prot_L-elsbetiae_contig490.12832.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig490.12832.1
Unique Nameprot_L-elsbetiae_contig490.12832.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length114
Homology
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BLAST of mRNA_L-elsbetiae_contig490.12832.1 vs. uniprot
Match: D7FGU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGU5_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 3.200e-30
Identity = 56/87 (64.37%), Postives = 70/87 (80.46%), Query Frame = 0 
Query:   27 ITQQGVLQGEAARFQVLAETDPGAERQLQATNAQLRAVTQRINNFDDQKSAELLEEHEAQLRGRKQVCCFMTLLFSGLLGVAIWALS 113
            +TQ GVLQGEAARFQ LAETDP A  QLQA NAQL+A++QRI N+D++K+ EL EE EAQ RGR Q+C FM L+  GL+ +A+WAL+
Sbjct:    1 MTQHGVLQGEAARFQALAETDPEAAVQLQAINAQLKALSQRIRNYDEEKADELEEEQEAQSRGRTQLCFFMALVAVGLVAIAVWALT 87
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig490.12832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGU5_ECTSI3.200e-3064.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..113
NoneNo IPR availableTMHMMTMhelixcoord: 93..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig490contigL-elsbetiae_contig490:20773..26750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig490.12832.1mRNA_L-elsbetiae_contig490.12832.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig490 18478..26809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig490.12832.1 ID=prot_L-elsbetiae_contig490.12832.1|Name=mRNA_L-elsbetiae_contig490.12832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=114bp
MQHHNMERGQGVTDLPDSTQNPRAYWITQQGVLQGEAARFQVLAETDPGA
ERQLQATNAQLRAVTQRINNFDDQKSAELLEEHEAQLRGRKQVCCFMTLL
FSGLLGVAIWALS*
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