prot_L-elsbetiae_contig4905.12837.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4905.12837.1
Unique Nameprot_L-elsbetiae_contig4905.12837.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length379
Homology
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BLAST of mRNA_L-elsbetiae_contig4905.12837.1 vs. uniprot
Match: D8LDX3_ECTSI (Exocyst subunit Exo70 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX3_ECTSI)

HSP 1 Score: 526 bits (1355), Expect = 1.530e-178
Identity = 303/387 (78.29%), Postives = 320/387 (82.69%), Query Frame = 0 
Query:    1 MENINECFLLEKELRGVVQKGMRGNVGAVEYLEEMRRINDAIVYFRKWPSLKSQKDAIRGLEELSSMAAKECIDEFNRLMRTVGPAVQFQASITQTNTFESVNTLSDNVAQSLAAIGECLTLLKHNRQLRQNYTASRRVAVKTALDKWESKFESTPKGQQARGGGPWLRFYVDFSTKLVAAERLLWERALKASDSSSFSSGGDHGDGEEGSGGM---EAEAAFVMVVTPVIEKLVREVDRKLQSSLAEMRDRSKDDGGVGGAAGSXXXXXXXAG-----SSQIRARARPTSSSHVAMKDGDIPADVVVSLMEMSDALHKGSYSLQDILKVGGDEPSSKGDRDARGAQGXXXXXXXXXXXXXDAERGQGGRATDTLAAVQRRLSRVCM 379
            ME+INECFLLEKELRGVVQKGMRGNVGAVEYLEEMRRI+DAI YFRKWPSLKSQK+AI+GLEELSSMAAKECIDEFNRLMRTVGPAVQFQ   TQTNTFESVNTLSDNVAQSLAAIGECLTLL+H+ QLRQNYTA+RRVAVKTALDKWESKFE TPKGQQARGGGPWLRFYVDFSTKLV AERLLWERALKASDSSS   GGD G    G+G     EAEAAFVMVV PVIEKLVREVDRKLQSSLAE+RDRS    G  GA   XXXXXXX       SSQIRAR RP SS+  A+KDGDIPAD+VV+LMEMSDALHKGSYSLQDILKVGGD+  SKGD   RG Q               A RG+  +ATD LAAVQRRLSR C+
Sbjct:   76 MESINECFLLEKELRGVVQKGMRGNVGAVEYLEEMRRIDDAIAYFRKWPSLKSQKEAIKGLEELSSMAAKECIDEFNRLMRTVGPAVQFQ---TQTNTFESVNTLSDNVAQSLAAIGECLTLLRHSGQLRQNYTAARRVAVKTALDKWESKFEITPKGQQARGGGPWLRFYVDFSTKLVTAERLLWERALKASDSSSSKGGGDAGKDGRGAGSRSLEEAEAAFVMVVNPVIEKLVREVDRKLQSSLAEVRDRSGKKEGATGAGXXXXXXXXXXXXXXXXSSQIRARTRPVSSTQAAVKDGDIPADIVVALMEMSDALHKGSYSLQDILKVGGDDSGSKGDD--RGYQSRRGSVVYASPDSA-ARRGRTNKATDALAAVQRRLSRACL 456
[Close]
BLAST of mRNA_L-elsbetiae_contig4905.12837.1 vs. uniprot
Match: A0A835YN31_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN31_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.140e-44
Identity = 125/338 (36.98%), Postives = 177/338 (52.37%), Query Frame = 0 
Query:    1 MENINECFLLEKELRGVVQKGMRGNVGA--VEYLEEMRRINDAIVYFRKWPSLKSQKDAIRGLEELSSMAAKECIDEFNRLMRTVGPAVQFQASITQTNTFESVNTLSDNVAQSLAAIGECLTLLKHNRQLRQNYTASRRVAVKTALDKWESKFESTP----KGQQARG------GGPWLRFYVDFSTKLVAAERLLWERALKASDSSSFSSGGDHGDGEEGSGGMEAEAAFVMVVTPVIEKLVREVDRKLQSSLAEMRDRSKDDGGVGGAAGSXXXXXXXAGSSQIRARARPTSSSHVAMKDGDIPADVVVSLMEMSDALHKGSYSLQDILKVGGDE 326
            ME +NE F LE E R  + +G+RG   A   EY +++RR+ +A+ +FR  PSL+SQ  A+ GL  L + AA EC++E+ RLMR VGP+VQF A+    + +E V  LS+  A  LAA+   L LL+    LRQ Y ++RRV V   L  W  KFE  P    +G  A        G   L  Y+DF+ KLVA ERLLWE+AL  +          H D       + AE AF+ VV+ V++KLVR+VD  +Q +L E++      G +GGA+                 RAR                  +V L+E+ D L++G+  L  +L++GG E
Sbjct:   43 MEKVNEYFTLEAEKRDAIARGVRGGGPARLAEYADDVRRVLEAMAFFRALPSLRSQGTALSGLTALCNTAAAECLEEYGRLMRAVGPSVQFNAAA---DAYEPVAPLSEAGAAGLAAVQGALELLEKRSALRQAYASARRVTVAATLRAWSEKFEPAPAVAGRGAPAADKSMVVMGAARLSAYLDFAVKLVAGERLLWEQALAVNPLR-------HRD-------IAAEEAFLTVVSSVVDKLVRDVDVGVQDALQELKSAQ---GEIGGAS-----------------RARRVEG--------------MVLLLEVGDTLNRGTALLLRVLRMGGAE 329
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4905.12837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDX3_ECTSI1.530e-17878.29Exocyst subunit Exo70 family protein n=2 Tax=Ectoc... [more]
A0A835YN31_9STRA1.140e-4436.98Exocyst subunit Exo70 family protein n=1 Tax=Tribo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.170coord: 1..248
e-value: 3.1E-13
score: 51.2
IPR016159Cullin repeat-like-containing domain superfamilySUPERFAMILY74788Cullin repeat-likecoord: 25..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4905contigL-elsbetiae_contig4905:128..12378 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4905.12837.1mRNA_L-elsbetiae_contig4905.12837.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4905 125..12378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4905.12837.1 ID=prot_L-elsbetiae_contig4905.12837.1|Name=mRNA_L-elsbetiae_contig4905.12837.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=379bp
MENINECFLLEKELRGVVQKGMRGNVGAVEYLEEMRRINDAIVYFRKWPS
LKSQKDAIRGLEELSSMAAKECIDEFNRLMRTVGPAVQFQASITQTNTFE
SVNTLSDNVAQSLAAIGECLTLLKHNRQLRQNYTASRRVAVKTALDKWES
KFESTPKGQQARGGGPWLRFYVDFSTKLVAAERLLWERALKASDSSSFSS
GGDHGDGEEGSGGMEAEAAFVMVVTPVIEKLVREVDRKLQSSLAEMRDRS
KDDGGVGGAAGSGAASSGGAGSSQIRARARPTSSSHVAMKDGDIPADVVV
SLMEMSDALHKGSYSLQDILKVGGDEPSSKGDRDARGAQGERRGSAGERG
GDADAERGQGGRATDTLAAVQRRLSRVCM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016159Cullin_repeat-like_dom_sf