prot_L-elsbetiae_contig497.12948.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig497.12948.1
Unique Nameprot_L-elsbetiae_contig497.12948.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1006
Homology
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BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 5.640e-10
Identity = 55/160 (34.38%), Postives = 71/160 (44.38%), Query Frame = 0 
Query:  654 CLPEFTQDGFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGGFNCLNPAVAGSDMDCRTKIRTCLADPVCAPCATNADPDGTCD--NAHWTCSELGDHFC---CVVGD--------------SCRDNTLLVDFLGCVTREQGCQLGDDICDIE 794
            C  ++ +DGFCD  NN+ SC +DGGDCCE +C DGP++ C  +     GF CL+P       DC     T   +  C     N   DG CD  N + +C   G   C   CV G               +C D  L+ +F  C     G  LGD  CD E
Sbjct:   87 CHEDWAKDGFCDLVNNHPSCDYDGGDCCECSCIDGPDYGCGSI-----GFACLDP-------DCGNTTETAPENTTCEESWMN---DGYCDSSNNYPSCDYDGGDCCECSCVDGHDYECGSNGFSCLDPACFDPALVAEFPDCDAGWLG--LGDGFCDSE 229
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BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: A0A6H5JE55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE55_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 6.930e-9
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 0 
Query:  717 CRTKIRTCLADPVCAPCATNADPDGTCDN-AHWTCSELGDHFCCVVGDSCRDNTLLVDFLGCVTREQGCQLGDDICDIED 795
            C  +++ C+AD  C  C  N   D  CD+ A  TCS + D+ CCV GDSC +NTL+V ++ C   + GC + +D+CD  D
Sbjct:   90 CNAEVQACVADQDCFTCVQN---DAVCDSSATATCSGVMDYLCCVFGDSCSENTLVVAYIDCTLDDYGCSVDNDLCDTGD 166
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BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: A0A7S1TXY0_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXY0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.210e-7
Identity = 39/110 (35.45%), Postives = 52/110 (47.27%), Query Frame = 0 
Query:  653 GCLPEFTQDGFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGGFNCLNP--------AVAGSDMDCRTKIRTCLAD--PVCAPCATNADPDGTCDNAHWTCSE 752
            G    +T DG+CD E N  +CG+DGGDCCE+TC  G    C     G  G+NC+NP        A+     +    I  C  D    CA    +AD    C  A +TC++
Sbjct:  490 GLFETYTADGYCDPEMNTDACGWDGGDCCEQTCVSGSPFTC-----GVNGYNCVNPTGDCDFATALGNGVCNLEANIDECSWDGGDCCASTCNHAD----CATATFTCTD 590
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BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.750e-7
Identity = 30/67 (44.78%), Postives = 37/67 (55.22%), Query Frame = 0 
Query:  650 ICDGCLPEFTQDGFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGGFNCLNPAVAGSDMD 716
            I + C      +GFCD +NNN +C +DGGDCCE TCED PN  C        GF C++P     D D
Sbjct:  196 IVENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRW----SGFACIDPEAPCVDED 258
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BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: A0A383EJG0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383EJG0_9ZZZZ)

HSP 1 Score: 63.2 bits (152), Expect = 3.100e-7
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:  649 TICDGCLPEFTQDGFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGG--FNCLNPAV 710
            + CDG    +  DG+CD+ NNN +CG+DGGDCCE+TC DG ++ CN       G  F+C +P V
Sbjct:   32 SACDG-NSSWVGDGYCDSNNNNQACGYDGGDCCEQTCVDG-DYTCNSGAASGWGNIFDCNDPNV 93
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BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 5.080e-7
Identity = 33/84 (39.29%), Postives = 44/84 (52.38%), Query Frame = 0 
Query:  654 CLPEFTQDGFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGGFNCLNPAVAGSDMDCRTKIRTCLADPVCAPCATNA 737
            C+  +  DG+CD ENNNA C +DGGDCCE TC D      ++   G  GF+CL+P+         T +  C   P   PC+  A
Sbjct: 1972 CIGVYVTDGWCDLENNNAECNWDGGDCCECTCVD------SQYECGIQGFSCLDPSA--------TDLYDCGETPAATPCSAEA 2041
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BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.340e-6
Identity = 31/72 (43.06%), Postives = 41/72 (56.94%), Query Frame = 0 
