prot_L-elsbetiae_contig4965.12941.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4965.12941.1
Unique Nameprot_L-elsbetiae_contig4965.12941.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length563
Homology
BLAST of mRNA_L-elsbetiae_contig4965.12941.1 vs. uniprot
Match: A0A6H5JQ29_9PHAE (DENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ29_9PHAE)

HSP 1 Score: 535 bits (1379), Expect = 2.600e-177
Identity = 370/580 (63.79%), Postives = 397/580 (68.45%), Query Frame = 0
Query:    1 MCERPVLVTCSVRSLLSVAASSLKALLHPLGWHHAYAPLLPAAEVVGFWRSKVALDKKVALSQGRSGSPPRIAPGSWGARGHGARXXXXXXXXXXXXXXXPPPRAGPQ-TPFLVGLDAELVRMATGKATDGGGSAGGARRQGAKAGVGVGGSGTGEVWGVASSESCMVPAGAEQ-AGSSGMATTQPSPTLLEVVRRMLKQSVHVDLDHDEVTWPDP----PATSPGVEGGMMSKADSLGFEKEREXXXXXXXXXAPGAGRRD--------APPAWPEEAARRARRVVQSTLFPEFESFDGVFEAPPEAIGGADFDDD---SALFKCSGLSGGGAEASLRDKIEASRLSASALTPPRENLGGGAATGAGTTLTESIVGMYIPTPADLALRAAAAGLVASVLGRVKEFTTLFAQAGLMRFDTARFVTAVASRNSSGGKNLAAANTGNPDFFGXXXAAESATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNASGSGTATAKDESAPVVVGEAG-DDGSSAEGGGEGSRLWGVPGTEMCLELVRTRAFAALLSDEVFADVDLETVQEELRLHSRQIRKSTSS 562
            MCERPVLVTCSVRSLLS+A SSLKALLHPL WHHAYAPLLPAAEVV FWRSKVALDKK AL+ GRSGSPPRI PGSWGA G G R    XXXX       PPP    + TPFLVGLD ELVRMA               R G       GGSG G VWGVASSE CMVP GAE+ AG+SG+ATTQPSP LLEVVR ++KQSVHVDLDHD++TWP P    P+T+        SK DSLG  KE++  X          G            P  WPEEAARRARRVVQSTLFP+FE+FD V E PP+     DFD     SALFKCSGLSGGGAEASLRDK+EA R SA+A +  R  + GGA      TLTESIVGMYIPT ADLALRAA AGLVASVLGRVKEFTTLFAQAGLMRFDTA FV AVA+R   GG    A   GN    G          XXXXXXXXXXXXXXXXXXXXX              + T  DE+APVVVG A  DDG+ AEG G    L GVPGTE+C+ELVRTRAFAALLSDEVFADVDLETVQ ELRLHSRQIRKS  S
Sbjct:  454 MCERPVLVTCSVRSLLSLAVSSLKALLHPLDWHHAYAPLLPAAEVVSFWRSKVALDKKTALNHGRSGSPPRITPGSWGASGRGGRGSPGXXXX-------PPPTPRVRATPFLVGLDGELVRMAM--------------RNG-------GGSGKGVVWGVASSEPCMVPEGAEEEAGASGIATTQPSPALLEVVRCIVKQSVHVDLDHDDITWPPPQAPDPSTAXXXXXXXXSKTDSLGSGKEKKKGXEEAAGATGDEGXXXXXXXXXVGVPLVWPEEAARRARRVVQSTLFPDFETFDVVSETPPQVD---DFDXXXXXSALFKCSGLSGGGAEASLRDKVEACRTSAAAASASRRGISGGAG-----TLTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVATRGIGGGSKTDAGG-GNSVLVGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------SNTVDDEAAPVVVGAAAVDDGNVAEGAGGEGGLCGVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAPS 982          
BLAST of mRNA_L-elsbetiae_contig4965.12941.1 vs. uniprot
Match: D8LDP3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP3_ECTSI)

HSP 1 Score: 499 bits (1285), Expect = 8.320e-159
Identity = 374/571 (65.50%), Postives = 397/571 (69.53%), Query Frame = 0
Query:    1 MCERPVLVTCSVRSLLSVAASSLKALLHPLGWHHAYAPLLPAAEVVGFWRSKVALDKKVALSQGRSGSPPRIAPGSWGARGHGARXXXXXXXXXXXXXXXPPPRAGPQTPFLVGLDAELVRMATGKATDGGGSAGGARRQGAKAGVGVGGSGTGEVWGVASSESCMVPAGAEQ-AGSSGMATTQPSPTLLEVVRRMLKQSVHVDLDHDEVTWPDP--PATSPGVEG--GMMSKADSLGFEKEREXXXXXXXXXAPGAGRRD---APPAWPEEAARRARRVVQSTLFPEFESFDGVFEAPPEAIGGADFDDDSALFKCSGLSGGGAEASLRDKIEASRLSASALTPPRENLGGGAATGAGTTLTESIVGMYIPTPADLALRAAAAGLVASVLGRVKEFTTLFAQAGLMRFDTARFVTAVASRNSSGGKNLAAANTGNPDFFGXXXAAESATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNASGSGTATAKDESAPVVVGEAG-DDGSSAEGGGEGSRLWGVPGTEMCLELVRTRAFAALLSDEVFADVDLETVQEELRLHSRQIRKSTSS 562
