prot_L-elsbetiae_contig49.12827.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig49.12827.1
Unique Nameprot_L-elsbetiae_contig49.12827.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length229
Homology
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 6.280e-141
Identity = 196/214 (91.59%), Postives = 206/214 (96.26%), Query Frame = 0
Query:    8 GSAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAESE 221
            GS AAP QSGVRSMQT+HRTTLMLRAKVVVVGDACVGKT+VVQMFKSGGHDYPKNYIMTIGVDFGVKQVK+PETD VVELFLFDCPGQGVFNKLEQGAAYYENAAFVC+VFDVSNRDSFESCGRWLQGVRAALP  SAPLPGV+IANK+DLREGGINARAVVETKEG+LFA QNGL+YFETS+AGAKGIDAPFHHMAT FH+TYEKTIEGAE E
Sbjct:   10 GSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHETYEKTIEGAEGE 223          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 3.290e-104
Identity = 152/165 (92.12%), Postives = 160/165 (96.97%), Query Frame = 0
Query:    8 GSAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETK 172
            GS AAP QSGVRSMQT+HRTTLMLRAKVVVVGDACVGKT+VVQMFKSGGHDYPKNYIMTIGVDFGVKQVK+PETD VVELFLFDCPGQGVFNKLEQGAAYYENAAFVC+VFDVSNRDSFESCGRWLQGVRAALP+ SAPLPGV+IANK+DLREGGINARAVV T+
Sbjct:   10 GSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTE 174          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.370e-85
Identity = 123/207 (59.42%), Postives = 165/207 (79.71%), Query Frame = 0
Query:   14 FQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAES 220
            F+S +RSM+++H+  LMLR KVV+VGDACVGK+A+VQMF  GG  YPKNY+MT GV F VKQV IP+T+  VEL+LFDC GQ +FN+ EQ    +EN ++V +V+DV NRDSF+SC +WLQGVR+     S+ +PGVL+ANK+DLREGGIN+RA V  +EG+ FA++N LE+FETS+A AK +DAPF+ +A+ FHQ YE+T++ AE+
Sbjct:   25 FKSALRSMESAHKPLLMLRCKVVLVGDACVGKSALVQMFHGGGQRYPKNYVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQNLKSWENTSYVVVVYDVGNRDSFQSCAKWLQGVRST--RQSSMIPGVLVANKSDLREGGINSRAAVSDEEGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQKYEQTVQRAEA 229          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.650e-84
Identity = 124/199 (62.31%), Postives = 156/199 (78.39%), Query Frame = 0
Query:   21 MQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAE 219
            M+  H+  LMLR+KVV+VGDA VGKTA+ QM  S GH+YPKNY+MT  VDF VKQ+++PE +  VELFLFDC GQGVFNKL+  A +++NA+FVC+VFDV NR+SF+SCGRWLQGVRA  P A AP+PGVLI +KADLREG   +RAVV+ +EG  FA++NGL YFE S+A + G++APF HMA  FH  YE ++  AE
Sbjct:    1 MEAQHKPLLMLRSKVVIVGDAYVGKTAITQMLISSGHNYPKNYLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDLNAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPTA-APMPGVLIGSKADLREG---SRAVVDAQEGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFHTMYEASMRKAE 195          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.200e-74
Identity = 121/211 (57.35%), Postives = 152/211 (72.04%), Query Frame = 0
Query:    9 SAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAE 219
            S+A  +QS VRSM++ HR+ LMLR KVVVVGDA VGK+A++ MF SGG  +PK Y+MT  VDF VKQV IPE+ + VEL+LFDC GQ +FN++E   A+YENA+F+CLV+DVSN  SFESCG+WLQ V  + P+    LPGVLIANK DL  GG   R VV T++GQ FA  N L YFETS+   +  D PF H+A +F + YE TI  A+
Sbjct:    6 SSAVEYQSAVRSMESGHRSILMLRCKVVVVGDAAVGKSALISMFHSGGSSFPKQYLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANNAHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQKGQEFASANNLAYFETSALEGE-FDEPFRHIAIEFAKKYEDTIAHAQ 209          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA)

HSP 1 Score: 229 bits (585), Expect = 4.790e-73
Identity = 105/203 (51.72%), Postives = 153/203 (75.37%), Query Frame = 0
Query:   14 FQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIE 216
             QSG+RSM+TSH+T ++LR K+++VGDACVGKTA+ Q F SGG  YPKNY+MTIG +F VKQV IPET+ +VELF++DC GQ +FN+L+  + YYENA+ V +V++V+NRDS  SC +W+ GV+A +  +  PL G  + NK + R+G I++RA V+  E +  A+  G+ YFETS+A   G+DAPF ++A +F++ YE+T++
Sbjct:    1 MQSGLRSMETSHKTMVILRCKLILVGDACVGKTALTQSFVSGGTTYPKNYLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDLNSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKA-IQNSGVPLVGAFVGNKCEFRDGSIDSRAEVDILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYRRYEETVQ 202          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A7S0SQ35_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ35_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.560e-69
Identity = 101/204 (49.51%), Postives = 153/204 (75.00%), Query Frame = 0
Query:   16 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAE 219
            SG+RSM + H++  +LR K+V++GD+CVGK++++Q+F+SGG  YPKNY+MTIG DF VKQV IP+T+ VVEL++FDC GQ +FN+LE  + YYENAA V +V+D+ N+++ +S  +WL G+++A+   S  L GVL+ NK+D R+G +++RA V  ++ Q F+K  GL YFE S+A   G+  PF H+AT+F++ YE T+  A+
Sbjct:   14 SGIRSMDSKHKSLTVLRCKLVIIGDSCVGKSSLLQVFQSGGTTYPKNYMMTIGADFNVKQVPIPDTNIVVELYIFDCAGQPIFNQLEMNSKYYENAAAVMVVYDIGNQETLQSTTKWLTGLKSAVSNPS-DLIGVLVGNKSDYRDGSVDSRAEVVKEDAQRFSKDLGLAYFEASAASNIGVTEPFLHVATEFYKKYEDTLRKAD 216          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A8J2SZ95_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ95_9STRA)

HSP 1 Score: 217 bits (553), Expect = 5.540e-68
Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 0
Query:   13 PFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAE 219
            P +S +RSM+T+HRT LMLR KVVVVGDA VGK+A++ MF SGG  YPK Y+MT  VDF VKQV IP+T + VEL+LFDC G  VFN++E+ A+ Y+ A F+ +V+DV+  DSF SC +W+QGVR         LPGVL+ANK DL E     R VV+ + G+ FAK+NGL YFETS+      + PF H+A +F + YE+T+  AE
Sbjct:   24 PMESCLRSMETTHRTILMLRCKVVVVGDATVGKSALISMFHSGGASYPKQYVMTSWVDFRVKQVDIPDTSTAVELYLFDCAGDPVFNQVEENASQYDQAGFLFVVYDVTKEDSFASCAKWIQGVRKGREDR---LPGVLVANKIDLEE-----RRVVDEQRGRDFAKENGLVYFETSALQGN-YEGPFRHVAMEFAKKYEETVARAE 221          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A067BYM3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYM3_SAPPC)

HSP 1 Score: 213 bits (543), Expect = 9.230e-67
Identity = 108/205 (52.68%), Postives = 146/205 (71.22%), Query Frame = 0
Query:   16 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAES 220
            SG+RSM+T+H +T++LR K VVVGDA +GKTA++Q  KS GHDYPKNYIMT   +  VK + IPET+++VEL+L DCPGQ +FN+ E G+ ++E A  + LVFDV++++SF+SC +W Q V  A PA +  + GVLI NKAD +EG    R  + TKE + FA+QN L+YFE S+     IDAPF HMAT F + Y+   E AE+
Sbjct:    2 SGLRSMETTHTSTVVLRCKAVVVGDAGIGKTALLQTLKSSGHDYPKNYIMTSSPELIVKSLPIPETNAIVELYLLDCPGQSIFNQREFGSMHFEGACMIVLVFDVNSKESFKSCIKWYQEV--ANPAPNHQISGVLIGNKADEKEGN---RDAISTKEAEDFAEQNNLKYFECSARLGTNIDAPFLHMATTFKKKYDDLAERAEN 201          
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A0N7L680_PLAHL (Intraflagellar transport protein 27 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L680_PLAHL)

HSP 1 Score: 213 bits (542), Expect = 1.190e-66
Identity = 101/203 (49.75%), Postives = 147/203 (72.41%), Query Frame = 0
Query:   16 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGA 218
            SG+RSM+T+H++T +LR KV +VG+A VGKTAVVQ+ KS GH++PKNY+MT  V+   K + IP+T+ VVEL+LFDC GQ +FN+L+ G  +Y+ A+   +VFDV+N++SF+SC +W Q VR A P  +  +PGVL+ANK DLR    N R  + TKE + FAK+N +++FE S+    G++APF ++A  FH+ Y+ T + A
Sbjct:    2 SGLRSMETTHKSTTVLRCKVAIVGEATVGKTAVVQILKSNGHEFPKNYVMTSDVELSTKSISIPDTNVVVELYLFDCAGQSIFNQLDFGTVHYKGASIALVVFDVNNKESFKSCSKWYQDVRDASPNHN--IPGVLLANKTDLR---YNNRDAISTKEAEEFAKRNDMKFFECSAQQNAGVEAPFVYIADWFHKKYQATTQRA 199          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ1_ECTSI6.280e-14191.59IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZL0_9PHAE3.290e-10492.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XVJ0_9STRA1.370e-8559.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZCC9_9STRA1.650e-8462.31IFT27, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S3JRK5_9STRA2.200e-7457.35Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3M1Q0_9STRA4.790e-7351.72Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0SQ35_9STRA2.560e-6949.51Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8J2SZ95_9STRA5.540e-6853.62Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A067BYM3_SAPPC9.230e-6752.68Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A0N7L680_PLAHL1.190e-6649.75Intraflagellar transport protein 27 homolog n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 145..158
score: 39.8
coord: 185..207
score: 24.24
coord: 58..74
score: 30.59
coord: 78..100
score: 23.68
coord: 33..54
score: 38.48
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 33..210
e-value: 4.1E-21
score: 86.1
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 35..211
e-value: 2.0E-6
score: -35.6
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 30..210
e-value: 1.9E-7
score: -5.3
NoneNo IPR availableGENE3D3.40.50.300coord: 16..222
e-value: 6.4E-47
score: 161.3
NoneNo IPR availablePANTHERPTHR24070:SF414GTP-BINDING PROTEIN RAY-LIKE ISOFORM 2-RELATEDcoord: 30..217
NoneNo IPR availablePROSITEPS51419RABcoord: 22..228
score: 20.075
IPR001806Small GTPasePFAMPF00071Rascoord: 34..206
e-value: 9.1E-35
score: 119.6
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 32..200
e-value: 6.7E-13
score: 46.7
IPR020849Small GTPase superfamily, Ras-typePANTHERPTHR24070FAMILY NOT NAMEDcoord: 30..217
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 33..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig49contigL-elsbetiae_contig49:11010..13573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig49.12827.1mRNA_L-elsbetiae_contig49.12827.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig49 10817..13788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig49.12827.1 ID=prot_L-elsbetiae_contig49.12827.1|Name=mRNA_L-elsbetiae_contig49.12827.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
MSRVMAPGSAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQ
MFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNK
LEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGV
LIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPF
HHMATDFHQTYEKTIEGAESESLRLSLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras-type
IPR027417P-loop_NTPase