mRNA_L-elsbetiae_contig4973.12953.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig4973.12953.1
Unique NamemRNA_L-elsbetiae_contig4973.12953.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: Q8QNA1_ESV1K (EsV-1-187 n=3 Tax=root TaxID=1 RepID=Q8QNA1_ESV1K)

HSP 1 Score: 427 bits (1097), Expect = 3.100e-147
Identity = 227/341 (66.57%), Postives = 264/341 (77.42%), Query Frame = 1
Query:    1 MHAEISERLSLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVLMDSAVTHKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLAVAVRSQLGNGGQEGLAEDIVLRSGRSISRAMHMAREGNNDEVKWVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQF 1023
            MH EI +RL+ MSRHGDIPHLLFHGPRGSGKM+LV+HLL KLYGPGV+ V +EKRVV+T SS           +  IEIDVRVSNYHIE+EPS AG+ DT+VVQ  IKEMA NGSIAAV  +  V HKTIVLRGAG++SKQAQAGLRRTME  + SCRL+LVSTF SRVIEPLRSRCV IRVPLPS  NLA A+         + L   IV  SGRSISRAM MA+ G+ D++ WV+Y++ +CTGVFLEQSPRKL+D R+SLNELL AGV A+IILKTL+H L+ H+ L+      +K EIV WAA YEHR+ VGS+ ILHLEAFVA FMDL+KK TVNQF
Sbjct:    1 MHPEIEDRLTSMSRHGDIPHLLFHGPRGSGKMTLVRHLLKKLYGPGVHRVTTEKRVVETASS-----------KHTIEIDVRVSNYHIEMEPSDAGANDTYVVQHAIKEMANNGSIAAVFKNCDVRHKTIVLRGAGNLSKQAQAGLRRTMEKFTASCRLVLVSTFASRVIEPLRSRCVLIRVPLPSAENLAAAIEID-----DKALVSQIVQSSGRSISRAMFMAKAGSADKMLWVKYVESMCTGVFLEQSPRKLIDARDSLNELLVAGVPASIILKTLMHGLISHKNLKGEGG--VKREIVRWAAVYEHRICVGSKDILHLEAFVASFMDLYKKHTVNQF 323          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: A0A6H5JU66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU66_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 5.270e-135
Identity = 215/343 (62.68%), Postives = 255/343 (74.34%), Query Frame = 1
Query:    1 MHAEISERLSLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVLMDSAVTHKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLAVAVRSQLGNGGQEGLAEDIVLRSGRSISRAMHMAREGNNDEVKWVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHR-LSVGSRPILHLEAFVACFMDLFKKFTVNQFL 1026
            MH EI +RL+ MSRHGD PHLLFHGPR SGKM+LV+HLL KLYGPGVN V +EKRVV+T SS           +  IEIDVRVSN+HIE+EPS AG+ DT VVQ  IKEMA NGSIAAV  +  VTHKTIVLRGA ++SKQA AGLRR ME  + SCRL+LVSTF SRVIEPLRSRCV IRVPLPS  NLA  +         + L   IV   GRSISRAM MA+ G  D + W +YI+ +CTGVFLEQSPRKL+DVR+SLNELL AGV A+++LKTL+  ++ H+ L+  D   +K EIVEWAA  EHR + VGS+ ILHL+A++A FMDL+KK TVN F+
Sbjct:    1 MHPEIEDRLTSMSRHGDSPHLLFHGPRESGKMTLVRHLLKKLYGPGVNRVTTEKRVVETASS-----------KHTIEIDVRVSNHHIEMEPSDAGANDTCVVQHAIKEMANNGSIAAVFKNCDVTHKTIVLRGAANLSKQAHAGLRRMMEKFTASCRLVLVSTFASRVIEPLRSRCVLIRVPLPSAENLAEEIDID-----DKALVSQIVESWGRSISRAMFMAKAGRADTMVWAKYIESICTGVFLEQSPRKLIDVRDSLNELLVAGVPASVVLKTLMQGMISHKNLKGEDG--VKREIVEWAAVNEHRRICVGSKDILHLKAYIASFMDLYKKHTVNMFV 325          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: D8LRR8_ECTSI (EsV-1-187 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR8_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 9.940e-114
Identity = 185/279 (66.31%), Postives = 213/279 (76.34%), Query Frame = 1
Query:    1 MHAEISERLSLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVLMDSAVTHKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLAVAVRSQLGNGGQEGLAEDIVLRSGRSISRAMHMAREGNNDEVKWVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTL 837
            MH E+ +RL+ MSRHGDIPHLL HG RGS KM+LV+HLL KLYGPGVN V +EKRVV+T SS           +  IEIDVRVSNYHIE+EPS AG  DT+VVQ  IKEMA NGSIAAV  +   THKTIVLRGAGD+SKQAQAGLRRTME  + SCRL+LVSTF SRV EPLRSRCV IRVPLPS  NLA A+         + L   IV  SGRSISRAM MA+ G+ D++ WV+YI+ + TGVFLEQSPRKL+DVR+SLNELL AGV A+++LKTL
Sbjct:    1 MHPEVEDRLTSMSRHGDIPHLLLHGLRGSDKMTLVRHLLEKLYGPGVNRVTAEKRVVETASS-----------KHTIEIDVRVSNYHIEMEPSDAGVNDTYVVQHAIKEMANNGSIAAVSKNCDATHKTIVLRGAGDLSKQAQAGLRRTMEKFTASCRLVLVSTFASRVAEPLRSRCVLIRVPLPSAENLAAAIGID-----DKALVLQIVESSGRSISRAMFMAKAGSADKMLWVKYIESISTGVFLEQSPRKLIDVRDSLNELLVAGVPASLVLKTL 263          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: D7G7C2_ECTSI (Rep_fac_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C2_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.240e-73
Identity = 155/363 (42.70%), Postives = 209/363 (57.58%), Query Frame = 1
Query:    1 MHAEISERLSLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVL-------MDSAVTHKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLAVAVRSQLGNGG---QEGLAEDIVLRSGRSISRAMHMARE--------GNNDEVK---WVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQFL 1026
            +H E++ RL+ MS  G+IPHLLF+GP GSGK + V  LL ++YGPG   V  E R   T     PS+  V       E+    SNYHIE+ P  AG  D +VVQ  IKE+A N SI+A +         S + HK +VL G   ++KQAQAGLRRTME  + SCRLIL+    S+VIEP+RSRC+ +RVP PS + +   + S            LA  +   S R++ RA+ M             + EV+   W  YI  +   V LEQSPR+L++ RE L ELL   + A IILKTL  +LV     ++ D  K+  E+ +WAA YEHRL +GS+ ILHLEAFVA FM ++K + + +F+
Sbjct:   17 VHPELTTRLAAMSEDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKT-----PSNRVV-------ELTTVASNYHIEMSPGDAGIYDRYVVQDIIKEIAQNRSISASMGGGGSDDKKSKIGHKVVVLVGVDRLTKQAQAGLRRTMERYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPSESEVCSVLTSVCRKESLTLPPALAARVAKVSKRNLRRAVLMIEACRVQQYPFSEDQEVQMTDWENYITQLAREVVLEQSPRRLLEAREKLYELLTNCIPADIILKTLTRELV-----KNLDC-KLWGEVFKWAAFYEHRLHMGSKEILHLEAFVAKFMSIYKAYIIAEFM 361          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: F0XVP2_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP2_AURAN)

HSP 1 Score: 225 bits (574), Expect = 9.740e-68
Identity = 146/356 (41.01%), Postives = 208/356 (58.43%), Query Frame = 1
Query:    4 HAEISERLSLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVLMDSAVTHKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLA-----VAVRSQLGNGGQEGLAEDIVLRSGRSISRAMHMAREGNNDEVK-----------WVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQF 1023
            H E+SERL+ ++  GDIPHLLF+GP G+GK + +  LL  LYG G      EK+ ++     +P++ A       IE+    SNYHIEI PS AG+ D +VVQ+ IKE+A +GS+        V +K ++L     +++QAQAGLRRTME  + SCRLIL     S+VI+PLRSRC+ IRV  P+   +      VA R +L       LA  I   S R++ RA+    E    +             W QY+  + + +  EQSP++L+  R+ L ELL+  + A +ILKTL  +L     L++ D E +KAE+++WAA YEHR++ G++ I HLEAFVA FM L+KKF +  F