Query:  645 DMRDTICDGCLPEFTQDGFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGGFNCLNPAVAGSDMD 716
            D+   + + C      DG+CD +NNNA+C +DGGDCCE TCE  PN+ C     G  GF C++P     D D
Sbjct:  169 DITVDVDESCDAVGMGDGYCDMDNNNAACAYDGGDCCECTCE--PNNKCG----GRSGFACIDPGAPCVDDD 234
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BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: F0YPV8_AURAN (LNR domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPV8_AURAN)

HSP 1 Score: 62.8 bits (151), Expect = 3.650e-6
Identity = 32/67 (47.76%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:  647 RDTICDGCL---PEFTQDGFCDT-ENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGGFNCLNPA 709
            R T+   CL   P +  DG CD    N+ +CG+DGGDCCE TCEDGP H C     G   + CL+PA
Sbjct:  633 RPTVPSTCLVPHPAYVGDGACDPGAYNSEACGYDGGDCCESTCEDGPVHAC-----GRTAYACLDPA 694
[Close]
BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 5.510e-6
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0 
Query:  650 ICDGCLPEFTQDGFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGGFNCLNPAVAGSDMD 716
            + + C      DG+C+ +NNN +C +DGGDCCE TCED PN+ C         F C++PA    D D
Sbjct:  210 MVESCDTVSIGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNRCGRW----SSFACIDPAAPCVDDD 272
[Close]
BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.210e-5
Identity = 44/137 (32.12%), Postives = 59/137 (43.07%), Query Frame = 0 
Query:  662 GFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGAGGFNCLNPAVAGSDMDCRTKIR---TCLADPVCAPCATNADPDGTCDNAHWTCSELGDHFCCVVGD-SCRDNTLLVDFLGCVTREQGCQLGDDICDIE 794
            G CD   N ASCG+DGGDCC  TC DGP H+C +        +C +PAV  SD  C   ++    C  +   A C  +      C        E G        D +C D  L+ +F  C       ++GD  C+ E
Sbjct:   43 GNCDAALNVASCGYDGGDCCSCTCNDGPLHLCADSDFDCMYPDCGDPAVTSSDAVCYEDVQGDGMCNEENNSAACGYDGGDCCECSCVDGPLFECGSFSIFDCRDPACYDPALVAEFPDCTG--DWFKIGDGACNPE 177
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig497.12948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G5Y7_ECTSI5.640e-1034.38Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JE55_9PHAE6.930e-941.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TXY0_9STRA1.210e-735.45Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
D7G0S4_ECTSI1.750e-744.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A383EJG0_9ZZZZ3.100e-746.88Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
D7FHG7_ECTSI5.080e-739.29LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4F9_ECTSI1.340e-643.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YPV8_AURAN3.650e-647.76LNR domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A6H5JM92_9PHAE5.510e-641.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSC0_ECTSI1.210e-532.12Polymorphic Outer membrane protein G/I family n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 75..101
e-value: 610.0
score: 1.0
coord: 451..473
e-value: 580.0
score: 1.2
coord: 243..269
e-value: 540.0
score: 1.4
coord: 403..429
e-value: 0.95
score: 18.5
coord: 171..189
e-value: 31.0
score: 11.6
NoneNo IPR availablePANTHERPTHR24369:SF102LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4Bcoord: 119..303
coord: 37..246
NoneNo IPR availablePANTHERPTHR24369FAMILY NOT NAMEDcoord: 240..459
coord: 448..623
NoneNo IPR availablePANTHERPTHR24369:SF102LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4Bcoord: 240..459
NoneNo IPR availablePANTHERPTHR24369:SF102LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4Bcoord: 448..623
NoneNo IPR availablePANTHERPTHR24369FAMILY NOT NAMEDcoord: 37..246
NoneNo IPR availablePANTHERPTHR24369FAMILY NOT NAMEDcoord: 119..303
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 377..628
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 49..311
IPR000800Notch domainSMARTSM00004NL_2coord: 640..681
e-value: 0.0048
score: 19.5
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 195..218
