prot_L-elsbetiae_contig4950.12920.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4950.12920.1
Unique Nameprot_L-elsbetiae_contig4950.12920.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1000
Homology
BLAST of mRNA_L-elsbetiae_contig4950.12920.1 vs. uniprot
Match: D7FVK0_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK0_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 1.790e-100
Identity = 407/974 (41.79%), Postives = 464/974 (47.64%), Query Frame = 0
Query:   17 GGSK-RSSRGDVGRELLLSLAKAAEDNKSEEIEALAAKDGPHVNLSAPFGDDGLTALHRATLAGSMAALRT----------------------------LLKVGADTEVAEAAGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXRDRDGRTPLHLSIIVP-PSKPSA--PLYLLEVAGAAGSTPDAFGMTALDIAVRYGRSDVVRTMFREIGAAPLPCPANGGLLYDAVRGGDAGIVGALVGAGWEAGVP----------------PPRAQSSKSSRETAPAGCGPAPPANTXXXXXXXXXXXXXXXXXXXXXXXXGGGETLSPLMLAADSGQPDVVRAILRGPHRGFPNAADARGYTALHFAALRGSVSIAEALLGLAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEATFADPDVVNADGD-TALHVAIATRRVGVGEALLRAGASVRVANRXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAVEGAASATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGARASPKPEQRTSSRLHPSSSPKP-----SPATTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRR------NNKREGRTPLHYAAMNGRVETARALLEAGAPAAHRWNGERESPLFAAAKSGRAGVVELLLLHGLGPGD-VDAPNSAGXXXXXXXXXXXXXXXXXXXXRGGADVSRRDPSSHQSALDIA-VSVACPTSRARIVRTLLAAEAEQPDGADSDGDIGXXXXXXXXXXXXXXGRHSTPLRAACRAVWGSGEFCAVRALLEGGADADAAPPPGGE--GRRR-LRPLHIAAVHGNAGALSALTLRGCRLDAKTRDPSRSTPLVLAVQQGHTEAARVLIDAGAAIDAVPRGEDGSERAPSLARLAADMRRADLVSLLAKALLDRDSSEAWAAEWAAA 925
            GGS+ RSS+ +   ELL  L  AAE N ++EI ALAA+    V++SAP G  GL+ALHRATL+GS  ALRT                            LL+ GAD + AE  GGR                            D DGRTPL LS IV  PS P+   PL LL  AGA  +  DA G TALDIAVRYGR+++VR +F     AP P   N GLLY AVRGGDAGIV  LV  GWE GVP                PP  +S ++S    P+  G    A +                           ETLSPLMLAADSG+ DVVRA+LRG H GFPNA D RGYTALHFA +RGSV IAEALL  A                                                                    A     N +GD TA                 RAGASV +AN     XXXXXXXXXXXXXXXXXXXXXXDVAAV+G  S++XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              SP    G                                A   R      N ++EGRTPLH+AAMNGRV  AR LL AGAP AHR N +RES          A VVELLL   L PG  VDA  +AG                    R GA V  RD  +    LD+             +++TLL    + P GA +   +                  S PL AACR     G    V ALLE GAD +A+  P GE  GRRR LRPLH+AA HGNA A+ ALTL+GC LD KTRDPS STPL                       AVPRG+DG ERA SLARLAADMRR D+V+L+A+A++DRDSSE WA EWAA+