Sbjct:   18 HGELSERLATLAADGDIPHLLFYGPSGAGKKTRIMALLRALYGAGA-----EKQRLEHRDFKTPTNKA-------IEVTTVASNYHIEINPSDAGNNDRYVVQEVIKEIAQSGSLHKG-DKGRVGYKVVLLVEVDRLTRQAQAGLRRTMEKCTSSCRLILCCNNPSKVIDPLRSRCLGIRVAAPTEAEIVAVLDDVAARERLDL--PPALAARIAKASKRNLRRAILSLEECKVQQYPFDAAQAVPLPDWEQYVVAIASDIAREQSPQRLLATRDKLYELLSKCIPADVILKTLAREL-----LKNLDDE-MKAEVLKWAAFYEHRITQGNKEIFHLEAFVAKFMCLYKKFMMEMF 352          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: B7FSY5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSY5_PHATC)

HSP 1 Score: 225 bits (574), Expect = 1.220e-67
Identity = 144/361 (39.89%), Postives = 207/361 (57.34%), Query Frame = 1
Query:    4 HAEISERLS-LMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVLMDS-----AVTHKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLAVAVRSQLGNGG---QEGLAEDIVLRSGRSISRAMHM------------AREGNNDEVKWVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQF 1023
            H  IS+RLS L S    +PHL F+GP G+GK + +  LL  LYGPG + +  +KR   T +  +            +E+++  SNYHIEI P  AG  D FV+Q  IKEMA+N ++ A    S     A T KT+VL     +S+QAQA LRRTME  + +CRLILV    S+VIEP+RSRC+ IRV  P+   +   ++S   N      + LA +I   S R++ RA+ M             ++    +  W  YI+ +   +  EQ+P++LM  RE L ELL   + A +I+KTL  +L+++  L D+    +K E++EWAA YEHR+S+GS+ I HLEAFVA FM ++KK+  + F
Sbjct:   18 HDTISQRLSSLASNPESMPHLFFYGPAGAGKKTRITALLGSLYGPGASRLKLDKRTFTTPTKRT------------VELNMITSNYHIEISPGDAGLNDRFVIQDVIKEMASNKNVGASATSSERKSGAATFKTVVLVEVDRLSRQAQAALRRTMEKYASTCRLILVCNNQSKVIEPVRSRCLGIRVAAPTEDEICKVLKSVSINESFMLPDELAINIARESSRNVRRAILMLEACYVQKRGALTKDQPVQKTDWELYINQLAVEITREQTPQRLMAAREKLYELLVNCIPANVIIKTLAKELMKN--LDDS----LKREVIEWAAFYEHRISLGSKEIFHLEAFVAKFMAVYKKYLNDLF 360          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: K0TFT7_THAOC (Rep_fac_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TFT7_THAOC)

HSP 1 Score: 218 bits (554), Expect = 1.810e-64
Identity = 147/376 (39.10%), Postives = 211/376 (56.12%), Query Frame = 1
Query:    4 HAEISERL-SLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVLMD----------------SAVTHKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLAVAVRSQLGNGG---QEGLAEDIVLRSGRSISRAMHM-------AREGNNDEVK---------WVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQF 1023
            H  +++RL SL +  G +PHLL +GP G+GK + V  LL +++G G   +  EKR   T +            + ++EI++  SNYHIE+ P  AG  D +V+Q  IKEMAAN +IA+V+                  +  ++K +VL     +++QAQA LRRTME  S SCRLIL     S+VI+P+RSRC+ IRV  PS   +A  +++          + LA +I   S R++ RA+ M        R+ +  E+K         W +YI  + TG+  EQSP+ LM  RE L ELL   + A IILKTL+ +L+    L D     IKAE+V WAA YEHR+++GS+ I HLEAF+A FM L+KK+  + F
Sbjct:   18 HDTLTQRLTSLAADPGGLPHLLLYGPSGAGKKTRVMALLREVFGCGAERLRLEKRTFTTPT------------KRQVEINMIQSNYHIEMAPGDAGLNDRYVIQDVIKEMAANKNIASVVTSKDGNDGEDDGHAKKKAAKASYKVVVLVEVDKLTRQAQAALRRTMEKYSSSCRLILCCNNPSKVIDPVRSRCLGIRVAAPSDDEIASVLKTVSRKENIKLADELAINIARLSSRNLRRALLMLESCYVTTRDESPRELKADTPVPRTDWERYIAMLATGIVKEQSPKSLMAAREKLYELLINCIPAQIILKTLLMELLP--VLDDT----IKAEVVHWAAFYEHRIALGSKEIFHLEAFIAKFMALYKKYLNDLF 375          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: A0A7S4V0A9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V0A9_9STRA)

HSP 1 Score: 215 bits (548), Expect = 1.460e-63
Identity = 147/377 (38.99%), Postives = 205/377 (54.38%), Query Frame = 1
Query:    4 HAEISERL-SLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAV-----------------LMDSAVTHKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLAVAVRSQLGNGG---QEGLAEDIVLRSGRSISRAM------HMARE---GNN-------DEVKWVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQF 1023
            HA  +ERL SL +    +PHLLF+GP G+GK + V  LL  LYGPG   +  +KR   T +  +            +EI++  SNYHIEI P  AG  D FVVQ+ IKEMAAN +IA+                       V  K +VL     +S+QAQA LRRTME  S SCRLIL     S+VIEP+RSRC+ IRVP PS  ++   ++           + LA +I   S R++ RA+      H+ R    GN+        +  W  YI  + + +  EQSP++LM  RE L ELL   + A +I+KTL  +L      ++ D E +K E++EWAA YEHR+++GS+ I HLEAF+A +M ++K++    F
Sbjct:   18 HAATTERLTSLSADPTSMPHLLFYGPSGAGKKTRVMALLRALYGPGAERLRLDKRTFTTPTKRT------------VEINLISSNYHIEISPGDAGLNDRFVVQEVIKEMAANRNIASGSGTLSMGAKTDAEAAGNTKKKGVDFKVVVLVEVDRLSRQAQAALRRTMEKYSASCRLILCCNNQSKVIEPVRSRCLGIRVPAPSHDDICSVLKKVSRKESITLPDELAVNIARESSRNMRRALLMLESCHVQRRDAHGNSLSADQPVQKTDWELYISQLASEITREQSPQRLMAAREKLYELLINCIPADVIIKTLALELT-----KNLD-ESLKHEVIEWAAFYEHRIAMGSKDIFHLEAFIAKYMAIYKRYLNEMF 376          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: A0A1Z5KQG3_FISSO (Replication factor C subunit 3/5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQG3_FISSO)

HSP 1 Score: 214 bits (546), Expect = 1.630e-63
Identity = 136/354 (38.42%), Postives = 208/354 (58.76%), Query Frame = 1
Query:    4 HAEISERLSLMSRHGD-IPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVLMDSAVT-HKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSP---TNLAVAVRSQLGNGGQEGLAEDIVLRSGRSISRAM----HMAREGNNDE-----VKWVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQF 1023
            H++I++RL  ++++ D +PHL F+GP G+GK + +  LL  LYGPG   +  ++R   T ++ +            ++I++  S+YHIEI P  AG  D FVVQ  IKE+A+N +I+A+         KT+VL     +S+QAQA LRRTME  + +CRLIL     S+V+EP+RSRC+ IRVP P+    +N+ +    +  +   E +A +I     R++ RA+     M+ +G   +       W  YI  +   +  EQSP++L   RE + ELL   +  TI+LKTLV +L     LR+ D + +K  +VEWAA YEHR+++GS+ I HLEAFVA +M L+KK+  + F
Sbjct:   18 HSDITDRLQALAQNPDSMPHLFFYGPSGAGKKTRINCLLEALYGPGARKLKLDQRTFTTPTNKT------------VQINMVTSSYHIEISPGDAGLNDRFVVQDIIKEIASNQNISAMSSTKKTALFKTVVLVEVDRLSRQAQAALRRTMEKYAKTCRLILCCDSMSKVMEPVRSRCLGIRVPAPTHIEISNVLIKTARRTEHTLPEEVASNIARSCDRNLRRAILMLEAMSTQGLTKDQPVPVTDWELYIRQIAIDITKEQSPQRLAATREKMYELLVNCIPPTIVLKTLVREL-----LRNLD-DTLKPSVVEWAAFYEHRIAMGSKEIFHLEAFVAKYMALYKKYLNDLF 353          
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Match: A0A835YV35_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV35_9STRA)

HSP 1 Score: 214 bits (545), Expect = 3.990e-63
Identity = 140/376 (37.23%), Postives = 201/376 (53.46%), Query Frame = 1
Query:    1 MHAEISERLSLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHVASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDTFVVQQTIKEMAANGSIAAVLMDSAV---------------------THKTIVLRGAGDISKQAQAGLRRTMETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSP---TNLAVAVRSQLGNGGQEGLAEDIVLRSGRSISRAMHMAREGNNDE-----------VKWVQYIDFVCTGVFLEQSPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAEIVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQF 1023
            +H +++ERL +MS+ G+IPHLLF+GP G+GK + +  LL +++GPG   V  E R   T S+ +            IE+    SNYHIE+ P  AG+ D FVVQ+ IKE+A + S+ A +  +A                      T K ++L G   ++KQAQA LRRTME  + SCRLIL     S+VI+P+RSRC+ +RVP PS    T +  AV  + G      LA  I   SGR++ RA+ M      ++             W  YI+ +   +  EQSP+ L+  R  L ELL   + A ++L+ L  +L+   AL   DA  +K E+  WAA Y+ RL   ++ +  LEAFVA FM L+K F V+ F
Sbjct:   17 VHPDLTERLKIMSKDGEIPHLLFYGPSGAGKRTRILALLKEIFGPGAERVHLEHRTFKTPSNRT------------IELTTVASNYHIEMSPGDAGTYDRFVVQEVIKEIAGSTSLTATMGGNAXXXXXXXXXXXXXXXXXXXXKPTFKVVLLTGVDSLTKQAQAALRRTMEKYTSSCRLILCCNSISKVIDPVRSRCLSVRVPAPSEPEITGVLGAVARKEGVALPAELAARISRASGRNLRRALLMLEACKVEQSPLLANQRVALADWETYIESLAKDITQEQSPQALVAARGKLYELLVNCIPADVVLRRLARELI---ALMADDA--LKHEVAHWAAFYDTRLRQSAKEVFQLEAFVAKFMMLYKAFIVSMF 375          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4973.12953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNA1_ESV1K3.100e-14766.57EsV-1-187 n=3 Tax=root TaxID=1 RepID=Q8QNA1_ESV1K[more]
A0A6H5JU66_9PHAE5.270e-13562.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRR8_ECTSI9.940e-11466.31EsV-1-187 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G7C2_ECTSI1.240e-7342.70Rep_fac_C domain-containing protein n=2 Tax=Ectoca... [more]
F0XVP2_AURAN9.740e-6841.01AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
B7FSY5_PHATC1.220e-6739.89Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
K0TFT7_THAOC1.810e-6439.10Rep_fac_C domain-containing protein n=1 Tax=Thalas... [more]
A0A7S4V0A9_9STRA1.460e-6338.99Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5KQG3_FISSO1.630e-6338.42Replication factor C subunit 3/5 n=2 Tax=Fistulife... [more]
A0A835YV35_9STRA3.990e-6337.23P-loop containing nucleoside triphosphate hydrolas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4973contigL-elsbetiae_contig4973:1224..2252 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score430.6
Seed ortholog evalue6.7e-118
Seed eggNOG ortholog2880.D8LPK6
Preferred nameRFC3
KEGG koko:K10756
KEGG Pathwayko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG ModuleM00289,M00295
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000723,GO:0000731,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003689,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006275,GO:0006281,GO:0006283,GO:0006289,GO:0006296,GO:0006297,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019725,GO:0019985,GO:0022402,GO:0022616,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031389,GO:0031390,GO:0031391,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032991,GO:0032993,GO:0033170,GO:0033260,GO:0033554,GO:0033683,