mRNA_L-elsbetiae_contig4970.12951.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 119 bits (298), Expect = 2.890e-30 Identity = 73/160 (45.62%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 13 YPDTRNRSGATPLFASILACRLSCSPRTTRLLVDAGADTT--IKVSEDEGDVLSNRTPLAFVTGLLRDATIGENKATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAAAAEGTCKPKVTSGPLTSMMPILRRRTRRPRVLLGALFRATKKPDG 486 Y ++ + SG TPL SI C S +PR RLLVDAGADTT ++V+ G V N TPLA T LLR+ + ATEEQL+ ++ RR+L+RVDA+ AVSWLWP DA S A E +C P+ PL+ +PIL+RR + V + L R++ G Sbjct: 54 YANSSDGSGMTPLSCSIEWCS-SGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAV--ERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSSPISSG 210
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 103 bits (257), Expect = 5.940e-23 Identity = 65/163 (39.88%), Postives = 95/163 (58.28%), Query Frame = 1 Query: 13 YPDTRNRSGATPLFASILACRL---SCSPRTTRLLVDAGADTTIKV--SEDEGDVLSNRTPLAFVTGLLRDATIGENKATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAA--AAEGTCKPKVTSGPLTSMMPILRRRTRRPRVLLGALFRATKKP 480 Y + R+R+G TPL +SI C + S PR RLLV+AGADTT ++ + G VL + TPL +L+D + ++++L +EG RR+L++V+A+ A SWLWP + + AAE T + L ++PILRRR RRP V+ AL R +KP Sbjct: 262 YVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 101 bits (252), Expect = 3.280e-22 Identity = 71/163 (43.56%), Postives = 93/163 (57.06%), Query Frame = 1 Query: 7 AGYPDTRNRSGATPLFASILACRLSCSPRTTRLLVDAGADTTIKVSEDE---GDVLSNRTPLAFVTGLLRDAT--IGENKATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAAAAEGTCKPKVTSGPLTSMMPILRRRTRRPRVLLGALFRATKKP 480 A Y +TR+R G TPL I R PR RLLV+AGADTT V+ GD +S TPL +RD +G A+ EQL+ +E RR+L+RV+A+ AVSWLWP D ++ +AAA GT + S +T M + RRR R +V L AL R + KP Sbjct: 279 AAYVNTRDRGGVTPLLWGIQHYR----PRVVRLLVEAGADTTSPVAVRNQLGGDDVSI-TPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA-RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 1.800e-21 Identity = 66/154 (42.86%), Postives = 88/154 (57.14%), Query Frame = 1 Query: 25 RNRSGATPLFASILACRLS-CSPRTTRLLVDAGADTT--IKVSEDEGDVLSNRTPLAFVTGLLRDATIGENKATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAAAAEGTCKPKVTSGPLTSMMPILRRRTRRPRVLLGALFRATKK 477 R+ G T L S + C+PR TR LVDAGADTT +++ N TPL +V T G++ AT+EQL +E TRRVL+RV A+ AVSW+WP DA + A + T K T LT+++P+LRRR R +L LFR +KK Sbjct: 254 RDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQ--LTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: D7FYA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA6_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.860e-20 Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 13 YPDTRNRSGATPLFASILACRLSCSPRTTRLLVDAGADT--TIKVSEDEGDVLSNRTPLAFVTGLLRDATIGENKATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAAAAEGTCKPK---VTSGPLTSMMPILRRRTRRPRVLLGALFR 465 Y + ++ G TP+ SI LS SPR RL +DAGADT T++++ EG + + TPLA+ T LLRD +T+ Q ++ R+L++++AIRAVSW W DA+S + A +GT + K T PL +P RRR R RVL+ A+ R Sbjct: 412 YVNKKHPDGRTPVVCSIGRALLSGSPRVLRLFLDAGADTASTVRIANKEGVEVFSGTPLAYTTWLLRDQQAQAIDSTKGQPCGLKAVCRMLLQLEAIRAVSWCWQSDASSPIERAVMDGTPRAKSKLTTDPPLGLTLPRTRRRARAHRVLVMAISR 567
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 3.160e-20 Identity = 66/158 (41.77%), Postives = 90/158 (56.96%), Query Frame = 1 Query: 13 YPDTRNRSGATPLFASILACRLSCSPRTTRLLVDAGADTT--IKVSEDEGDVLSNRTPLAFVTGLLRDATIGENK-ATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAAAAEGTCKPKVTSGPLTSMMPILRRRTRRPRVLLGALFRATKK 477 Y + R+ +G TPL C S +PR R+LVDAGADTT ++V +G V+ N TPLAF LR + + K AT+E L +E R+L+RVDA+ AVSWLWP A +A + P+ L M+PIL+RRT+R L+ L R + K Sbjct: 374 YLNARDVNGYTPLVVCTQGC-FSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETD----PEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 3.190e-19 Identity = 63/161 (39.13%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 13 YPDTRNRSGATPLFASILACRLSCSPRTTRLLVDAGADT--TIKVSEDEGDVLSNRTPLAFVTGLLRDATIGENKATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAAAAEGTCKPK---VTSGPLTSMMPILRRRTRRPRVLLGALFRATKKP 480 Y + + G TP+ I S SPR RL +DAGADT T++++ EG L TPLA+ T LLRD +T+ + S+E RR+L++++AIRAVSW W DA S+ + A +G + K PL +P RR+ R RVL+ A+ R ++KP Sbjct: 440 YVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQLFRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLP-RRRKARARRVLVMAMSRYSRKP 599
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 2.480e-17 Identity = 56/121 (46.28%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 4 GAGYPDTRNR--SGATPLFASILACRLSCSPRTTRLLVDAGADTT--IKVSEDEGDVLSNRTPLAFVTGLLRDATIGENK-ATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAA 351 G Y +R SG T L SI C LS +PR RLL++AGADTT I+ + EG+V N TPLA T L + + + ATEE L +E RR+L+R +A+ AVSWLWP DA+ AA Sbjct: 257 GVEYASINDRISSGLTALVFSIQRC-LSQTPRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAA 376
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: D7G1Y3_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y3_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 1.250e-16 Identity = 60/143 (41.96%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 46 PLFASI-LACRLSCSPRTTRLLVDAGADT--TIKVSEDEGDVLSNRTPLAFVTGLLRDATIGENKATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAAAAEGTCKPKVTSGPLTSMMPILRRRTRRPRVLLGALFR 465 PL SI + C PR RLLVD+GADT ++ + +G V + TPL +LRD EEQL +E RR+L+RV+A+ A SW+WP AA + AAE + LTS + ILRRR R VLL AL R Sbjct: 229 PLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLVGFSDTPLCRTIRILRDVETEGKDDKEEQLGRLEAVRRLLLRVEAVHATSWVWPSSAAGSVAQDAAEVKAGAETEPTRLTSTLQILRRRATRRGVLLRALSR 371
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 5.440e-16 Identity = 58/145 (40.00%), Postives = 77/145 (53.10%), Query Frame = 1 Query: 52 FASILACRLSCSPRTTRLLVDAGADTTIKVSEDEGDVLSNRTPLAFVTGLLRDATIGENKATEEQLNSMEGTRRVLMRVDAIRAVSWLWPRDAASADQAAAAEGTCKPKVTSGPLTSMMPILRRRTRRPR--VLLGALFRATKKP 480 F +I C PR RLLV+AGADTT V D N TP+ LL D +G TEEQLN++E R+L+RV+A+ AVSWLW D + + A +GT + S T ++ +R+R R V L AL R + KP Sbjct: 190 FDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPGTDNITPMGLTMLLLHD--LGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTA-QGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSKP 331 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4970.12951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4970.12951.1 >prot_L-elsbetiae_contig4970.12951.1 ID=prot_L-elsbetiae_contig4970.12951.1|Name=mRNA_L-elsbetiae_contig4970.12951.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp QGAGYPDTRNRSGATPLFASILACRLSCSPRTTRLLVDAGADTTIKVSEDback to top mRNA from alignment at L-elsbetiae_contig4970:11447..12242+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4970.12951.1 ID=mRNA_L-elsbetiae_contig4970.12951.1|Name=mRNA_L-elsbetiae_contig4970.12951.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=796bp|location=Sequence derived from alignment at L-elsbetiae_contig4970:11447..12242+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4970:11447..12242+ >mRNA_L-elsbetiae_contig4970.12951.1 ID=mRNA_L-elsbetiae_contig4970.12951.1|Name=mRNA_L-elsbetiae_contig4970.12951.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig4970:11447..12242+ (Laminarionema elsbetiae ELsaHSoW15)back to top |