Sbjct:   31 GGSRSRSSQPECSGELLRLLGTAAEANNADEITALAARG---VDVSAPSGAGGLSALHRATLSGSTDALRTERLDIGDRSCGNNAPSSRGRVVNGLTAKLLEAGADPDAAETDGGRTALHFAALRSDLAAVQALVAAGAAKEACDLDGRTPLLLSCIVQCPSAPATTTPLCLLR-AGAVATAADAQGTTALDIAVRYGRAEIVREIFSRREGAPRPISGNLGLLYQAVRGGDAGIVACLVNNGWEGGVPVVTASLQPXXXXXVAVPPSLRSRETSGAPVPSPVGRKGAAVSSPAAVDAAGSPASVAAVR---------ETLSPLMLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEALLQGAAGFRKG--------------------------------------------------------------AGGGENNGNGDDTAXXXXXXXXXXXXXXXXXRAGASVGIANGLGHTXXXXXXXXXXXXXXXXXXXXXXDVAAVDGTESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPNAGRGRCTRVSAAALATSLASPLSKKPSQKRRASTGTAATVRRGVASPNRRKEGRTPLHFAAMNGRVGAARVLLAAGAPPAHRRNRKRESXXXXXXXXXHAEVVELLL-EALRPGTHVDAATAAGETPLGVASANGHDDVVVQLLRKGAAVVGRDDKA--PCLDLGWXXXXXXXXLTSVLKTLL---KDNPAGAGTARVL------------------SAPLHAACRG----GGRTLVEALLEKGADVNASQDPAGEEEGRRRMLRPLHVAAAHGNAEAVGALTLQGCLLDVKTRDPSGSTPLXXXXXXXXXXXXXXXXXXXXXXXAVPRGQDGKERATSLARLAADMRRGDMVALMARAIVDRDSSETWAIEWAAS 901          
BLAST of mRNA_L-elsbetiae_contig4950.12920.1 vs. uniprot
Match: A0A6H5KV34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV34_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 2.050e-95
Identity = 472/931 (50.70%), Postives = 522/931 (56.07%), Query Frame = 0
Query:   46 EIEALAAKDGPHVNLSAPFGDDGLTALHRATLAGSMAALRTLLKVGADTEVAEAAGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXRDRDGRTPLHLSIIVP-PSKPS--APLYLLEVAGAAGSTPDAFGMTALDIAVRYGRSDVVRTMFREIGAAPLPCPANGGLLYDAVRGGDAGIVGALVGAGWEAGVP-------PPRA--QSSKSSRETAPAGCGPAPPANTXXXXXXXXXXXXXXXXXXXXXXXXGG-GETLSPLMLAADSGQPDVVRAILRGPHRGFPNAADARGYTALHFAALRGSVSIAEALLGLAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEATFADPD-------------VVNADGDTALHVAIATRRVGVGEALLRAGASV--RVANRXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAVEGAASATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGARASPKPEQRTSSRLHPSSSPKPSPATTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDRR----------------NNKREGRTPLHYAAMNGRVETARALLEAGAPAAHRWNGERESPLFAAAKSGRAGVVELLLLHGLGPGD-VDAPNSAGXXXXXXXXXXXXXXXXXXXXRGGADVSRRDPSSHQSALDIAVSVACPT-SRARIVRTLLAAEAEQPDGADSDGDIGXXXXXXXXXXXXXXGRHSTPLRAACRAVWGSGEFCAVRALLEGGADADAAPPPGGEGRRRLRPLHIAAVHGNAG--ALSALTLRGCRLDAKTRDPS---RSTPLVLAVQQGHTEAARVLIDAGAAIDAVPRGEDGSERAPSLARLAADMRRADLVSLLAKALLDRDSSEAWAAEWAAA 925
            EI ALAA+    V++SAP G  GL+ALHRATL+GSM ALRTLL+              XXXXXXXXXXXXXXXXXXXXXXXXXXX     RTPL LS IV  PS P+   PL LL  AGA  +  DA G TALDIAVRYGR+ +VR +F     AP P P+N GLLY+AVRGGDAGIV  LV  GWE GVP       PP A    S  SRET+  G  P P       XXXXXXXXXXXXXXXXXXXXX   GETLSPLMLAADSG+ DVVRA+LRG H GFPNA D RGYTALHFA +RGSV IAEALL  A              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       V NADGDTALHVA+ATRR+GVG+ALLRAGASV       XXXXXXXXXXXXXXXXXXXXXXXXXX      G+  +          XXXXXXXXXXXXX                    R +                          XXXXX                           ++ RR                N ++EGRTPLH+AAMNG V  AR LL AGAP AHR N +RESPL  AAK G A VVELLL   LGPG  V+A  +AG                      G     RD  +    LDI      P      +++TL     + P GA +   +                  S PL AACR     G    V ALLE GAD +A+  P                       A+ ALTLRGC LD KTRDPS    STPL +AVQ+          DAGAAIDAVPRG+DG ERA SLARLAADMRR D+V+LLA+A++DRDSSE WA EWAA+