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0042221,GO:0042276,GO:0042592,GO:0042623,GO:0042769,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043599,GO:0043601,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045935,GO:0046483,GO:0046683,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051338,GO:0051347,GO:0051606,GO:0051716,GO:0060249,GO:0060255,GO:0061860,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070914,GO:0070987,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090618,GO:0097159,GO:0098813,GO:0104004,GO:1900262,GO:1900264,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1904949,GO:2000112,GO:2000278,GO:2000573
EggNOG free text desc.DNA replication
EggNOG OGsCOG0470@1,KOG2035@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko03400
Exons1
Model size1029
Cds size1029
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816497.7622635-CDS-L-elsbetiae_contig4973:1223..22521622816497.7622635-CDS-L-elsbetiae_contig4973:1223..2252Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4973 1224..2252 -
1691683602.8245814-CDS-L-elsbetiae_contig4973:1223..22521691683602.8245814-CDS-L-elsbetiae_contig4973:1223..2252Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4973 1224..2252 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4973.12953.1prot_L-elsbetiae_contig4973.12953.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig4973 1224..2252 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig4973.12953.1

>prot_L-elsbetiae_contig4973.12953.1 ID=prot_L-elsbetiae_contig4973.12953.1|Name=mRNA_L-elsbetiae_contig4973.12953.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=343bp
MHAEISERLSLMSRHGDIPHLLFHGPRGSGKMSLVKHLLYKLYGPGVNHV
ASEKRVVDTLSSASPSSSAVSSSQSKIEIDVRVSNYHIEIEPSAAGSKDT
FVVQQTIKEMAANGSIAAVLMDSAVTHKTIVLRGAGDISKQAQAGLRRTM
ETLSGSCRLILVSTFCSRVIEPLRSRCVCIRVPLPSPTNLAVAVRSQLGN
GGQEGLAEDIVLRSGRSISRAMHMAREGNNDEVKWVQYIDFVCTGVFLEQ
SPRKLMDVRESLNELLAAGVSATIILKTLVHKLVEHEALRDADAEKIKAE
IVEWAADYEHRLSVGSRPILHLEAFVACFMDLFKKFTVNQFL*
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mRNA from alignment at L-elsbetiae_contig4973:1224..2252-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig4973.12953.1 ID=mRNA_L-elsbetiae_contig4973.12953.1|Name=mRNA_L-elsbetiae_contig4973.12953.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1029bp|location=Sequence derived from alignment at L-elsbetiae_contig4973:1224..2252- (Laminarionema elsbetiae ELsaHSoW15)
ATGCACGCCGAGATCTCCGAGCGTCTTTCGCTGATGTCACGGCACGGCGA CATCCCTCACTTGCTTTTCCACGGTCCGCGCGGGTCGGGCAAGATGAGTC TTGTGAAACACCTCTTGTACAAACTCTACGGCCCGGGCGTGAACCACGTG GCGTCCGAGAAACGCGTGGTCGACACGCTGTCGTCTGCATCGCCATCGTC ATCCGCGGTATCGTCGTCACAATCCAAGATTGAGATAGATGTTCGCGTGT CCAACTACCACATCGAGATTGAACCTAGCGCCGCCGGCAGCAAAGACACT TTCGTGGTTCAGCAGACGATCAAGGAGATGGCCGCGAACGGGTCCATCGC CGCGGTGCTGATGGACTCCGCCGTCACACACAAGACGATCGTGCTCAGGG GAGCCGGGGACATCTCCAAGCAGGCACAGGCGGGCCTGCGGCGGACGATG GAGACGTTGTCAGGTTCCTGTCGCCTGATTCTGGTCTCCACCTTTTGCTC GAGGGTGATCGAGCCCCTCCGGTCGCGGTGCGTCTGCATCCGCGTCCCTC