGTCCGTGGCCTCGAGAAGTTGGTTGTGGTTGT GGTCGTGGTCGTGGTCGTGGTCGTGGTTGTGGTTGTGGTTGTGGTCAGTC GTGTACGCACGTTGTTTGTTTTAGGTCTCGCTCGTGGCGTGTGTTTCTAC GTGTTGTGTGTGTTTCCTCGCGTCTCCAATCAGGGTCCCGACGAAAACGT TGAAGTGCAAGTCAACCCTTGCCCCCGCATGACTACAGAAGCAGATGAAG CACGAAGTACAACAACCGTCCCAGTTTTACCCCCCCCCCCCCCCCCCCCC CCCCACCCCCCCACCCCCCCCCCCCCCTATCGCCTTTGTCGCGCTCCCGT TTGTCTGTCACNNNNNNNNNNTGCCAGCAAACCCTTGCCCCCGCATGACC ACAGAACAAGAGGAAGAACAAAAAACAACAACCGTCCCCGTTTTCCCCCC CCCCCCCCCCCCTAGAATATCCCCCATTCAAGAGCCATTTTATTTGATCC CTGGTAGCCTTGGTCGTACCTCAGAAGTGCCGTAACCCTCTTTGGTGCAG GACCCCTCTCCGTGGATGGCAGCGTTCTGCCGGTGGCACGTCCCGGCCTG TGCTGCACTGTACGTGGGGCTACTGCTGCAGTTCATCGCCAGCTTGCGGA GCCCCCCGCTAATCGTGTAAGTGTGTACAGTAGTAGATGTACATACCATC CGTTGCGGCCGTGAGGTCGAGCCCGTGTTGTAGTGGCGTGGATTCGGGCG CCCTGGGTTTTAGCAAGCCTTCTTGAGGTCTGCTTTTGGGGGGGGTGGGG TGGGGGTGGGGGGGGGCGGGGGTCTTGCCGTCGGTGGTCGCGTGGGCTCG GCTTTTTTTTAGTGTTTTTTTTTTTCTTTCTTAGTATTTAGATATTTTGT TGGCTTCTGCGCCTTTTTTTTGTATTCCGACACTTCCATAGAGCCCGTGT CCGAGCTTATGTATTAGAATCGTGATATACAAATGTATATATGGATGTAC TTCGAGTATATGTATGTATGCATCCAAGGAGAGATGTCGTATCGCGGCGT GGTGTTCATATGTAAATTGTCAAAAACAATACATATAGAAGTATAATTTG AACGCCTTTGATGTCTTCTATTTTCGGCGGCGGAGCATGGTGACTTGCTG CTACCGGGCTTTTTCTGCACGATACGTGAACATATACTTCGAAGTATACA TAATACCCACGGCGAGAACACGCGCACGCACATCTACGCTTCTGTTGGTC GTGGTTCGGCTTTGACACGCCGCTGCTCGCTGGCCAACCCAGCAACCCAG GTTCTGTTGTGGCCAGTTCCGCCCCTTTGTTCTGTTCTTTTTTTTGTCAC GATCGTCAACGACGAATTTTCTTGGAATTTTCCATCAATCAGCGGCGAAA ATACATCCCATCCCGTCCCACCCCATCCGAGCAGGTACCAGTTAGGGCAA CTGGCCGCGGCGCACCTCGCCTGCTTCTTTGTGCTCCCCTCCGCCCTCGT TTCCTTCGCGGCGAGAGCTGGTCTCTACTGGTGCGAGCACCTGTCACATT GTTCTTGATGTTGTTCGTTTGTTGCGTATCCTGTTGCTGGTGTTGTTGCT GTCGGTGGTAGTGGTGGTGGCGGCGTTGCTTTTGCTGTCGTCGTTGGTAT CGTTGCTGTTATTGTTAGGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTGTTTGTCTTTAAAACTGACTTATTTCTTGCGCTTCGTTTTGAACC GTGGTTCCGTGCTTCCGAGCACAAGTCCGATGCGTGTTTAACATGAAACC CCCTCCGAGCGATGCCCGTTGGTGCAAATACTTTTTGACGTGGGGAGCAT TTTGCACATTGCTCATTCAGGCGTGCTCTCGACCGTTTTTATTTCCGGGT CTAAACAAATAAATACCAGGGTTTTGTTTCCTGTTGTTTTTTCGGTCACC CTAACCCTAGCCCTAGCCCTAACCCTCCTATTATACTCTCGTTCACTCCC