prot_L-elsbetiae_contig4906.12842.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4906.12842.1
Unique Nameprot_L-elsbetiae_contig4906.12842.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length107
Homology
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BLAST of mRNA_L-elsbetiae_contig4906.12842.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 9.220e-27
Identity = 56/115 (48.70%), Postives = 71/115 (61.74%), Query Frame = 0 
Query:    1 MCDCGVDGVSSDAVDWVSFNREAFESEFDRVNGKMSNGGGGAGAK---------GGVSRAIDGCECAKREGSLSCARLVACPVVTRRILKVPEPVCTACEDDDDFLGGDLFNLFS 106
            MC+C +  + S+AVDWV+FN EAFE E  R+  ++    G    K         GG+ R +DGCEC       SC+RLVACP+VTRRIL+VPEPVC  CED     G DLF+LF+
Sbjct: 1073 MCECDMGAILSNAVDWVAFNGEAFEEELQRMEARLRLSPGTMAGKNVKDEGCSGGGMGRILDGCECNLESSVSSCSRLVACPIVTRRILRVPEPVCPECEDGSGVFGTDLFDLFA 1187
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BLAST of mRNA_L-elsbetiae_contig4906.12842.1 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.100e-25
Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 0 
Query:    1 MCDCGVDGVSSDAVDWVSFNREAFESEFDRVNGKMS---------NGGGGAGAKGGVSRAIDGCECAKREGSLSCARLVACPVVTRRILKVPEPVCTACEDDDDFLGGDLFNLFS 106
            MC+C ++ + S+AVDWV+FN EAFE E  R+  ++          +G     ++GG+ R +D CEC       SC+RLVACP+VTRRIL+VP+PVC  CED     G DLF+LF+
Sbjct:  829 MCECDMEAILSNAVDWVAFNGEAFEEELQRMEARLKLPPGTMAGKDGKNEGCSEGGMGRILDRCECKLERSVSSCSRLVACPIVTRRILRVPKPVCPECEDGSGVFGTDLFDLFA 943
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4906.12842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6K5_ECTSI9.220e-2748.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JAV0_9PHAE1.100e-2546.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4906contigL-elsbetiae_contig4906:11045..11365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4906.12842.1mRNA_L-elsbetiae_contig4906.12842.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4906 10949..11533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4906.12842.1 ID=prot_L-elsbetiae_contig4906.12842.1|Name=mRNA_L-elsbetiae_contig4906.12842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
MCDCGVDGVSSDAVDWVSFNREAFESEFDRVNGKMSNGGGGAGAKGGVSR
AIDGCECAKREGSLSCARLVACPVVTRRILKVPEPVCTACEDDDDFLGGD
LFNLFS*
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