prot_L-elsbetiae_contig4935.12895.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4935.12895.1
Unique Nameprot_L-elsbetiae_contig4935.12895.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length496
Homology
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: D7FWC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC8_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 6.770e-93
Identity = 230/488 (47.13%), Postives = 261/488 (53.48%), Query Frame = 0
Query:   26 ELPRLRAMYATIESQVESLEAAMDPRFG-GELAGAYGRRVYGSLGPMLRQAQAASSELAQGVQALSARGGVPRGDALERSSELVARIERACLAHQARCPPQELERRMSREPSFSVVTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGAVGGLGSTPSAWQXXXXXXXXRQISDASAASRPLTRTLTLDDVVNETAELE-TDRHXXXXXXXXXXXREQGVPEHGXXXXXA----ATPDTG-PGTA----------GARSGEVGDQDTADDSRNEPFEGQDLEELAGVDDVSSGGTGDGLTAAAAARNGGVRAYSFGRGDLGALLHSDDADHAAADGPVALKDHWSVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPDLPSEAFLPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGHSADATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLILTSKAE 496
            EL  L    +TIESQV SLE AMDPR    ELAGAYGR+ Y SLG ML QA+ A+SE+A+ VQA    GG         ++E+V                                                                           VGG                           RPLTRT TL+DV+NE  E E   R XXXXXXXXXXX  +G  + G          A  + G PG A          G R  E     TA  +            LA   +V +  T  G      A  GGV  +SFGRGDLGALLHSDDADH+A +GPV +K+H SVLQVSTSLFHTMAVTASG+ILGCGQNDEGQVRPDL +EAFLPRPSLVEPVL HR+TQVACGLYHT C TASG+ ++WGGNESGQLGHS + TR V P  VQV GAGQ+WSSRRRA RVACGDLFTLILTS+AE
Sbjct:   49 ELSDLIRTVSTIESQVGSLEEAMDPRGSLTELAGAYGRQGYESLGSMLGQARTATSEVAERVQA---SGG--------SAAEMV---------------------------------------------------------------------------VGG---------------------------RPLTRTATLEDVINEADEREEVHRXXXXXXXXXXXXXXRGFGDGGDDSAMREARPANDERGIPGVADGGGFGGDHPGGRHSETLSTMTAATATEGQGSDGGTVALASPMEVEASATSAGAPQDQVAGEGGVGVFSFGRGDLGALLHSDDADHSAKEGPVVVKNHRSVLQVSTSLFHTMAVTASGEILGCGQNDEGQVRPDLLTEAFLPRPSLVEPVLSHRITQVACGLYHTVCATASGMAMSWGGNESGQLGHSGEITRTVRPMVVQVTGAGQSWSSRRRASRVACGDLFTLILTSRAE 423          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: A0A6H5K2Y9_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y9_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 2.410e-84
Identity = 225/501 (44.91%), Postives = 265/501 (52.89%), Query Frame = 0
Query:   26 ELPRLRAMYATIESQVESLEAAMDPRFG-GELAGAYGRRVYGSLGPMLRQAQAASSELAQGVQALSARGGVPRG-DALERSSELVARIERACLAHQARCPPQELERRMSREPSFSVVTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGAVGGLGSTPSAWQXXXXXXXXRQISDAS----AASRPLTRTLTLDDVVNETAELE-TDRHXXXXXXXXXXXREQGVPEHGXXXXXAATPDTGP-----GTAGARSGEVGDQDTADDSRNEPFEGQDLEELAGVDDVSSGGTGDGLTAAA------------------AARNGGVRAYSFGRGDLGALLHSDDADHAAADGPVALKDHWSVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPDLPSEAFLPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGHSADATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLILTSKAE 496
            EL  L  M +TIESQV SLE AMDPR    ELAGAYGR+VY SLG ML QA+AA+SE+A+ VQ LS +  V    +  +RS  L+ RI+RA LAH ARCPPQELERR+SREPSFSV   +                                    P G+  GLG T             RQ S  S       RPLTRT+TL+DV+NE  E E   R  XXX         +G  + G     +A P+  P     GT G   GE    D  +   +E      L  +         G+  G  A+A                  AA  GGV  +SFGRGDLGALLH+DDADH+A +GPV +K+H S+LQVSTSLFHTMAVTASG+ILGCGQNDEGQVRPDL +EAFLPRPSLVEPVL HR+TQ                                         A ++   GQ+WSSRRRA RVACGDLFTLILTS+AE
Sbjct:   49 ELSDLIRMVSTIESQVGSLEEAMDPRGSLTELAGAYGRQVYESLGSMLGQARAATSEVAERVQTLSGQEDVEVPLEVRQRSDNLLERIKRAWLAHTARCPPQELERRLSREPSFSVPQPTPSSGSDPSSTAAVGAGTSPAGVPAVPTPSASPP---PAGSPAGLGHT-----------RRRQASGGSQEMVVGGRPLTRTVTLEDVINEADEREEVHRRQXXXRDAAESGGSRGFGDDGDD---SAMPEARPANDERGTRGVADGEAFGGDHPEGGHSET-----LATITAATATEGQGSDGGTVASASPMEXXXXXXXXXXXXXXAAGEGGVGVFSFGRGDLGALLHADDADHSAEEGPVVVKNHRSLLQVSTSLFHTMAVTASGEILGCGQNDEGQVRPDLLTEAFLPRPSLVEPVLSHRITQ-----------------------------------------ARRLERWGQSWSSRRRASRVACGDLFTLILTSRAE 486          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: A0A482SUS3_9ARCH (HECT domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUS3_9ARCH)

HSP 1 Score: 134 bits (338), Expect = 8.530e-30
Identity = 77/172 (44.77%), Postives = 111/172 (64.53%), Query Frame = 0
Query:  329 RAYSFGRGDLGALLHSDDADHAAADGPVALKD-HWSVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPDLPSEAFLPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGHSADATRMVHPKAVQVAGAGQAWSSRRRAV---RVACGDLFTLILTSKAE 496
            R  S+GR DLG L++ +D D    DG  +    + +++ V+++++HT AVT++G++  CGQND+GQV  D P E F  RP +V+ + +H+V  VACGL HT C+TA+G  +++G NESGQLGHSA     V PK V    A    +SRR A+   +VACGDLF+L L +  E
Sbjct:   69 RVLSWGRNDLGCLMYRNDED--IRDGIYSFSHTNRTIVSVASNVYHTAAVTSTGELYTCGQNDQGQVDADSPEEQF-ERPHVVDNIGNHKVISVACGLNHTVCVTAAGCAISYGSNESGQLGHSASKHTKVPPKVVNFTIA----ASRRAAMIITKVACGDLFSLFLLTSGE 233          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: A0A7S0SRU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRU5_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.140e-28
Identity = 70/171 (40.94%), Postives = 106/171 (61.99%), Query Frame = 0
Query:  332 SFGRGDLGALLHSDDADHAAADGPVALK--DHWSVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPDLPS----EAFLPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGHSADATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLILTSKAE 496
            S+GR D G L  SD+      DG  +LK   + +++ +S++ +H+ AVTA+G++  CG NDEGQ  P+  +    + F+P+P ++E +  HRV  V+CGLYHTAC+ A+G  +T+GGNE GQLGHS +    V PK V     G+       A +V+CGD+++L LT+  E
Sbjct:   65 SWGRNDSGTLFRSDEE---TIDGVQSLKFFGNRNIISISSNCYHSAAVTATGELYLCGSNDEGQSNPNRDNNGQLQPFIPKPRIIESLGQHRVCFVSCGLYHTACVIATGHAITFGGNEVGQLGHSPNQISQVAPKLVDFKWKGKG----NIAHKVSCGDMYSLFLTTSGE 228          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: W7TN24_9STRA (Ubiquitin protein ligase e3a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN24_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.460e-24
Identity = 67/134 (50.00%), Postives = 87/134 (64.93%), Query Frame = 0
Query:  363 SVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPDLPSEAFLPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGHSADATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLILTSKAE 496
            +V+ + ++L+HT+AVT +G++ G G N++GQV PD   E  L  P LVEP+L  RVT V+CG  HTACLTASG  +++G NE GQLGHSADA          V G G      R   +VACG LFTL+LTS+ E
Sbjct:  298 NVVNLCSTLYHTVAVTLTGEVYGAGVNEDGQVSPDR-QEPQLWTPVLVEPLLSQRVTMVSCGDNHTACLTASGAVVSFGNNEVGQLGHSADAASSQRVGPRTVVGLGS-----RMVKQVACGYLFTLLLTSQGE 425          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: A0A7S1U4V6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4V6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.060e-22
Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 0
Query:  331 YSFGRGDLGALLHSDDADHAA-ADGPVALKDHWSVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPD------LPSEAF--LPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGH----SADATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLIL 491
            +S+GRGDLGALL  D+  H A  + P++ K    ++    S++H   VTA+G++  CG NDEGQV  D      +  + F  +P P ++E +   R   VACGLYHT  L +SG  ++WGGNE GQLGH    +  A R V P+A++    G   S+   AV VA GD F+++L
Sbjct:  135 FSWGRGDLGALLWPDEEYHGADVESPLSRK---RIMTAGGSMYHAAGVTATGEVYACGSNDEGQVGVDDVSGVEVDRDGFRIVPAPVMIEALYTQRAVAVACGLYHTLVLCSSGKVVSWGGNEVGQLGHGPPQAGAARRRVRPRAME----GMPPSAA--AVAVAAGDEFSVVL 299          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: A0A7S1U6E2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6E2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.510e-22
Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 0
Query:  331 YSFGRGDLGALLHSDDADHAA-ADGPVALKDHWSVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPD------LPSEAF--LPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGH----SADATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLIL 491
            +S+GRGDLGALL  D+  H A  + P++ K    ++    S++H   VTA+G++  CG NDEGQV  D      +  + F  +P P ++E +   R   VACGLYHT  L +SG  ++WGGNE GQLGH    +  A R V P+A++    G   S+   AV VA GD F+++L
Sbjct:  135 FSWGRGDLGALLWPDEEYHGADVESPLSRK---RIMTAGGSMYHAAGVTATGEVYACGSNDEGQVGVDDVSGVEVDRDGFRIVPAPVMIEALYTQRAVAVACGLYHTLVLCSSGKVVSWGGNEVGQLGHGPPQAGAARRRVRPRAME----GMPPSAA--AVAVAAGDEFSVVL 299          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: A0A7S2XN65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN65_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.480e-19
Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = 0
Query:  363 SVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPDLPSEAFLPRPSLVEPVLHHRV--TQVACGLYHTACLTASGVCLTWGGNESGQLGHS-ADATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLILTSK 494
            +VL V+TS  HT   TA G++  CG N  G+V P    +  + RP+L+E ++  +V   QV+CGL+HTA LTA+G  LTWG N +GQLGH+   +T  V PK   V G G      RRA  VACGD FTL LT++
Sbjct:  296 AVLSVATSATHTACATAQGEVYMCGMNPFGEVDPSGRKDMVV-RPTLLESLMGQQVQVVQVSCGLHHTAALTANGSILTWGSNNNGQLGHTQGSSTSHVFPKGF-VMGRG------RRAAAVACGDSFTLCLTTR 422          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: A0A7S4QLP3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QLP3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.950e-15
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:  376 AVTASGDILGCGQNDEGQVRPDLPS---EAFLPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGH---SAD---ATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLILTSK 494
            AVTASG++L CG N +G+V P   S      +PRP+ +E +   RV Q++CG  HTA ++++G  LTWG N+ GQLG    S+D   +T    PKA+ V G G      RRA  V+CG+ FTL++T+K
Sbjct:    1 AVTASGEVLTCGTNLDGEVDPTKASGDKHEIIPRPTHLECLSMTRVIQISCGSDHTAAVSSAGTVLTWGSNDKGQLGQFIRSSDTPSSTSFQRPKAM-VLGPG------RRASYVSCGEKFTLVITTK 121          
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Match: A0A7S4QK45_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QK45_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.200e-14
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:  376 AVTASGDILGCGQNDEGQVRPDLPS---EAFLPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGH---SAD---ATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLILTSK 494
            AVTASG++L CG N +G+V P   S      +PRP+ +E +   RV Q++CG  HTA ++++G  LTWG N+ GQLG    S+D   +T    PKA+ V G G      RRA  V+CG+ FTL++T+K
Sbjct:    1 AVTASGEVLTCGTNLDGEVDPTKASGDKHEIIPRPTHLECLSMTRVIQISCGSDHTAAVSSAGTVLTWGSNDKGQLGQFIRSSDTPSSTSFQRPKAM-VLGPG------RRASYVSCGEKFTLVITTK 121          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4935.12895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWC8_ECTSI6.770e-9347.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2Y9_9PHAE2.410e-8444.91HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A482SUS3_9ARCH8.530e-3044.77HECT domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S0SRU5_9STRA2.140e-2840.94Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
W7TN24_9STRA3.460e-2450.00Ubiquitin protein ligase e3a n=2 Tax=Monodopsidace... [more]
A0A7S1U4V6_9STRA2.060e-2240.80Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U6E2_9STRA2.510e-2240.80Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2XN65_9STRA4.480e-1946.67Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4QLP3_9STRA5.950e-1543.75Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4QK45_9STRA1.200e-1443.75Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..47
NoneNo IPR availablePFAMPF13540RCC1_2coord: 364..393
e-value: 4.7E-7
score: 29.4
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 177..493
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 177..493
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 271..496
e-value: 8.7E-32
score: 112.4
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 304..494
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 435..491
e-value: 1.1E-7
score: 32.4
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 421..431
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 328..380
score: 9.137
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 381..434
score: 10.685
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 435..494
score: 12.655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4935contigL-elsbetiae_contig4935:1654..10625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4935.12895.1mRNA_L-elsbetiae_contig4935.12895.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4935 1654..10625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4935.12895.1 ID=prot_L-elsbetiae_contig4935.12895.1|Name=mRNA_L-elsbetiae_contig4935.12895.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=496bp
MTAGLQTAIGAGAAEAGEEAGEEAAELPRLRAMYATIESQVESLEAAMDP
RFGGELAGAYGRRVYGSLGPMLRQAQAASSELAQGVQALSARGGVPRGDA
LERSSELVARIERACLAHQARCPPQELERRMSREPSFSVVTSSSSSSSAA
APTPGDTATATADAAAAAAADNATASSSSPGGAVGGLGSTPSAWQQQQQQ
RHHRQISDASAASRPLTRTLTLDDVVNETAELETDRHHHHHHQRQGQGRE
QGVPEHGGGGGGAATPDTGPGTAGARSGEVGDQDTADDSRNEPFEGQDLE
ELAGVDDVSSGGTGDGLTAAAAARNGGVRAYSFGRGDLGALLHSDDADHA
AADGPVALKDHWSVLQVSTSLFHTMAVTASGDILGCGQNDEGQVRPDLPS
EAFLPRPSLVEPVLHHRVTQVACGLYHTACLTASGVCLTWGGNESGQLGH
SADATRMVHPKAVQVAGAGQAWSSRRRAVRVACGDLFTLILTSKAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens