prot_L-elsbetiae_contig5014.13026.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5014.13026.1
Unique Nameprot_L-elsbetiae_contig5014.13026.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length496
Homology
BLAST of mRNA_L-elsbetiae_contig5014.13026.1 vs. uniprot
Match: A0A6H5KYS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS1_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 6.200e-27
Identity = 134/310 (43.23%), Postives = 161/310 (51.94%), Query Frame = 0
Query:   35 LPGSYIFDVVASNFTALDRVSRSDYRLVCVAEDLSNAHCPSALDGRRAADVLRRSYPELSVVLLLDQ-------PKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMAPCT-RTPKSPP-------NSRMPPNST----VF-------RRRSGSSGV----------GVGGGGVGASDVASAADGFASVSMGNMGI---RGAGAGRGGEGGNLGCGEREGLSTDALIASFASPPGGVSVLSS--PFGPAWPPP------APHVGPLLTAYLKVVDYVLRKPFSDETFRLLLEATEIDHRRVS 297
            LPGSY+FDVV +NF AL+RVSRS YRLVCVA++       SALDGR+ A V+RRS+P+L+VVLLLD        P P                   XXXXXXXXXXXXXXX +   P T  +P  PP        + +P  ST    VF       R  SG S            G+G  G    +  S   G AS    N G+    G G GRG  G   G    E  STD  +AS+  PP G +  +S  P    +PP       +P +GP L   L +VDYVL++PFSDETFRLLLEA E DHRRVS
Sbjct:    2 LPGSYVFDVVTNNFGALERVSRSKYRLVCVAQESR-----SALDGRKVATVIRRSFPDLTVVLLLDDDVRTRSPPLPEKAERPVSLKKKRAACTSSXXXXXXXXXXXXXXXASIPLPSTLASPPLPPLTLTMPFGAELPSPSTCRSGVFSDTSMLRRHCSGGSXXXXXXXXXXXXGLGSFGAVWPNGGSLKGGLAS----NRGVPDATGTGLGRGATGIRGGTRSAEAPSTDVFVASW--PPSGAATGASLRPAEEGFPPXXXXXXCSPSLGPSLVMDLGIVDYVLKRPFSDETFRLLLEAAEEDHRRVS 300          
BLAST of mRNA_L-elsbetiae_contig5014.13026.1 vs. uniprot
Match: D8LSI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI4_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 8.170e-27
Identity = 132/312 (42.31%), Postives = 163/312 (52.24%), Query Frame = 0
Query:   35 LPGSYIFDVVASNFTALDRVSRSDYRLVCVAEDLSNAHCPSALDGRRAADVLRRSYPELSVVLLLD----QPKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMA--PCTRTPKSPP----------NSRMP----------PNSTVFRRRSGSSGV-----------GVGGGGVGASDVASAADGFASVSMGNMGIRGAGAGRGGEGGNLGCGEREGLSTDALIASFASPPGGVSVLSS--PFGPAWPPP-------APHVGPLLTAYLKVVDYVLRKPFSDETFRLLLEATEIDHRRVSAHT 300
            LPGSY+FDVV +NF AL+RVSRS YRLVCVA++       SALDGRR A V+RRS+P+L+VVLLLD    +P+             XXXXXXXXXXXXXXXXX        +A  P   T  SPP           + +P          P++++ RR S                G+G  G    +  S   G A  + G M   G G GRG  G   G    E  STD   AS+  PP G +  +S  P     PP        +P +GP L   L +VDYVL++PFSDETFRLLLEA E DHRR++A T
Sbjct:    2 LPGSYVFDVVTNNFGALERVSRSKYRLVCVAQESR-----SALDGRRVAMVIRRSFPDLTVVLLLDDDDVRPRSPPLPEKAERPVSXXXXXXXXXXXXXXXXXNPASSSTSLASIPLPSTLASPPLPTLTLTTPFGAELPSPSTCRSGVFPDTSMLRRHSSGXXXXXXXXXXXXXXGLGSIGAVWPNGGSLTGGLAG-NGGVMDATGTGLGRGATGVRGGTRSSEAPSTDGFAASW--PPSGAATGASLRPAEEGCPPXXXXXXXCSPSLGPSLVMDLGIVDYVLKRPFSDETFRLLLEAAEKDHRRLAATT 305          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5014.13026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYS1_9PHAE6.200e-2743.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI4_ECTSI8.170e-2742.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 409..485
NoneNo IPR availablePANTHERPTHR44305FAMILY NOT NAMEDcoord: 392..487
NoneNo IPR availablePANTHERPTHR44305:SF2NIMA RELATED KINASE 3coord: 392..487

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5014contigL-elsbetiae_contig5014:1234..4893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5014.13026.1mRNA_L-elsbetiae_contig5014.13026.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5014 1225..4893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5014.13026.1 ID=prot_L-elsbetiae_contig5014.13026.1|Name=mRNA_L-elsbetiae_contig5014.13026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=496bp
MSFRTEPIFRVLYVEPSARDTQLAAEILHEVTNRLPGSYIFDVVASNFTA
LDRVSRSDYRLVCVAEDLSNAHCPSALDGRRAADVLRRSYPELSVVLLLD
QPKPPQEPKKKPPRSKKGRKKRGSSASSTPPPPPPPPPPADMAPCTRTPK
SPPNSRMPPNSTVFRRRSGSSGVGVGGGGVGASDVASAADGFASVSMGNM
GIRGAGAGRGGEGGNLGCGEREGLSTDALIASFASPPGGVSVLSSPFGPA
WPPPAPHVGPLLTAYLKVVDYVLRKPFSDETFRLLLEATEIDHRRVSAHT
RSFVPLRVAKMRPCDYSSNEFYQQANRHSGGCHGRGLRACFGAARARGWG
GGWQAGGDEAEAGDASASMRLGSPLLPPPPKRIKSPPLSPRQIEQQREQP
KPPKQPQPQQQEQEQLQKQQQQQQQQQQQQQQQQQQQQQQQQQRQQQQQQ
QLQLQLQQLQQQLQQQQQQQQQQQQQRQMQQQQTKCNSSSLARPPP
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