prot_L-elsbetiae_contig49.12826.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig49.12826.1
Unique Nameprot_L-elsbetiae_contig49.12826.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length463
Homology
BLAST of mRNA_L-elsbetiae_contig49.12826.1 vs. uniprot
Match: D7FJQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ2_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 5.410e-160
Identity = 272/482 (56.43%), Postives = 309/482 (64.11%), Query Frame = 0
Query:    1 MKDVSDSIDQSKQLRGRELYSKEVDSELTLAGASAQRLSLHVNAWTTPQLSQELERIWLQVVRAVAKVDLQFQHLVNEWQKSCEALEELMSTSHAASIDAEAEQDAVGTKIRDCQLRAGIEPKAEKAGWWKQRQRCFLWDELWHIERKVAPLASPSRLAARYNLLLARCAEAGAWTTAVSVYRSTRSRGVVPRDTPKKREVGGPFSLEPFVYQHLLRAAKNASPPQPRAAMLVLREMRLRGEEPAAPHYNLVVCAXXXXXXXXXXXSTLKPLEE------VARC---------AADGENKTRGGTSIAPPEDTTRNGGIDTVGSVPLVAE-----RTVLGTSTPLKESPAAECADDENLTDGGKKSLCLLSAGSKAVEFRRAEHAEGAWRLALEVIADMRSRGVAPTEVTFRTLVECCRCAAAAPSPKLTSDGKERHGSRPADVYAALKEAGVPLRFCYQAGLGNALKGGRRFPEYVAELSR 462
            MKD SD ID  KQL GRE  SK V+ EL LA A+A+RLSLHVNAWTT +L QELERIWLQ VRA A +D QF+H+V EW+ +C AL  L  T+   SI  +AE+ A  T+IRDCQ+RAG+  KAEKAGWWKQRQ  FL +EL HIERKVAPLA PS LAARYNLLL RCAE G W TAVS YRS R+RGV+ +    +R+  G FSLEP VYQHLLRAAKNA+PPQPRAA+LVLREMRLRGEEPAA HYNLVV A           S L PL+          C          ADG  K  G       E  +  G + T    P  A+        +  +  LK +      D E+L D      CLL     AVE R AE A   WRLAL+VIADMR RGV PT VTF+TLVECCRCAAAA    +        GS PA+VY ALKEAG+P RFCYQAGL NAL GGR FP YVAE+SR
Sbjct:    1 MKDASDGIDNFKQLSGREKTSKAVEQELALAAAAARRLSLHVNAWTTAELLQELERIWLQAVRAEATIDSQFRHVVTEWEAACAALSRLSRTAQEDSIAGQAERHASATRIRDCQIRAGVGSKAEKAGWWKQRQMRFLREELRHIERKVAPLADPSHLAARYNLLLVRCAEVGGWATAVSAYRSARARGVITKPLSNRRDAVGSFSLEPLVYQHLLRAAKNATPPQPRAALLVLREMRLRGEEPAATHYNLVVSACARAAAVAASTSALMPLDRDDTEGHAVLCEDRLYQGIGGADGHKK-EGNCGAIHLESDSSGGVVATENETPKPAKLCSGHEEGVEENMRLKGTAFGAKVDVEDLPDR----CCLLPTAGDAVECRGAEAAGETWRLALDVIADMRKRGVTPTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVYTALKEAGIPARFCYQAGLRNALNGGRCFPGYVAEISR 477          
BLAST of mRNA_L-elsbetiae_contig49.12826.1 vs. uniprot
Match: A0A6H5L7G8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G8_9PHAE)

HSP 1 Score: 456 bits (1174), Expect = 1.040e-154
Identity = 262/481 (54.47%), Postives = 310/481 (64.45%), Query Frame = 0
Query:    1 MKDVSDSIDQSKQLRGRELYSKEVDSELTLAGASAQRLSLHVNAWTTPQLSQELERIWLQVVRAVAKVDLQFQHLVNEWQKSCEALEELMSTSHAASIDAEAEQDAVGTKIRDCQLRAGIEPKAEKAGWWKQRQRCFLWDELWHIERKVAPLASPSRLAARYNLLLARCAEAGAWTTAVSVYRSTRSRGVVPRDTPKKREVGGPFSLEPFVYQHLLRAAKNASPPQPRAAMLVLREMRLRGEEPAAPHYNLVVCAXXXXXXXXXXXSTLKPLE-----------EVARC----AADGENKTRGGTSIAPPEDTTRNGGIDTVGSVPLVAE----RTVLGTSTPLKESPAAECADDENLTDGGKKSLCLLSAGSKAVEFRRAEHAEGAWRLALEVIADMRSRGVAPTEVTFRTLVECCRCAAAAPSPKLTSDGKERHGSRPADVYAALKEAGVPLRFCYQAGLGNALKGGRRFPEYVAELSR 462