Sbjct:    4 EITALAARG---VDVSAPSGAGGLSALHRATLSGSMDALRTLLEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTPLLLSCIVQCPSAPAITTPLCLLR-AGAFATAADAQGTTALDIAVRYGRAAIVREIFFRREGAPRPIPSNLGLLYEAVRGGDAGIVACLVDNGWEGGVPVVTASPQPPPAVVPPSLESRETS-GGPAPLPVGRKGSAXXXXXXXXXXXXXXXXXXXXXXXXGETLSPLMLAADSGRVDVVRALLRGRHGGFPNAGDTRGYTALHFATMRGSVGIAEALLQGAAGFHKGVGGGENNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTNADGDTALHVAVATRRIGVGQALLRAGASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSDHSANAAGASGRGXXXXXXXXXXXXXGRNARDKPGGDRRAKMAAAVRVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGRGRCTRVSAAALATSLASPLSKKPSQKRRASAGTAATIRRGGGSPNRRKEGRTPLHFAAMNGSVGAARVLLAAGAPPAHRRNRKRESPLLLAAKGGHAEVVELLL-EALGPGGHVNAATAAGDTPLGVALANGHGDIVVQVIGWGV----RDDKA--LCLDIGRDDRVPPLDLTNVLKTL---PKDNPAGAGTARVL------------------SAPLHAACRG----GGRTLVEALLEKGADVNASRDPXXXXXXXXXXXXXXXXXXXXXXEAVGALTLRGCLLDVKTRDPSGWVSSTPLGIAVQEXXXXXXXXXXDAGAAIDAVPRGQDGKERATSLARLAADMRRGDMVALLARAIVDRDSSETWAREWAAS 897          
BLAST of mRNA_L-elsbetiae_contig4950.12920.1 vs. uniprot
Match: UPI001F4FF19D (poly [ADP-ribose] polymerase tankyrase-1-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F4FF19D)

HSP 1 Score: 55.8 bits (133), Expect = 7.920e-5
Identity = 34/67 (50.75%), Postives = 39/67 (58.21%), Query Frame = 0
Query:  607 GRTPLHYAAMNGRVETARALLEAGAPAAHRWNGERESPLFAAAKSGRAGVVELLLLHGLGPG--DVD 671
            G T LH+ A  G VETAR LLEAGAP      G + +PLF AA+ G A V +LLL     P   DVD
Sbjct:   91 GWTALHWTAWEGHVETARCLLEAGAPVDAWDGGLKRTPLFCAAQRGHAAVTQLLLSASADPNFKDVD 157          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4950.12920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVK0_ECTSI1.790e-10041.79Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5KV34_9PHAE2.050e-9550.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001F4FF19D7.920e-550.75poly [ADP-ribose] polymerase tankyrase-1-like n=2 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 607..622
score: 47.09
coord: 788..802
score: 38.03
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 606..636
e-value: 4.9E-5
score: 32.7
coord: 423..452
e-value: 0.37
score: 19.8
coord: 101..130
e-value: 0.36
score: 19.9
coord: 67..96
e-value: 0.19
score: 20.8
coord: 811..840
e-value: 250.0
score: 9.5
coord: 287..318
e-value: 150.0
score: 11.1
coord: 134..169
e-value: 910.0
score: 5.3
coord: 322..351
e-value: 0.64
score: 19.1
coord: 768..801
e-value: 1500.0
score: 3.8
coord: 456..485
e-value: 2.7
score: 17.0
coord: 846..875
e-value: 0.025
score: 23.7
coord: 710..743
e-value: 1800.0
score: 3.2
coord: 640..672
e-value: 0.74
score: 18.8
coord: 676..705
e-value: 0.0017
score: 27.7
coord: 170..199
e-value: 33.0
score: 13.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 606..631
score: 12.796
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 423..455
score: 11.354
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 456..488
score: 10.633
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 101..133
