prot_L-elsbetiae_contig4944.12907.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4944.12907.1
Unique Nameprot_L-elsbetiae_contig4944.12907.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length72
Homology
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: D7G1F0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F0_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 8.670e-37
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 0
Query:    7 VESDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
            VESDDDLPFAC+ICRQGF DP+VTNCGHYFCE+CAQE YKTNPRCAACGKQTQGVFN AKKLTEKL
Sbjct:  284 VESDDDLPFACLICRQGFVDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKL 349          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A836CP80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP80_9STRA)

HSP 1 Score: 106 bits (265), Expect = 6.920e-26
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    7 VESDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
            V+ D DLPFAC ICR+ FRDPVVTNCGH+FCE CA + YK + RCAACGKQT GVFN A++L E +
Sbjct:  262 VDEDGDLPFACFICREAFRDPVVTNCGHHFCEACAMDNYKRSTRCAACGKQTGGVFNFARRLVEHM 327          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A6V1N7Z0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N7Z0_HETAK)

HSP 1 Score: 105 bits (261), Expect = 1.420e-25
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    7 VESDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
            ++SDD+LPFAC ICR+ F  PV T CGHYFCE+CA E YKT+ RCA CGKQT G+FN AKK+ E++
Sbjct:  213 IDSDDELPFACHICREDFEQPVATLCGHYFCEECALEHYKTDKRCAICGKQTSGIFNQAKKIVERM 278          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A8H7RE19_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RE19_9FUNG)

HSP 1 Score: 104 bits (259), Expect = 2.240e-25
Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    8 ESDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
            +SDD+LPFAC+ICR+ F++PVVT C HYFCE CA + YK +P+C ACGK TQGVFN AKK+ EKL
Sbjct:  218 DSDDELPFACLICREEFKNPVVTRCEHYFCEACAIKNYKKSPKCYACGKPTQGVFNTAKKMLEKL 282          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A0B7MVZ9_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7MVZ9_9FUNG)

HSP 1 Score: 100 bits (250), Expect = 5.920e-24
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    9 SDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
             DD+LPFAC+ICRQ F DPVVT CGHYFCE CA + Y+ +P+C ACG  TQGVFN AKK+  KL
Sbjct:  234 DDDELPFACLICRQEFTDPVVTRCGHYFCETCAIKNYQKSPKCFACGAPTQGVFNTAKKMLAKL 297          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A8H7R028_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7R028_9FUNG)

HSP 1 Score: 100 bits (250), Expect = 6.620e-24
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    9 SDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
             DD+LPFAC+ICRQ F DPVVT CGHYFCE CA + Y+ +P+C ACG  TQGVFN AKK+  KL
Sbjct:  241 DDDELPFACLICRQEFTDPVVTRCGHYFCETCAIKNYQKSPKCFACGAPTQGVFNTAKKMLAKL 304          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A2N3NEU2_9PEZI (Pre-mRNA-splicing factor CWC24 (Fragment) n=1 Tax=Lomentospora prolificans TaxID=41688 RepID=A0A2N3NEU2_9PEZI)

HSP 1 Score: 100 bits (248), Expect = 1.120e-23
Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 0
Query:   11 DDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKL 68
            DD+PFACVIC+Q ++ PVVT CGHYFCE CA ++Y+TNP CAACG  T GVFNVA+KL
Sbjct:  268 DDIPFACVICKQPYKSPVVTRCGHYFCESCALKRYRTNPNCAACGASTGGVFNVARKL 325          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A1C7NCT8_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NCT8_9FUNG)

HSP 1 Score: 99.4 bits (246), Expect = 1.930e-23
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    9 SDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
            SD++LPFAC+ICR+ F +PVVT C HYFCE CA + YK +P+C ACG  TQGVFN AKKL EKL
Sbjct:  224 SDEELPFACLICREEFTNPVVTRCEHYFCEACAIKNYKKSPKCFACGAPTQGVFNTAKKLLEKL 287          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A367KLW3_RHIST (Pre-mRNA-splicing factor CWC24 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KLW3_RHIST)

HSP 1 Score: 99.0 bits (245), Expect = 2.780e-23
Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    8 ESDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
            +SD++LPFAC+ICR+ F +PVVT C HYFCE CA   YK +P+C ACG  TQGVFN AKK+ EKL
Sbjct:  222 DSDEELPFACLICREEFVNPVVTRCNHYFCEACAIRNYKESPKCFACGAPTQGVFNTAKKILEKL 286          
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Match: A0A397U223_9GLOM (Pre-mRNA-splicing factor CWC24 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U223_9GLOM)

HSP 1 Score: 99.0 bits (245), Expect = 3.030e-23
Identity = 39/65 (60.00%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    8 ESDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPRCAACGKQTQGVFNVAKKLTEKL 72
            ESDD+LPFAC+ICRQ +++PVVT CGHYFCE+CA + +  +P+C ACG  T G+FN AK + +KL
Sbjct:  231 ESDDELPFACLICRQEYKNPVVTKCGHYFCEKCALQNFSKSPKCYACGAPTNGIFNTAKNILQKL 295          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4944.12907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1F0_ECTSI8.670e-3790.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CP80_9STRA6.920e-2668.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1N7Z0_HETAK1.420e-2565.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8H7RE19_9FUNG2.240e-2567.69Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor satur... [more]
A0A0B7MVZ9_9FUNG5.920e-2467.19Pre-mRNA-splicing factor CWC24 n=1 Tax=Parasitella... [more]
A0A8H7R028_9FUNG6.620e-2467.19Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor plumb... [more]
A0A2N3NEU2_9PEZI1.120e-2370.69Pre-mRNA-splicing factor CWC24 (Fragment) n=1 Tax=... [more]
A0A1C7NCT8_9FUNG1.930e-2367.19Pre-mRNA-splicing factor CWC24 n=1 Tax=Choanephora... [more]
A0A367KLW3_RHIST2.780e-2364.62Pre-mRNA-splicing factor CWC24 n=1 Tax=Rhizopus st... [more]
A0A397U223_9GLOM3.030e-2360.00Pre-mRNA-splicing factor CWC24 n=2 Tax=Gigaspora T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 17..54
e-value: 6.2E-7
score: 39.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 17..54
score: 10.896
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 16..59
e-value: 2.8E-10
score: 39.9
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 11..58
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 15..72
e-value: 9.9E-19
score: 68.7
IPR039971Pre-mRNA-splicing factor CWC24-likePANTHERPTHR12930ZINC FINGER PROTEIN 183coord: 8..72
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 32..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4944contigL-elsbetiae_contig4944:366..1280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4944.12907.1mRNA_L-elsbetiae_contig4944.12907.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4944 366..1280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4944.12907.1 ID=prot_L-elsbetiae_contig4944.12907.1|Name=mRNA_L-elsbetiae_contig4944.12907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp
GPVLRQVESDDDLPFACVICRQGFRDPVVTNCGHYFCEQCAQEQYKTNPR
CAACGKQTQGVFNVAKKLTEKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR039971CWC24-like
IPR017907Znf_RING_CS