CCTACCCTTACCCGTACGCGAAGCTCCCAACGTACCCGCGCACCGGCTCC CCCTTTTGCGACATATGCACCTAAACAGGTTCGTGATCGGGTCTGCATCG GTGATTATTAACGACATCATGGCCTACATCTGCGGGAGGATATTCGGGAG GACACCGCTGACGGTACTCTCGCCCAAGAAGACGCGGTGAGCTTACATGC ATACTTCTACGTAGTACAGGGTCAGGGTTAGGATTAGGGGTTAGGGTTAG GCCTAACTCTAACCCTAAGCTTACATACATGCGTAGTACATCACGGCGCA CTCTCGGAGAGCCCTGATGAAGAGCGAAGCTAAGAATAGGTTTGTCAAGA GACCCCCGAGACCAGACCCGGCGGCGGAGGAGAAGGGAAGATGTAGGTAT TTATCTCATGCGAGGTTGTGTCTGTCTGTTTGTTTGTTTGTGCTCTTCTT CGGCCCGCGTGCGTGTGAATGTGTACTGACGCCAAGTCAGCGGAAAGGCA GAAAAGCAGCCGAAAAGCGCATGCATATGCATATTTAGTAGAAGTATCTC AGAACAATTGGCCGAGTCAACGACCCAGCCTCCACGCCAAACTCTTGCAC ACAGCGATGATCTGTCGCCCCGCCCCTACCCGCAGACCTGTGGCCCTATA CTCTTGCCCTTACCGCACCCCGTCCCCTACCCCAGCCGTAACCATAACCC TTAAACCCTGACCCTGATCTTATCCTTACTAATATGTAGCCCTGACTCTA ACTCCAACCCTAACTCTCACCCTGATCTTACCCCTACCACTATTTGGCCC TAAGTCTAACTCCAACCCCAACCCTCACCCTGATCTTACCCCTACCACTA TTTGCTCTTAACTCTTAACTCTAGCCATAACCCCGACCCTGATCTTGCCT TTGCCGCTATTCGGCCCTAACTCTAACTCCAACCCCGACCCTAACCGAAC CCCTTGTGGCCACAGGGAGGGCTTTGTAGGAGCCGCTCTCTGCACGAGCA TCACGGGCTGGCTTATCGGGCGGTGGCTCGGTGGGGTGGACTGGCTCATC AGCCCGAGGAACGTCATGCTTCTAGGCCGAGGAGAGACGACTATGGATGT GGTGAGGAAGTGGTGCTTCATGCTGGGTTGTTGATGCTGTTGATGTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGCTGTTGGTGGTGGCTTCG CATTTGGTGTGTTTCTCTGCGTGCTCGTCCTGCTCCAGGACGGAAGCTTC CGTGGTTTGTGGAAACCCTTCCTTGCGGCTGCCCTCCTTCCTGGCTGTTT GGCGTTGGGGCCGGCCGGTGTTTCCCCACACCATGGCATTGATACCCTTT GAGGGTAAAGTTATCGTGTGACCACGGGAATTGACCGCGTCAGTGTTGGA TTAGTACACGGACTCATGGAGGTGTGCTGGATAGAGAGATGGACGGTTTT TAATGTGAAGGCAACACACACACACACACACACACACACACACACACACA CATACACATGGCATTGGGATAACCCATCGCATGGCTGATATTTTGTTTTC ACTCGTCCCGTAACCTTGGCATCTGCTCTTCTCTCGCCCCTCCGCCGCAA TCCCCGCCCCCCCTCGCGCGATCCTCGTCCTGGTTCTCTGTCGCAAATAG GGCAACATTTTCTCGAAAACCGTGCAGCTGCCGTGGTTGGAACTCATGGT TTCCAGAGCTGAGATTCACGCTTTCTGGTACGTTGGCAGTCCCGTGTTGC GGACAGTCCCGCGTTGTTGTTTATTGCTGTTGTCTTCATTGTATTAGAAT CCGTTCCGATCTCTCTATCCAGTACACCTCCATGAGTCCGTACTAATCCA ACACTGACGTGGTCGATTCCCGTGGTCACAGGATAACTAACTTACCCTAG AGAGAGTAGACTACTGAAAAATGAAAATAAATAAAATGGACCCGAAGGGT