score: 11.781
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 846..878
score: 10.846
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 676..708
score: 12.93
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 67..99
score: 11.621
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 322..343
score: 9.137
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 389..502
e-value: 1.1E-15
score: 59.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 763..939
e-value: 3.5E-18
score: 67.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 19..344
e-value: 3.3E-40
score: 140.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 596..751
e-value: 4.8E-33
score: 116.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 35..482
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 605..875
NoneNo IPR availablePFAMPF13637Ank_4coord: 289..343
e-value: 2.7E-7
score: 31.0
NoneNo IPR availablePFAMPF13857Ank_5coord: 666..718
e-value: 2.7E-6
score: 27.5
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 286..548
coord: 33..290
coord: 600..721
coord: 750..913
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 779..874
e-value: 5.0E-7
score: 30.2
coord: 35..132
e-value: 2.2E-8
score: 34.6
coord: 604..664
e-value: 6.8E-10
score: 39.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 67..878
score: 62.473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4950contigL-elsbetiae_contig4950:309..7706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4950.12920.1mRNA_L-elsbetiae_contig4950.12920.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4950 292..7706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4950.12920.1 ID=prot_L-elsbetiae_contig4950.12920.1|Name=mRNA_L-elsbetiae_contig4950.12920.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1000bp
MKRRRSSSIDSDAAVAGGSKRSSRGDVGRELLLSLAKAAEDNKSEEIEAL
AAKDGPHVNLSAPFGDDGLTALHRATLAGSMAALRTLLKVGADTEVAEAA
GGRTALHFAALRSDAAAVKALVLAGAETELRDRDGRTPLHLSIIVPPSKP
SAPLYLLEVAGAAGSTPDAFGMTALDIAVRYGRSDVVRTMFREIGAAPLP
CPANGGLLYDAVRGGDAGIVGALVGAGWEAGVPPPRAQSSKSSRETAPAG
CGPAPPANTSAASSSSTSSAAAGSPASAAATPAGGGETLSPLMLAADSGQ
PDVVRAILRGPHRGFPNAADARGYTALHFAALRGSVSIAEALLGLAPAPG
SGSGGAGNDREENSGGAGGGSGGSGVGGGGDGDACGGGRPAKAAETAAAA
AAAAAAATKAEATFADPDVVNADGDTALHVAIATRRVGVGEALLRAGASV
RVANRLGFTALHFAAALGLSGLAGQLLERGADVAAVEGAASATAASPGSP
GVGGEEGGAGAVGGGVGGVAAAAAAAAAAAVATGARASPKPEQRTSSRLH
PSSSPKPSPATTNGGRRSSRSPSGGARKGGRKAGGGSGGGGSGGIAAKDR
RNNKREGRTPLHYAAMNGRVETARALLEAGAPAAHRWNGERESPLFAAAK
SGRAGVVELLLLHGLGPGDVDAPNSAGETPLSAACANGHADVVDQLLRGG
ADVSRRDPSSHQSALDIAVSVACPTSRARIVRTLLAAEAEQPDGADSDGD
IGGDSGGDSGGGRGGGGRHSTPLRAACRAVWGSGEFCAVRALLEGGADAD
AAPPPGGEGRRRLRPLHIAAVHGNAGALSALTLRGCRLDAKTRDPSRSTP
LVLAVQQGHTEAARVLIDAGAAIDAVPRGEDGSERAPSLARLAADMRRAD
LVSLLAKALLDRDSSEAWAAEWAAASAASAASAASAANDDGAGADASADA
GADAASADAASAAGAGAGAATAAGADAGADAAAAAGAGAGAGAGAGAGAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom