prot_L-elsbetiae_contig4973.12954.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4973.12954.1
Unique Nameprot_L-elsbetiae_contig4973.12954.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length234
Homology
BLAST of mRNA_L-elsbetiae_contig4973.12954.1 vs. uniprot
Match: Q8QNA3_ESV1K (EsV-1-184 n=2 Tax=root TaxID=1 RepID=Q8QNA3_ESV1K)

HSP 1 Score: 173 bits (438), Expect = 2.430e-50
Identity = 99/228 (43.42%), Postives = 141/228 (61.84%), Query Frame = 0
Query:    9 EEKVEEVVGVDAESFDFTNDLFRKTYGSNTMDDAQARNQTKQRQASRG---FVNEGLEVATNARLSHFEKEKVYANEWTNSCLNVIEATLLECQKAAAAHMEATRACRHKHRMMSIPLIIIGTAATALSFLSAGATCSSEEDDSSGEGVKYVVAVLTSLASVGAGVSALYSFSNKQTEHIAAGGAFTNLARRIRCQLFLPNHLRAQAEVCLVDFGAEQSHLVNTSPLL 233
            EEKVE V   D E+ D   ++F + YG++TM  A+   +   R  S+     V+ GL+V TNARLSHF+KEK+Y N+W NS L+++E  L EC +++ AH EA R CR K+RM+ IP II+                         +G+KYVVA LT+L  + +G++++Y+F +K +E+IAA GAF NLARR +   FLP HL+  +EV L D  AEQ+HL ++SPLL
Sbjct:   13 EEKVETV---DLEALDGPENIFSQEYGADTMAQARENRERLARITSKTKKHTVDPGLQVGTNARLSHFQKEKLYQNDWNNSVLDLMENLLYECTQSSKAHAEAARGCRRKYRMLMIPSIIVAXXXXXXXXXXXXXXXXXXXXXXXXDGLKYVVASLTALVGIMSGIASVYNFKSKMSENIAAAGAFANLARRCKIICFLPIHLKPNSEVALTDISAEQAHLTSSSPLL 237          
BLAST of mRNA_L-elsbetiae_contig4973.12954.1 vs. uniprot
Match: B5LWK0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK0_9PHYC)

HSP 1 Score: 150 bits (380), Expect = 1.680e-42
Identity = 80/166 (48.19%), Postives = 111/166 (66.87%), Query Frame = 0
Query:   68 ARLSHFEKEKVYANEWTNSCLNVIEATLLECQKAAAAHMEATRACRHKHRMMSIPLIIIGTAATALSFLSAGATCSSEEDDSSGEGVKYVVAVLTSLASVGAGVSALYSFSNKQTEHIAAGGAFTNLARRIRCQLFLPNHLRAQAEVCLVDFGAEQSHLVNTSPLL 233
            ARLS+FE E+V+ N+WTN+ L+++E    +C+  ++A+ +A R  R KHR +SIP I++ + ATA SF SAG++C   +DD     VK  VA+LTS+ ++  GVSALYSF +K T  IAA G F  LA++ + Q+FL N LR   EV L +  AE  HL NTSPLL
Sbjct:    6 ARLSNFEAERVFENDWTNASLDLLEGLHKQCKDNSSAYADAARVARWKHRAVSIPTIVVASFATATSFFSAGSSC---DDDEENTAVKISVAILTSITAILGGVSALYSFDSKTTACIAASGNFDALAKKAQLQIFLSNQLRGPVEVVLTEISAEFCHLTNTSPLL 168          
BLAST of mRNA_L-elsbetiae_contig4973.12954.1 vs. uniprot
Match: B5LWK1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK1_9PHYC)

HSP 1 Score: 59.3 bits (142), Expect = 2.020e-7
Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 0
Query:   82 EWTNSCLNVIEATLLECQKAAAAHMEATRACRHKHRMMSIPLIIIGTAATALSFLSAGATCSSEEDDSSGEGVKYVVAVLTSLASVGAGVSALYSFSNKQTEHIAAGGAFTNLARRIRCQLFLPNHLRAQAEVCLVDFGAEQSHLVNTSP 231
            EW++S   ++E+ L +C   A  H   +      +RM+S+P +  G AATALSF +      + + + S   V+ +VAVL+++++V A +S    +   Q  H  A G +T L RRI    F  +       V L +  A  S++   SP
Sbjct:   22 EWSSS-RTLMESWLKKCSARAHEHSRESLRSGFANRMLSVPKLFFGGAATALSFWA------TSDLNGSSHRVRVLVAVLSAISTVLASLSQFLRYDESQYRHQMAAGMYTQLCRRIELSFFSEDEGGVNDAV-LAEIAAGFSNVATFSP 163          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4973.12954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q8QNA3_ESV1K2.430e-5043.42EsV-1-184 n=2 Tax=root TaxID=1 RepID=Q8QNA3_ESV1K[more]
B5LWK0_9PHYC1.680e-4248.19Uncharacterized protein n=1 Tax=Feldmannia species... [more]
B5LWK1_9PHYC2.020e-730.00Uncharacterized protein n=1 Tax=Feldmannia species... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 178..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..117
NoneNo IPR availableTMHMMTMhelixcoord: 119..141
NoneNo IPR availableTMHMMTMhelixcoord: 156..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4973contigL-elsbetiae_contig4973:2623..3324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4973.12954.1mRNA_L-elsbetiae_contig4973.12954.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4973 2623..3324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4973.12954.1 ID=prot_L-elsbetiae_contig4973.12954.1|Name=mRNA_L-elsbetiae_contig4973.12954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=234bp
MFGEEKEEEEKVEEVVGVDAESFDFTNDLFRKTYGSNTMDDAQARNQTKQ
RQASRGFVNEGLEVATNARLSHFEKEKVYANEWTNSCLNVIEATLLECQK
AAAAHMEATRACRHKHRMMSIPLIIIGTAATALSFLSAGATCSSEEDDSS
GEGVKYVVAVLTSLASVGAGVSALYSFSNKQTEHIAAGGAFTNLARRIRC
QLFLPNHLRAQAEVCLVDFGAEQSHLVNTSPLL*
back to top