prot_L-elsbetiae_contig4893.12815.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4893.12815.1
Unique Nameprot_L-elsbetiae_contig4893.12815.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length210
Homology
BLAST of mRNA_L-elsbetiae_contig4893.12815.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 5.340e-19
Identity = 50/127 (39.37%), Postives = 62/127 (48.82%), Query Frame = 0
Query:   10 GDCCVCECDG--YGCGTIAFDCLDPTAGTDCPTPNPALSSTAYSGN---SDSXXXXXXXXXXXXXXXXXXXXXXXXS--GDGYCDPSHNNEGCNWDDGDCCSCNCEDSEFECGIVGFSCLDPASVCS 129
            GDCC C C    Y CG   FDC DP+  TDC T +   S   Y G    +D                         S  GDG+CD  +N+  C WD GDCC C+C D+ ++CG+VG+ CLDP S CS
Sbjct:  337 GDCCACTCVSGYYTCGYYTFDCEDPSVSTDCSTTSTLDSDDWYGGYGYYTDDIWDSGDDFYGTYDVYNYGSTACISSYTGDGWCDSFYNHADCEWDGGDCCECDCVDATYDCGVVGYDCLDPTSSCS 463          
BLAST of mRNA_L-elsbetiae_contig4893.12815.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 9.320e-12
Identity = 44/127 (34.65%), Postives = 54/127 (42.52%), Query Frame = 0
Query:   10 GDCCVCECDGYG-------CGTIAFDCLDPTAGTDCPTPNPALSSTAYSGNSDSXXXXXXXXXXXXXXXXXXXXXXXXSGDGYCDPSHNNEGCNWDDGDCCSCNCEDSEF-ECGIVGFSCLDPASVC 128
            GDCC C C  Y        CG   +DC+DP A + C T +P  S  A +   +                          GDG CD  +NNE C+WD GDCCSC CE S +  C      C DP + C
Sbjct:  171 GDCCRCTCRDYNSWGYYTNCGYYGYDCMDPDAPSSCSTDSPTPSPAAGTDWPECEGYIYMI------------------GDGSCDYYNNNEECDWDGGDCCSCTCEGSSYYSCSSYSMDCQDPNANC 279          
BLAST of mRNA_L-elsbetiae_contig4893.12815.1 vs. uniprot
Match: A0A6H5K5D1_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D1_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.170e-11
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 0
Query:   83 DGYCDPSHNNEGCNWDDGDCCSCNCEDSEFECGIVGFSCLDPASVC 128
            DG+CD S+N  GC++D GDCCSC+C D  ++CG+VGF+C+DP S C
Sbjct:   37 DGFCDSSNNISGCDYDGGDCCSCDCLDDTYQCGVVGFTCIDPTSSC 82          
BLAST of mRNA_L-elsbetiae_contig4893.12815.1 vs. uniprot
Match: D7FSP3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP3_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 3.340e-11
Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   83 DGYCDPSHNNEGCNWDDGDCCSCNCEDSEFECGIVGFSCLDPASVCSGTSSSGAITGVYHDDDVTSNSP--GYEAGDSGED 161
            DG CD S+NN GC +D GDCCSC+C D  +ECG  GF+CLDP+S C+           Y DD    +SP   Y+  D G+D
Sbjct:   37 DGMCDSSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCT-------YHHYYDDDGDLYDSPTYDYDVDDFGDD 110          
BLAST of mRNA_L-elsbetiae_contig4893.12815.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 3.930e-11
Identity = 45/129 (34.88%), Postives = 56/129 (43.41%), Query Frame = 0
Query:   10 GDCCVCEC---------DGYGCG-TIAFDCLDPTAGTDCPTPNPALSSTAYSGNSDSXXXXXXXXXXXXXXXXXXXXXXXXSGDGYCDPSHNNEGCNWDDGDCCSCNCEDSEFECGIVGFSCLDPASVC 128
            GDCC C C         DG  C  +  F C+DP A        P +       N D                          GDG+CD  +NN+ C +D GDCCSC C D  +ECGIVGF C+DP++ C
Sbjct:  269 GDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDA--------PCV-------NDDDITVDMMDTCGGHPINF---------GDGWCDDDNNNKECGYDSGDCCSCTCVDGTYECGIVGFDCVDPSAEC 373          
BLAST of mRNA_L-elsbetiae_contig4893.12815.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 6.480e-11
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   83 DGYCDPSHNNEGCNWDDGDCCSCNCEDSEFECGIVGFSCLDPA 125
            DG+CD  +NN  CNWD GDCC C C DS++ECGI GFSCLDP+
Sbjct: 1979 DGWCDLENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDPS 2021          
BLAST of mRNA_L-elsbetiae_contig4893.12815.1 vs. uniprot
Match: A0A6H5KN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN00_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 5.050e-8
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   83 DGYCDPSHNNEGCNWDDGDCCSCNCEDSEFECG-IVGFSCLDPASVC 128
            DG CD S+NN  C++D GDCCSC+C D  +ECG +  F+C+DP+S C
Sbjct:  136 DGMCDSSNNNSNCDYDGGDCCSCDCFDDTYECGSVTAFTCIDPSSSC 182          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4893.12815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JVP4_9PHAE5.340e-1939.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX77_ECTSI9.320e-1234.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5D1_9PHAE1.170e-1158.70LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FSP3_ECTSI3.340e-1146.91LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JTT4_9PHAE3.930e-1134.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG7_ECTSI6.480e-1167.44LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KN00_9PHAE5.050e-855.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4893contigL-elsbetiae_contig4893:3769..5341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4893.12815.1mRNA_L-elsbetiae_contig4893.12815.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4893 3769..5341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4893.12815.1 ID=prot_L-elsbetiae_contig4893.12815.1|Name=mRNA_L-elsbetiae_contig4893.12815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=210bp
MCHDAPSPKGDCCVCECDGYGCGTIAFDCLDPTAGTDCPTPNPALSSTAY
SGNSDSSTAYSGNSDSSTAYSGYYGSECVWSGDGYCDPSHNNEGCNWDDG
DCCSCNCEDSEFECGIVGFSCLDPASVCSGTSSSGAITGVYHDDDVTSNS
PGYEAGDSGEDDDIVDDDAVYDDGGSYGGDRDFSGSTADSDSAEIVGVQD
IADGSSGSSF
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