TCCCAAAGCACAAGCACAACATATCAAGATACAGATAGTCTGGAACCCTC CGCTCCCCTCTACACGCAATGTGAGGTGAAAACAGAAGTGGACAAGCTTT CTGTGTGTGTGTGTATTGGCTTCACATTAAAAACCGTTCCTGTACGACGT TAAAAAACAGCGACTCATACATACCTATAGATATAGACACCCAAACCAGT ACGTGCTTATTACTGTCTTTTTGCGTTTTTTTTTTTTCTTTTTCACATTT ATTTCCAGTGCTCGACGGGCTCCCTGTCACGCGGACAACTTGCCAGAGTA CTGAACCGTGGTCACACAGAAGGGTTCCTTTCCCTGAGGCTCCCACTCCC CCCGTCTGCGGTGCTTGCCCCCCTTAAGATTTTTGTCGCGAAAAGGGTTT CAGCTGTCCCTTTCCCTCGTCGACGTTGAGGTCGAAGTTTGTGTACACAC GCTGAGCGCGCTATCCACTGACAGGGACGGAAGCGAGAGAAAAAAACTCA CTCCGCAAGACGGGGCTTCGCTTTCCTGAGGTTCAGTGTTGCATGTGAAG TATCCCATTTCATGCGTTAATGTAGGCGTGAATGTTGTCATTGGTCATCG GACGCCTTAATTATTGCCTGCTCCAATCCAAATAAATAATTAATTAATTA ATTAAAAAAAAACACACACTATATATACTATATATATCCATCATTGCTCA GCTTCGATTGCAGTCAAAGCCTTGTAACGTATTCGTTGCTATCACATATG TATGTAGCTCACCTCTCGGAGGGCGGTTACTTCTAAATACCGTAGGTGAC ACAAGATACCACACCCCCTGGATCGAATTTGAGAGCTCCATTACTCCGTA ACGAAGAGGGTGCCAGCACCAAACGACACATTTTCGGGCAGCCCTCGACT AGATCTTTCCAACGCCACTCCTTTCGGCACTAGCTAGCGCTCTTTTTGCT GGGGGAGGGATCGAGCTTTGAAAATATGTCCAGGGGGTGTGGTATCTTGT GTCACCTACGGTAGGCCAAGCGCCGCGAACGGAGAGAATTGGCCACAGCT GAAAGAAAGACCCACACTTTTGCATTATTTTAGTATTTCAACATTTCGTT TTTTTTTCGACCCCTAAATAGATACATACAATATTTAATATTAGTTCTGA GCTTTGCACAATCGATGTATTTGCGTACCTACGTCGCTCCATGCGCGCAC CCCACCCGTCCACCGCAGGCTGTAGAGCATTTACGTAAATAGAGTAAATA TGGATTAATGGTGTGGTTGGCGGCTGCCCGTCCTACGGCGACTAACGGCC CTATTTTTCTAGAAGGAGAACTCGCGAGTTTTTTATTTTATTTTTACAAA TGGTAGTACCGTACCGGCCCGGTCATAAGAAACTGAAATTTCCAAGAAAT TTCGGCCGAGGCTGAGTTTCTTAAGAGTAATTATTTATATAGGATTTAGT GTAGCACTCGCCACGGAGCCCTCGTTTTTGGTAAATCTGAGGCTGGGTTT CTTATGGGTGAGTTTCTTATGAGCGGAGCCGGTGCTGTAGATGGGAAGTT GGTTGGTTGGTTTTGCCCCTGCACACGCCGTTTCCGTTTTGTCGCCTGTC TGATGATCGCGGCCGGTTCGTTCCCGTTTTGTCGCCTTTGTGGCCTCTGG AAGAACCGTTCCGAGTCGGGGCTTCGATTGGCCGACCGGTCATGCATCCA TTCCATGCATTTTTATTTTTTTTTGTCTGCCCATTTTTGGATTTTGTCGT CTGCTCCTCTGGCCCCATCCTCCACTTCTACTCTAGCTAGACGACTCAAC CGGGGTCACATAGGAGGGGGGGGTTGGACCCCCTCCTGCGGTGCCTGCCT AGGTTTTTTTTATCGCGAGCAGGGTTCATGTGGATGGCTGGCTGGCTGGC TCGGGCAAAAACGGAACTCACAATATTGCTTGTATGCTTGTTGTTTTGTC CCTGTGTCCTGCACGCGGTTTGTGCGCTGTGCTTGTTTCTGTTCCGGGCG