e-value: 7.2E-5
score: 32.2
coord: 219..242
e-value: 0.0016
score: 27.7
coord: 379..402
e-value: 14.0
score: 12.0
coord: 475..499
e-value: 33.0
score: 9.0
coord: 171..194
e-value: 0.004
score: 26.4
coord: 75..98
e-value: 2.3
score: 17.2
coord: 451..474
e-value: 0.027
score: 23.7
coord: 608..632
e-value: 220.0
score: 2.2
coord: 403..426
e-value: 0.049
score: 22.8
coord: 584..607
e-value: 30.0
score: 9.3
coord: 427..450
e-value: 0.19
score: 20.8
coord: 267..290
e-value: 2.0E-4
score: 30.7
coord: 99..122
e-value: 24.0
score: 10.2
coord: 243..266
e-value: 0.0025
score: 27.1
coord: 147..170
e-value: 0.0061
score: 25.8
coord: 123..146
e-value: 0.26
score: 20.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 245..302
e-value: 2.8E-11
score: 43.0
coord: 149..208
e-value: 2.9E-10
score: 39.7
coord: 429..487
e-value: 1.0E-10
score: 41.2
coord: 55..108
e-value: 8.0E-8
score: 31.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 453..474
score: 6.549
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 293..315
score: 4.593
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 197..218
score: 6.172
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 586..607
score: 5.024
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 77..98
score: 5.171
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 610..632
score: 6.334
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 173..194
score: 6.426
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 405..426
score: 5.902
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 149..170
score: 5.602
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 101..122
score: 4.624
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 245..266
score: 6.957
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 429..450
score: 6.026
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 125..146
score: 5.802
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 269..290
score: 7.158
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 221..242
score: 6.95
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 535..633
e-value: 2.6E-8
score: 35.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 170..314
e-value: 3.8E-40
score: 139.2
coord: 348..527
e-value: 1.1E-30
score: 108.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..169
e-value: 1.6E-27
score: 97.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig497contigL-elsbetiae_contig497:3511..38354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig497.12948.1mRNA_L-elsbetiae_contig497.12948.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig497 3511..38354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig497.12948.1 ID=prot_L-elsbetiae_contig497.12948.1|Name=mRNA_L-elsbetiae_contig497.12948.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1006bp
VKDCLDLSNDGSKCSLSIADGHNLDLSQCRISGTELQGLEKCFHKFIDNN
NATHEVNLLGNRLENVLSAGFFARFSGLEYLDLGDSRIRTLPYGVFDGLD
SLKKLDFNINSMKKLTVGTFDSLITLKHLNFRRNKLTTLPLGVFDSLTSL
RVLDFRRNKLKTMPAAVFDSLTNLTVLDFERNKLEELHVEIFHSLTSLEK
LDLGLNNLAALPDGVFDHLTSLHTLHLSLNDLSELPAGIFHNLTSLEHLF
LHCNGITKLPAAIFDSLTSLKTLSLSENDLHELPAGIFSSLKSLKKLWVD
DNPDLLCLPTVPSSVTQLKVDDHVGVCVDVLPCFNPKSDKYSCELINGEI
NLSNCGLTNDHGHELLIRECFKTASSNKLDKIISVDMGKNNFKTLPEGMF
HGLTKLNNLFLGHNGLETMPKRIFQNLNHLGMLSLHDNYLETLPHEIFDS
LEKLTELDLSTNYLPTVSDGIFRSLTSLKKLLLNDNDGLSILPAWSFDSL
EALEILWVNDNPDLLCLPTVPSTVTVLKVDDHVGRHCACFDPTCHDYRCD
LKHGHKIDLSSCGLTDGHGDLLKACFDTATEGHLGMIKHLSLRNNHLVSP
PTELLEGMQNLEKLNLEHNCDLKCIPATDEHCDPRVLLTEHCNRDMRDTI
CDGCLPEFTQDGFCDTENNNASCGFDGGDCCEETCEDGPNHICNEVIDGA
GGFNCLNPAVAGSDMDCRTKIRTCLADPVCAPCATNADPDGTCDNAHWTC
SELGDHFCCVVGDSCRDNTLLVDFLGCVTREQGCQLGDDICDIEDAYEHE
DQTCNAALEEHEGCPTGQISKVGVDSITCTGTCSPIDCCIEDGQDGLEEE
EKATSAGFCAPDVPGILKTVGNGIDVCCNPGCTQCGGPRCGSTTPGLRSG
DCCTSSIIRKGHECGVAPCILHGQDGPEEEEEAPSDDGFCAPGIPGIFGT
TVKGVELCCHPGCKQCGGPGCGTATPGLGSSACCHQRIARRGKECGVAPC
ILPGEH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf