prot_L-elsbetiae_contig4995.12989.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4995.12989.1
Unique Nameprot_L-elsbetiae_contig4995.12989.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length226
Homology
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BLAST of mRNA_L-elsbetiae_contig4995.12989.1 vs. uniprot
Match: D7FUN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN2_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 5.140e-68
Identity = 146/255 (57.25%), Postives = 159/255 (62.35%), Query Frame = 0 
Query:    1 MTYTALAAETEVIENLREVLDGLQSNIRNLLVDMETELKQPPPPSVLQGAASYANNAARSAVTVAIDGFNNASKIFDASFEALAEPSRSTLLRSSELFPWQSWYQAWTNITKGEDSLFA-AEHKLLSAAASA---------------------EGEYILGG--------SGGSGGGDTAHEVGPFAGPGAGSGGPADRQEEVPRPWWGRRSVKRWRPEEEETPAVKPPGDGGGERGARGGVAPAGMKPGRERWKG 225
            MTY ALAAETEVIENLREVLDGLQSNIR  L DMETEL+QPPPPSVLQGAASYANN ARSAV VAIDGFNNAS++FDASFEALAEPSR TLLRS+ELFPWQSWYQAWTNITKGED+LFA AE +LL AA                        + E ++GG        S GS G D     G  A P     G         RP   RR +KRW+PE     A  P    GG+  A G      M+  R RWKG
Sbjct:    1 MTYAALAAETEVIENLREVLDGLQSNIRKSLEDMETELRQPPPPSVLQGAASYANNVARSAVAVAIDGFNNASRVFDASFEALAEPSRRTLLRSTELFPWQSWYQAWTNITKGEDNLFATAEPRLLKAALEGXXXXXXXXXXPHSLADDGTHNDEEGLVGGFDPSALLTSSGSSGRDRGRGAGGVAAPSVEGSGGGGA-----RPGR-RRGLKRWKPE---LAAESPESGEGGQGPAAGNGRDGSMELRRRRWKG 246
[Close]
BLAST of mRNA_L-elsbetiae_contig4995.12989.1 vs. uniprot
Match: A0A6H5KN12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN12_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 1.760e-59
Identity = 110/129 (85.27%), Postives = 118/129 (91.47%), Query Frame = 0 
Query:    1 MTYTALAAETEVIENLREVLDGLQSNIRNLLVDMETELKQPPPPSVLQGAASYANNAARSAVTVAIDGFNNASKIFDASFEALAEPSRSTLLRSSELFPWQSWYQAWTNITKGEDSLFA-AEHKLLSAA 128
            MTYTALAAETEVIENLREVL GLQSNIR  L DMETEL+QPPPPSVLQGAASYANN AR AV VAIDGFNNAS++FDASFEALAEPSR TLLRS+ELFPWQ+W+QAWTNITKGED+LFA AE +LL AA
Sbjct:  631 MTYTALAAETEVIENLREVLAGLQSNIRRSLEDMETELRQPPPPSVLQGAASYANNVARLAVAVAIDGFNNASRVFDASFEALAEPSRRTLLRSTELFPWQTWHQAWTNITKGEDNLFATAEPRLLEAA 759
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4995.12989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUN2_ECTSI5.140e-6857.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN12_9PHAE1.760e-5985.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4995contigL-elsbetiae_contig4995:1445..4040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4995.12989.1mRNA_L-elsbetiae_contig4995.12989.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4995 1445..4870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4995.12989.1 ID=prot_L-elsbetiae_contig4995.12989.1|Name=mRNA_L-elsbetiae_contig4995.12989.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
MTYTALAAETEVIENLREVLDGLQSNIRNLLVDMETELKQPPPPSVLQGA
ASYANNAARSAVTVAIDGFNNASKIFDASFEALAEPSRSTLLRSSELFPW
QSWYQAWTNITKGEDSLFAAEHKLLSAAASAEGEYILGGSGGSGGGDTAH
EVGPFAGPGAGSGGPADRQEEVPRPWWGRRSVKRWRPEEEETPAVKPPGD
GGGERGARGGVAPAGMKPGRERWKG*
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