            MCERPVLVTCSVRSLLS+A SSLKALLHPL WHHAYAPLLPAAEV        ALDKK AL+ G SGSPPR+ PGSWG  G G R    XXXXXXXXX  P  RA   TPFLVGLD ELVRMA  K   GGGS      +G KAG     +G GEVWGVASSE+CMVP GAE+ AG+SG+ATTQPSP LLEVVR M+KQSVHVDLDHD++TWP P  P T P  EG  G  +K DSLG  KE  XXXXXXXXX           APP WPEEAARRARRVV+STLFP+FE+FD V +         D DDDSALFKCSGLSGGG EASLRDK+EA R SA+A + PR  + GGA      TLTESIVGMYIPT ADLALRAA AGLVASVLGRVKEFTTLFAQAGLMRFDTA FV AVA     GG    A         GXXX       XXXXXXXXXXXXX          XXXXX                PVVVG A  DDGS AEG G    L GVPGTE+C+ELVRTRAFAALLSDEVFADVDLETVQ ELRLHSRQIRKS  S
Sbjct:  921 MCERPVLVTCSVRSLLSLAVSSLKALLHPLDWHHAYAPLLPAAEV--------ALDKKTALNHGGSGSPPRLTPGSWGPSGRGGRGSPGXXXXXXXXXT-PRVRA---TPFLVGLDGELVRMAMRK---GGGSG-----KGVKAGP----AGPGEVWGVASSEACMVPEGAEEEAGASGIATTQPSPALLEVVRCMVKQSVHVDLDHDDITWPPPQAPDTPPAEEGEGGGTAKTDSLGSGKEXXXXXXXXXXXXXXXXXXXXVGAPPVWPEEAARRARRVVKSTLFPDFETFDVVDDL--------DXDDDSALFKCSGLSGGGVEASLRDKVEACRTSAAAASAPRRGVSGGAG-----TLTESIVGMYIPTTADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVAI--CGGGSKTDA---------GXXXXXXXXXXXXXXXXXXXXXXXTGSAPSGVSEXXXXXXXXXXXXXXXXXXXXXPVVVGAAAVDDGSVAEGAGGEGGLCGVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAPS 1443          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4965.12941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQ29_9PHAE2.600e-17763.79DENN domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LDP3_ECTSI8.320e-15965.50RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11500coord: 1..51
e-value: 2.3E-7
score: 32.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..562
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4965contigL-elsbetiae_contig4965:1796..12346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4965.12941.1mRNA_L-elsbetiae_contig4965.12941.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4965 1222..12390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4965.12941.1 ID=prot_L-elsbetiae_contig4965.12941.1|Name=mRNA_L-elsbetiae_contig4965.12941.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=563bp
MCERPVLVTCSVRSLLSVAASSLKALLHPLGWHHAYAPLLPAAEVVGFWR
SKVALDKKVALSQGRSGSPPRIAPGSWGARGHGARGGGGGGGGRGSPGTP
PPPRAGPQTPFLVGLDAELVRMATGKATDGGGSAGGARRQGAKAGVGVGG
SGTGEVWGVASSESCMVPAGAEQAGSSGMATTQPSPTLLEVVRRMLKQSV
HVDLDHDEVTWPDPPATSPGVEGGMMSKADSLGFEKEREGEGGGGGGGAP
GAGRRDAPPAWPEEAARRARRVVQSTLFPEFESFDGVFEAPPEAIGGADF
DDDSALFKCSGLSGGGAEASLRDKIEASRLSASALTPPRENLGGGAATGA
GTTLTESIVGMYIPTPADLALRAAAAGLVASVLGRVKEFTTLFAQAGLMR
FDTARFVTAVASRNSSGGKNLAAANTGNPDFFGGGGAAESATPGSAGSSY
PGGDGGAASSGGAGWSGGGGARNASGSGTATAKDESAPVVVGEAGDDGSS
AEGGGEGSRLWGVPGTEMCLELVRTRAFAALLSDEVFADVDLETVQEELR
LHSRQIRKSTSS*
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