CTTTTTTCTTCACGGTGCCCCCTTGCTGAAAGAAAAGCAGTGAATCAAAA ATGGAACCTATTTTAACACGCATTGGAGACGGGACTCCAGTGAGATTCCA TCGGTGTTCCAAGATAGTGACGTAATAATATTGGTCCCAACAGCCCAGTA AAAAAACACACCTAAAATGCTGAAAAATCCCCCTCGTTGCCTGCCGCGAC ACCAAACCAGGATCGCTCTGATGGCGTCGCTCATCGGGCCCTTCGGGGGA TTTTTGGCGAGCGGCCTCAAGAGGGCCTACAACGTCAAGGACTTTGGCGA CACGTGAGGAAAAAGCACGTTTTTTTTTCTTTTCTTTTTTTTTCTTGTTC TTTCTTGTTTTTTCGCTTTTGATTGAGTTAGTCCGGCGTATTTCAGGGCG ACTTGTGTCCCCAGGGGCGGAATGGACCTCGGCGTATTTATTTGCTCTGC GTTTTTTTGCATGTTTTTTAGATCGGGCGTGTTTTTCACGGTGACTCGTG TCCCGGGGGTCGATCGGAATGAGCCTCGGCCTATTTATTTATATATTTAC TTTTTTTATTGATTCGTGTGTGTGTGTGTGTGAGCGCTTTCCGGGTTCTG GAATGTTTTGGCTGTTTGCTTGTTTGTTTTTGTCGTCTCACGAGCTCTCA GGGCGGGGTTCGTACTCCTGTTTCGCCACGCAGTTTTGCTGGTACTATTT TCGCATTACATCACGTAGTACGTGCAGCATGGGCCTTACATGCCGCAAGA CGCCGCGTAGCTGTCCGGCCCATAAGAGTGCACGCCCCCTTTCGAAGTCG TGACCGTACAACTCACAGCAGTAGTAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAACAACAACAACAGATCCCACAATGATATTTGTTTTCGACAG GATTCCCGGCCACGGCGGAGCGGGCGACCGGTTCGACTGCCAAGTTATGC TTCTCCCGCTCGTGTACTTCTACCTCAAAGCGTTCGCGCCCGCCTTGGAT ATCTAGATAGATGGCCTAGGGTTTTGTAGGTTACACCCAAAAGGCTGCTT CCTTAGTTTCTGTGTTTAGCCTATGTATGCCTCTAACCGCAAGGAAAGGA TTGATGTAATACGGTAGGCGACTGAAAGCGTCACAACAGAACCGAACGGG TTCGGGAAAGACGTGCCCGCCTTGGACATGCGGATAGGGATTGAGGTTTC GCGCCTAACTAGAGATGCAGAGGCCGCCGTGTGTTTCTCAGCACCACCCT CGCTTGCCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCTTCACATTT AAAACCGGTCCGATCTCTCCATCCAGTACCTCCATACGTCCTCGGGTCGG CTTGGTCTCTCATGCAGTCAGCGCGAAGTAGATTGCGAGGGGGATATTTA GAAACTTATCTAGTGGATCGCGTATTTTTCTGATAGCACCTATTGTGCCT ACATTTGTTTTTCAGTCGCCGTTTTCTGCCTAAGCTGCGATGTCTGCTGG ATCTTCGGTCCGCGTTTGCGCGGCCGCGAGTGATTGTCTTGCGTCCACAC CTTGTAGCTGCGCCCACATGGTGCCGGGTTTCTCTTGTAGCTGGTAGGCA TATTGTAGCTCACATATGTTGTAGAGGATATTTTTGAGTGCCCTCAAAGT AGACGGAAAACGAACCATGCGTAGAAACCCTTATTTTCCAACGCGTTCAA GAGTTTGAAGCTGCGGTCGTCAAGGATCACGTGTCTTCGGACGACCTTGT GTGTAGTGCTGCCGACGCTTTCGCGCCTATGAGGCTTGGGCGGCGATTCC ATCGATCGCTGTATCTACACGTGTAGTCGCGCCTGCCCTTCCGGAAGCTT TGTCCCTTGTGGGTCTGGGTGTAGAGAGTCATATCGAGAAGTACGCCCTT GTTGCGGTACACCGAGGACGGCCGGCGTTGGTGATCCCTCCGCTCTTGGC CAAGATGTTAATCATGCTCGCGTTCCGTTCCCTGTTAAAGGCGCTCGATT CGCTTTCATTTCCACGACGAATGCCGTTTTTGTTTTCTTTCTTTTTCCGC CCATCATTGGCATATTTGTCGTCTGCCCCACTGGCCCCCTTCCTTCCTCC ACTTCGGCTAGCCGTATGTATGTAGACGGATCCATGTGGCATCAATATGT G
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5015:4980..13280-

>mRNA_L-elsbetiae_contig5015.13027.1 ID=mRNA_L-elsbetiae_contig5015.13027.1|Name=mRNA_L-elsbetiae_contig5015.13027.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig5015:4980..13280- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAGCGTTCTGCCGGTGGCACGTCCCGGCCTGTGCTGCACTGTACGT
GGGGCTACTGCTGCAGTTCATCGCCAGCTTGCGGAGCCCCCCGCTAATCG
TATGGCAGCGTTCTGCCGGTGGCACGTCCCGGCCTGTGCTGCACTGTACG
TGGGGCTACTGCTGCAGTTCATCGCCAGCTTGCGGAGCCCCCCGCTAATC
GTGTACCAGTTAGGGCAACTGGCCGCGGCGCACCTCGCCTGCTTCTTTGT
GCTCCCCTCCGCCCTCGTTTCCTTCGCGGCGAGAGCTGGTCTCTACTGGT
ACCAGTTAGGGCAACTGGCCGCGGCGCACCTCGCCTGCTTCTTTGTGCTC
CCCTCCGCCCTCGTTTCCTTCGCGGCGAGAGCTGGTCTCTACTGGTTCGT
GATCGGGTCTGCATCGGTGATTATTAACGACATCATGGCCTACATCTGCG
GGAGGATATTCGGGAGGACACCGCTGACGGTACTCTCGCCCAAGAAGACG
CGGTTCGTGATCGGGTCTGCATCGGTGATTATTAACGACATCATGGCCTA
CATCTGCGGGAGGATATTCGGGAGGACACCGCTGACGGTACTCTCGCCCA
AGAAGACGCGGGAGGGCTTTGTAGGAGCCGCTCTCTGCACGAGCATCACG
GGCTGGCTTATCGGGCGGTGGCTCGGTGGGGTGGACTGGCTCATCAGCCC
GAGGAACGTCATGCTTCTAGGCCGAGGAGAGACGACTATGGATGTGGGAG
GGCTTTGTAGGAGCCGCTCTCTGCACGAGCATCACGGGCTGGCTTATCGG
GCGGTGGCTCGGTGGGGTGGACTGGCTCATCAGCCCGAGGAACGTCATGC
TTCTAGGCCGAGGAGAGACGACTATGGATGTGGGCAACATTTTCTCGAAA
ACCGTGCAGCTGCCGTGGTTGGAACTCATGGTTTCCAGAGCTGAGATTCA
CGCTTTCTGGGCAACATTTTCTCGAAAACCGTGCAGCTGCCGTGGTTGGA
ACTCATGGTTTCCAGAGCTGAGATTCACGCTTTCTGGATCGCTCTGATGG
CGTCGCTCATCGGGCCCTTCGGGGGATTTTTGGCGAGCGGCCTCAAGAGG
GCCTACAACGTCAAGGACTTTGGCGACACGATCGCTCTGATGGCGTCGCT
CATCGGGCCCTTCGGGGGATTTTTGGCGAGCGGCCTCAAGAGGGCCTACA
ACGTCAAGGACTTTGGCGACACGATTCCCGGCCACGGCGGAGCGGGCGAC
CGGTTCGACTGCCAAGTTATGCTTCTCCCGCTCGTGTACTTCTACCTCAA
AGCGTTCGCGCCCGCCTTGGATATCTAGGATTCCCGGCCACGGCGGAGCG
GGCGACCGGTTCGACTGCCAAGTTATGCTTCTCCCGCTCGTGTACTTCTA
CCTCAAAGCGTTCGCGCCCGCCTTGGATATCTAG
back to top