prot_L-elsbetiae_contig5003.13008.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5003.13008.1
Unique Nameprot_L-elsbetiae_contig5003.13008.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length167
Homology
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BLAST of mRNA_L-elsbetiae_contig5003.13008.1 vs. uniprot
Match: A0A6H5K9R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.630e-11
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 0 
Query:   36 SSAELAAVREQVETLKQQLVMVGVQQLALTGVPTGAALLN-RHEG-----AFPFHGPALPAA 91
            SSAEL AV+EQ+E LKQQLVMVGVQQLALTGVPTGAALL+ RH G     A PF  P   AA
Sbjct:  674 SSAELDAVKEQMEVLKQQLVMVGVQQLALTGVPTGAALLSGRHSGRGGGPARPFKDPPAAAA 735
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BLAST of mRNA_L-elsbetiae_contig5003.13008.1 vs. uniprot
Match: D7FS85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS85_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 8.870e-11
Identity = 48/77 (62.34%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   20 SPEWRRP--EGGGQGDAASSAELAAVREQVETLKQQLVMVGVQQLALTGVPTGAALLN-RHEG------AFPFHGPA 87
            SP+  RP  EG     AA S EL  V+EQ+E LKQQLVMVGVQQLALTGV TGAALLN RH G      A PF+ PA
Sbjct:  570 SPKRVRPCLEGEAVPGAAFSVELDPVKEQMEILKQQLVMVGVQQLALTGVRTGAALLNGRHSGGSGGGPAHPFNDPA 646
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5003.13008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9R0_9PHAE2.630e-1170.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS85_ECTSI8.870e-1162.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5003contigL-elsbetiae_contig5003:6427..8520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5003.13008.1mRNA_L-elsbetiae_contig5003.13008.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5003 6427..8522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5003.13008.1 ID=prot_L-elsbetiae_contig5003.13008.1|Name=mRNA_L-elsbetiae_contig5003.13008.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp
AAAAVGAAGGGGNGGGSVASPEWRRPEGGGQGDAASSAELAAVREQVETL
KQQLVMVGVQQLALTGVPTGAALLNRHEGAFPFHGPALPAAGRSAAGDGA
TASMGAEASPLPMRGGGDRSGMMRVQRRQRQQLQQQPPPGRTTQPKRTRR
GRDGACGPHEEEEEEQA
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