TCCCGTCGCCCACAAATTTGGCCGTCGCGGTGAGGTCGCAGCTCGGCAAT GGCGGGCAAGAAGGGCTGGCGGAGGATATAGTGCTGCGTTCCGGGCGCTC CATCTCCCGCGCCATGCACATGGCAAGGGAGGGCAACAATGACGAGGTGA AGTGGGTGCAGTACATCGATTTCGTCTGCACCGGTGTTTTCCTGGAGCAG AGCCCGCGCAAGCTGATGGACGTCCGCGAGAGTCTGAACGAGCTGCTGGC GGCGGGCGTGTCGGCCACTATTATTCTCAAGACGCTGGTGCACAAGCTTG TGGAGCACGAGGCGCTCCGGGACGCCGACGCCGAAAAAATCAAGGCGGAG ATTGTAGAGTGGGCCGCCGACTACGAGCACCGTCTGAGCGTGGGGTCGAG GCCCATTCTGCACCTCGAGGCGTTCGTCGCCTGCTTTATGGATTTGTTCA AGAAGTTTACAGTCAATCAGTTTTTGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig4973:1224..2252-

>mRNA_L-elsbetiae_contig4973.12953.1 ID=mRNA_L-elsbetiae_contig4973.12953.1|Name=mRNA_L-elsbetiae_contig4973.12953.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2058bp|location=Sequence derived from alignment at L-elsbetiae_contig4973:1224..2252- (Laminarionema elsbetiae ELsaHSoW15)
ATGCACGCCGAGATCTCCGAGCGTCTTTCGCTGATGTCACGGCACGGCGA
CATCCCTCACTTGCTTTTCCACGGTCCGCGCGGGTCGGGCAAGATGAGTC
TTGTGAAACACCTCTTGTACAAACTCTACGGCCCGGGCGTGAACCACGTG
GCGTCCGAGAAACGCGTGGTCGACACGCTGTCGTCTGCATCGCCATCGTC
ATCCGCGGTATCGTCGTCACAATCCAAGATTGAGATAGATGTTCGCGTGT
CCAACTACCACATCGAGATTGAACCTAGCGCCGCCGGCAGCAAAGACACT
TTCGTGGTTCAGCAGACGATCAAGGAGATGGCCGCGAACGGGTCCATCGC
CGCGGTGCTGATGGACTCCGCCGTCACACACAAGACGATCGTGCTCAGGG
GAGCCGGGGACATCTCCAAGCAGGCACAGGCGGGCCTGCGGCGGACGATG
GAGACGTTGTCAGGTTCCTGTCGCCTGATTCTGGTCTCCACCTTTTGCTC
GAGGGTGATCGAGCCCCTCCGGTCGCGGTGCGTCTGCATCCGCGTCCCTC
TCCCGTCGCCCACAAATTTGGCCGTCGCGGTGAGGTCGCAGCTCGGCAAT
GGCGGGCAAGAAGGGCTGGCGGAGGATATAGTGCTGCGTTCCGGGCGCTC
CATCTCCCGCGCCATGCACATGGCAAGGGAGGGCAACAATGACGAGGTGA
AGTGGGTGCAGTACATCGATTTCGTCTGCACCGGTGTTTTCCTGGAGCAG
AGCCCGCGCAAGCTGATGGACGTCCGCGAGAGTCTGAACGAGCTGCTGGC
GGCGGGCGTGTCGGCCACTATTATTCTCAAGACGCTGGTGCACAAGCTTG
TGGAGCACGAGGCGCTCCGGGACGCCGACGCCGAAAAAATCAAGGCGGAG
ATTGTAGAGTGGGCCGCCGACTACGAGCACCGTCTGAGCGTGGGGTCGAG
GCCCATTCTGCACCTCGAGGCGTTCGTCGCCTGCTTTATGGATTTGTTCA
AGAAGTTTACAGTCAATCAGTTTTTGTGAATGCACGCCGAGATCTCCGAG
CGTCTTTCGCTGATGTCACGGCACGGCGACATCCCTCACTTGCTTTTCCA
CGGTCCGCGCGGGTCGGGCAAGATGAGTCTTGTGAAACACCTCTTGTACA
AACTCTACGGCCCGGGCGTGAACCACGTGGCGTCCGAGAAACGCGTGGTC
GACACGCTGTCGTCTGCATCGCCATCGTCATCCGCGGTATCGTCGTCACA
ATCCAAGATTGAGATAGATGTTCGCGTGTCCAACTACCACATCGAGATTG
AACCTAGCGCCGCCGGCAGCAAAGACACTTTCGTGGTTCAGCAGACGATC
AAGGAGATGGCCGCGAACGGGTCCATCGCCGCGGTGCTGATGGACTCCGC
CGTCACACACAAGACGATCGTGCTCAGGGGAGCCGGGGACATCTCCAAGC
AGGCACAGGCGGGCCTGCGGCGGACGATGGAGACGTTGTCAGGTTCCTGT
CGCCTGATTCTGGTCTCCACCTTTTGCTCGAGGGTGATCGAGCCCCTCCG
GTCGCGGTGCGTCTGCATCCGCGTCCCTCTCCCGTCGCCCACAAATTTGG
CCGTCGCGGTGAGGTCGCAGCTCGGCAATGGCGGGCAAGAAGGGCTGGCG
GAGGATATAGTGCTGCGTTCCGGGCGCTCCATCTCCCGCGCCATGCACAT
GGCAAGGGAGGGCAACAATGACGAGGTGAAGTGGGTGCAGTACATCGATT
TCGTCTGCACCGGTGTTTTCCTGGAGCAGAGCCCGCGCAAGCTGATGGAC
GTCCGCGAGAGTCTGAACGAGCTGCTGGCGGCGGGCGTGTCGGCCACTAT
TATTCTCAAGACGCTGGTGCACAAGCTTGTGGAGCACGAGGCGCTCCGGG
ACGCCGACGCCGAAAAAATCAAGGCGGAGATTGTAGAGTGGGCCGCCGAC
TACGAGCACCGTCTGAGCGTGGGGTCGAGGCCCATTCTGCACCTCGAGGC
GTTCGTCGCCTGCTTTATGGATTTGTTCAAGAAGTTTACAGTCAATCAGT
TTTTGTGA
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