prot_L-elsbetiae_contig491.12853.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig491.12853.1
Unique Name	prot_L-elsbetiae_contig491.12853.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	600

Homology

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BLAST of mRNA_L-elsbetiae_contig491.12853.1 vs. uniprot
Match: D7G7U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U6_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 6.990e-163
Identity = 342/617 (55.43%), Postives = 404/617 (65.48%), Query Frame = 0

Query:   13 IQDETSHELSSFDILGRLPPFPAT----------------PRGSLR-----EGMAPGTGRSTESGLEHALERASCDSDEELEVIRGSVRSLRAQRAAVEKLKAKARKEEGAAKALRRKLGEAEHRIQELRAQGGRDVVRRLMDEVTELRARLKATSTAFQTREKSVAELRGAVQHLRLDLRTGQEKTRAQARKLEEQGRESXXXRVTIRXXXXXXXXXXXXXXXXXXSAEDKCAASGRELASLSALLREANAALGASKGTMQAALAKQARKLEAVRKDKESLMSHKGQAKERLQELTSLCDRQRSKLAEATIRASGLERAASAAKEDTRLAEDQTARLRAELSEVDRSRREEDAGATIKLRTAARQAEELKAELASVKSEAAEKARQLIRHRDEMSRFRQDVNTLREATAQQGDIRQALRDRDETIKDLRQRLELERRERGQWGQARKQLLMEFCEEENKLRSTLQPVQQQRPQXXXXXXXXXXXRRHAAEQQQRRPVVDLDQAPPARSEQHPVENTP-SRHSTMYSVHSAATNGEAGDSGAEGRFRSGSRVARGQEEKGGEGSGDDSLFDFTRRTRAAVGIVGTDAFGVGDVGGHE--------ASDEFIMRPGQQ 599
            +++  S +  SFD+LG LP  P T                P+         EG+A GTG STESGLE   ER S DSD+ELE IRGSVRSLRAQRAAVEKLK KAR                       RAQGGRDVVRRLMDEVTELRARLKATSTAFQTRE SVA+LR AVQ L LDLR GQEK RAQ+RKLE+Q                                   CAASGRELASLSALLREANA L ASKG+MQA +AKQA KLEA RK+KESL+  KGQ +ER++ELTS+C+RQRSKLA+A  RA  LER ASAAK++TRLA++Q A+L+ ELS  D+ RREEDAGATIKLRTAARQ EEL++E+  VKSEAAEKARQL+RHRDEMS FR+DV+ LREA  QQGD+RQA+RDRDETI+DLR++LELERRERGQWGQARKQLL+EFCEEENKLRSTLQP Q Q P+               + ++Q R    L+ APP  S++    + P SRH+T+ ++    TNG++  S A    R  + VAR +E+  G+    + L D      A  G+   D  G G +GG+E        ASDEF MRPGQQ
Sbjct:    1 MENTNSSQDLSFDVLGVLPTVPTTTPLEPSLIGSHTRTGRPQSHHSYALGGEGIASGTGGSTESGLEQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKARLXXXXXXXXXXXXXXXXXXXXXXRAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVADLREAVQTLTLDLRAGQEKARAQSRKLEQQ-----------------------------------CAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARKEKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSAADKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQHQEPR---------------STRRQGRKQAILEHAPPTGSDRRLTRHKPLSRHATIRNIR---TNGDSRRSSANSSLRGEACVAREEEKVFGDSEAGEVLLDL-----AGGGV--RDG-GTGTLGGYEEGNSSRTMASDEFEMRPGQQ 556

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig491.12853.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig491.12853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G7U6_ECTSI	6.990e-163	55.43	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 410..430
None	No IPR available	COILS	Coil	Coil	coord: 351..399
None	No IPR available	COILS	Coil	Coil	coord: 129..149
None	No IPR available	COILS	Coil	Coil	coord: 175..219
None	No IPR available	COILS	Coil	Coil	coord: 79..123
None	No IPR available	COILS	Coil	Coil	coord: 277..318
None	No IPR available	PANTHER	PTHR23157	FAMILY NOT NAMED	coord: 55..518

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig491	contig	L-elsbetiae_contig491:25745..30994 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig491.12853.1	mRNA_L-elsbetiae_contig491.12853.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig491 25625..31057 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig491.12853.1 ID=prot_L-elsbetiae_contig491.12853.1|Name=mRNA_L-elsbetiae_contig491.12853.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=600bp
MSTGSWATGHQRIQDETSHELSSFDILGRLPPFPATPRGSLREGMAPGTG
RSTESGLEHALERASCDSDEELEVIRGSVRSLRAQRAAVEKLKAKARKEE
GAAKALRRKLGEAEHRIQELRAQGGRDVVRRLMDEVTELRARLKATSTAF
QTREKSVAELRGAVQHLRLDLRTGQEKTRAQARKLEEQGRESQEQRVTIR
RLEEECARCEERAQRAEKSAEDKCAASGRELASLSALLREANAALGASKG
TMQAALAKQARKLEAVRKDKESLMSHKGQAKERLQELTSLCDRQRSKLAE
ATIRASGLERAASAAKEDTRLAEDQTARLRAELSEVDRSRREEDAGATIK
LRTAARQAEELKAELASVKSEAAEKARQLIRHRDEMSRFRQDVNTLREAT
AQQGDIRQALRDRDETIKDLRQRLELERRERGQWGQARKQLLMEFCEEEN
KLRSTLQPVQQQRPQPQEQQQRRTRPRRHAAEQQQRRPVVDLDQAPPARS
EQHPVENTPSRHSTMYSVHSAATNGEAGDSGAEGRFRSGSRVARGQEEKG
GEGSGDDSLFDFTRRTRAAVGIVGTDAFGVGDVGGHEASDEFIMRPGQQ*