            MKDVSD ID  KQL GRE  SK V+ EL LA A+A+RLSLHVNAWTT +L QELERIWLQ VRA A +D QFQH+V EW+ +C AL  L  T+   S+  +AE+ A  T+IRDC++RAG+  KA+K GWWKQRQ  FL +EL HIERKVAPLA PSRL ARYNLLLARCAE G W  AVS Y+S R+RGV+ +    +R+    FSL+P VYQHLLRAAKNA+PPQPRAA+ VLREMRLRGEEP A HYNLVV A           S L PL+           E   C     ADG  K  G       E  +  G + T    P  A+       +  +  LK++      D E++ D      CLL     A++ R AE A  +WRLAL+VIADMR  GV PT VTF+TLVECCRCAAAA    +        GS PA+VY+ALKEAG+P RFCYQAGLGNA+KG R FP YVAE+SR
Sbjct:    1 MKDVSDGIDNFKQLPGREKTSKTVEQELALAAAAARRLSLHVNAWTTAELLQELERIWLQAVRAEATIDPQFQHVVTEWETACAALSRLSRTAQEDSVTGQAERHASATRIRDCRIRAGVGSKAKKTGWWKQRQMRFLREELRHIERKVAPLADPSRLVARYNLLLARCAEVGGWAIAVSAYQSARARGVITKPMNNRRDANPSFSLKPLVYQHLLRAAKNATPPQPRAALHVLREMRLRGEEPVATHYNLVVSACARAAAVAASTSALMPLDRDGTEGHAVLREDRLCQDIGGADGHKK-EGFCGAIHLESDSSGGVVATENETPKPAKLGSGHKCVAKNMRLKQTAFGAKVDVEDVPDR----CCLLPTAGDAMQCRGAEAAGDSWRLALDVIADMRMSGVTPTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVYSALKEAGIPTRFCYQAGLGNAVKGRRCFPAYVAEISR 476          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig49.12826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJQ2_ECTSI5.410e-16056.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7G8_9PHAE1.040e-15454.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 155..298
e-value: 3.0E-8
score: 35.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig49contigL-elsbetiae_contig49:8688..10317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig49.12826.1mRNA_L-elsbetiae_contig49.12826.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig49 7621..10366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig49.12826.1 ID=prot_L-elsbetiae_contig49.12826.1|Name=mRNA_L-elsbetiae_contig49.12826.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=463bp
MKDVSDSIDQSKQLRGRELYSKEVDSELTLAGASAQRLSLHVNAWTTPQL
SQELERIWLQVVRAVAKVDLQFQHLVNEWQKSCEALEELMSTSHAASIDA
EAEQDAVGTKIRDCQLRAGIEPKAEKAGWWKQRQRCFLWDELWHIERKVA
PLASPSRLAARYNLLLARCAEAGAWTTAVSVYRSTRSRGVVPRDTPKKRE
VGGPFSLEPFVYQHLLRAAKNASPPQPRAAMLVLREMRLRGEEPAAPHYN
LVVCACARAAAAAASTSTLKPLEEVARCAADGENKTRGGTSIAPPEDTTR
NGGIDTVGSVPLVAERTVLGTSTPLKESPAAECADDENLTDGGKKSLCLL
SAGSKAVEFRRAEHAEGAWRLALEVIADMRSRGVAPTEVTFRTLVECCRC
AAAAPSPKLTSDGKERHGSRPADVYAALKEAGVPLRFCYQAGLGNALKGG
RRFPEYVAELSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf