prot_L-elsbetiae_contig4878.12794.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4878.12794.1
Unique Nameprot_L-elsbetiae_contig4878.12794.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length716
Homology
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 540 bits (1392), Expect = 4.130e-184
Identity = 290/397 (73.05%), Postives = 327/397 (82.37%), Query Frame = 0
Query:  238 ELSESGHWDCVPFTVSVDGSATTPTPAPTAGSRDRVATTTAPASAAAPAPTTPAATSXXXXXXXXXXXXXXXXXXXXXXXGEPGSPGVPPVPVPPKTVCDPAAPLAFSYDPREELNADGEVEIEGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEIT-ASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMH---DNHIYGFDPHDDSDYLTIRNNTVWN 630
            ELSE+G WDC PFTV+ D SA  PTPAPT GSR+  +TTTAPA              XXXXXXXXXXX    XXXXX   GEPGSPGVPP+PVP KTVCDPAA L+F+YD RE+       EIEGSLVTI H+SG+RTELGC TLTEMWQWLQ+GP+GVPTDLL PVDPAT   IT AST+ +LTGVWL+RTSLAV+NGVT++LKGT+  GDCDELKIRSSPTLIHAVRGHGGNLD+YKT I+SWDE  L  H+L  DS G+EPRSYIACSSEVVNE+DTCD G AR D GECRMD+VDSEL +MGY A+ESYGITWKVRGFC D +NPEVF++VNVYGD+TNC++HHMWYGMYSYGHQ GVWT++LMH   DN++YGFDPHDDSDYLTIRNNTVWN
Sbjct:   23 ELSENGPWDCAPFTVAADPSA--PTPAPTPGSREVPSTTTAPAXXXX---------XXXXXXXXXXXXVVTAXXXXXPATGEPGSPGVPPIPVPAKTVCDPAAELSFTYDAREDE------EIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWN 402          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 472 bits (1215), Expect = 9.020e-157
Identity = 221/291 (75.95%), Postives = 255/291 (87.63%), Query Frame = 0
Query:  341 PLAFSYDPREELNADGEVEIEGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEIT-ASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 630
            PL+F+YD RE+       EIEG+LVTI H+SG+RTELGC TLTEMWQWLQ+GP+GVPTDLL PVDPAT   IT AST+ +LTGVWL+RTSLAV+NGVT++LKGT+  GDCDELKIRSS TLIHAVRGHGGNLD+YKT I+SWDE  L  H+L  DS G+EPRSYIAC+SEVVNE+DTCD G AR D GECRMD+VDSEL +MGY A+ESYGITWKVRGFC D +NPEVF++VNVYGD+TNC++HHMWYGMYSYGHQ GVWT++LMHDN++YGFDPHDDSDYLTIRNNTVWN
Sbjct:   50 PLSFTYDAREDE------EIEGALVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTSVGGDCDELKIRSSTTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACTSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWN 334          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 430 bits (1106), Expect = 9.440e-137
Identity = 344/736 (46.74%), Postives = 438/736 (59.51%), Query Frame = 0
Query:    8 VVSIPAPPLIAGESFTATWTLDAEQEMTTGDINVYTITLEPCASSTQSSCTCESEGNALAVSLCES-----CSDSDQSYDVEVPRDSAPGVYVVRVSLSEDPTSVFACSEGFTVQEEEVKEAGAPGIE--AGDTS-SGAYLRALEGQSASPGEAFTAKWYYDAGSDPEEXXXXGAGGSAGDFAVDLYSCAD-GGCAGGSCGTFVASLCGESGCYDPGTGDYDVVLPATVTPGAFSLFVAELSESGHWDCVPFTVSVDGSATTPTPAPTAGSRDRVATTTAPASAAAPAPTTPAATSXXXXXXXXXXXXXXXXXXXXXXXGEP-----------------GSPGVPPVPVPPKTVCDPAAPLAFSYDPREELNADGEVEIEGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESD-TCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPE-VFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVETSRVMLTGNTLVENKWGARYTVGASDN 715
            VVS PA    AGE+F  ++    +   TTGD+  + I L     S  ++  C   G+    SLC       CSDSD SYDV++P D+  G Y +++ L++D  SV+AC++ F V     +  G  G+   AG+ S S   + A        G AFT++W YD G         GAGG  G F ++L +C D G C  G CGTF  +     GCYDPGTGDYDV +PA    G + L V    ++    C   +  V  +   P  +PT    D            AP         XXXXXXXXXXXXXXXXXXX     EP                 GSPG PP PVP K VCD +A L+F Y   +             LVT+AH+SG+R+E GC TLT+++ WL T P  VPT +L+ VD  T+  +  +T A  TG+WL+ TS+ +TNGVT ++KGT+  GDCDELK  S+    + + GHGGN+D+  T +RSWD      H+L     G   RS+IAC SEVV ++D TCDG +A+ DMGECRMD+VDS ++Y GY+ TESYGITWKVRG C D +N + +F+ V VYGDM N +++ MWYG YSYGH  GVWT+NLMHDNH+YGFDPHDDSDYLTI  NT +N          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+LVETS  +++ N   +N+WG R  +G++ N
Sbjct:   10 VVSTPANSKEAGETFGLSFAY-TDSGGTTGDLTSFDIELRS-HDSADATTGC---GDEALASLCTREAAGVCSDSDGSYDVQIPEDAEAGKYSIKIMLADDD-SVYACTDAFNV----TRPTGEDGLAILAGEASVSEVEVEAASSTYLEQGAAFTSRWVYDDGG--------GAGG--GTFEINLNACGDEGACENGGCGTFSTAXXXXXGCYDPGTGDYDVTVPADQAVGEYKLEVVSADDTDVSSCTASSFLVVEAGGAPAVSPTETPVDETP---------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSSEPVAXXXXXXXXXXXXXXXGSPGFPPTPVPDKVVCDDSAELSFVYTLEDTKRP---------LVTVAHASGDRSEAGCLTLTKLYDWLATEPADVPTGMLLTVDSTTETAVNGTT-ATPTGIWLLDTSVVITNGVTFEIKGTSIGGDCDELKFSSTKKAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDSDDGTTNRSFIACVSEVVVDADETCDG-TAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSNCVVSDNEFTDNRWGFRIILGSTGN 705          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 3.000e-129
Identity = 355/781 (45.45%), Postives = 437/781 (55.95%), Query Frame = 0
Query:    4 SISDVVSIPAPP--LIAGESFTATWTLDAEQEM--TTGDINVYTITLEPCASSTQSSCTC---ESEGNALAVSLCE-----SCSDSDQSYDVEVPRDSAPGVYVVRV------------SLSEDPTSVFACSEGFTVQEEEVKEAGAPGIEAGDTSSGAYLRALEGQSASPGEAFTAKWYYDAGSDPEEXXXXGAGGSAGDFAVDLYSCADGGCAGGSCGTFVASLCGESGCYDPGTGDYDVVLPATVTPGAFSLFVAELSE-----SGHWDCVPFTVSVDGSAT----TP-----------TPAPTAGSRDRVATTTAPASA------------------AAPAPTTPAATSXXXXXXXXXXXXXXXXXXXXXXXGEPGSPGVPPVPVPPKTVCDPAAPLAFSYDPREELNADGEVEIEGS----LVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANG-DCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSI-GEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPE-VFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVETSRVMLTGNTLVENKWGARYTVGASDN 715
            +++++ ++ AP   L AG   T  W    +     TTGD+  + I L  C         C   E  GN   ++LC+     +C DSD SYDV +P D   G YV  V            S + D   V  CSE F V+E   K+  A               A    S  PG+AFTA+W Y+ G D E         + G F V+L+SCAD  C   SCGT VA LCGE+GCYDPG GDYDV +PA  TPG F L V  +S      S  +  V    S   S T    TP           TPAP   S                               AA A   P+ATS                       GE   PG PP PVP +  CDPAA +AFSY            ++E S    L+TI+H S +R E GC   + +W+W++T    V  +LL P DP T E  T    A  TGVWL+RTS+ VTNGV  ++ GT A G D D++ + SSPT    +RG GG+L  Y+T + SW E  LAPHMLP D+  G EPRSYI C SE++ E  TCDG  A+ + GECRMD+++S +SY+GYEATESYG++WKVRG C D +N + +FE V VYGD+ N +++ +WYG YSYGH  GVWTNN MHDNH+YGFDPHDDSDYLTI  NT +NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LVETS  ++T NTL +NK+G R  VG++DN
Sbjct:   74 ALTEITNVAAPRSNLTAGTYHTVGWVYSTDTGAWGTTGDLRPFEIELRSCGGDDAQQAECGLGELCGNEY-LALCDLERGAACMDSDGSYDVLIPEDVDAGRYVFSVTHLGLSSWTSGASSTSDAGLVTGCSESFFVEEAAAKDVLA-------------TEAPAASSLQPGDAFTAEWEYE-GVDGE---------ANGRFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRVSTDEEACSAEYFVVEAAASDSSSGTRAVSTPAXXXXXXXXXXTPAPVISSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEAAPVPSATSSATES------------------GE--IPGTPPTPVPLRVTCDPAAVVAFSY------------KLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDADVQ-ELLYPADPTTGEADTTGGAA--TGVWLLRTSVDVTNGVMFEVMGTEAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEGQTCDG-VAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLVETSHTLVTENTLNDNKYGVRLVVGSNDN 794          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 3.230e-114
Identity = 213/498 (42.77%), Postives = 275/498 (55.22%), Query Frame = 0
Query:  140 LRALEGQSASPGEAFTAKWYYDAGSDPEEXXXXGAGGSAGDFAVDLYSCADGGCAGGSCGTFVASLCGESGCYDPGTGDYDVVLPATVTPGAFSLFVAELSESGHWDCVPFTVSVDGSATTPTPAPTAGSRDRVATTTAPASAAAPAPTTPAATSXXXXXXXXXXXXXXXXXXXXXXXGEPGSPGVPPVPVPPKTVCDPAAPLAFSYDPREELNADGEVEIEGS----LVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANG-DCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSI-GEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPE-VFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 630
            + A    S  PG+AFTA+W Y+ G+D E         + G+F V+L+SCAD  C   SCGT VA LCGE+GCYDPG GDYDV +PA  TPG F L +                                                                                      PG PP PVPP+  CDPAA +AFSY            ++E S    L+TI+H S +R E GC   + +W+W++     V  +LL P DP T E  T    A  TGVWL+RTS+ VTNGV  ++ GT A G D D++ + SSPT    +RG GG+L  Y+T + SW E  LAPH LP D+  G EPRSYI C SE++ E  TCDG  A+ + GECRMD+++S +SY+GYEATESYG++WKVRG C+D +N + +F+ V VYGD+ + +++ +WYG YSYGH  G+WTNN MHDNH+YGFDPHDDSDYLTI  NT +N
Sbjct:  128 VEAPAASSLQPGDAFTAEWEYE-GADGE---------TNGNFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQI--------------------------------------------------------------------------------------PGTPPTPVPPRVTCDPAAVVAFSY------------KLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKAQDADVQ-ELLYPADPTTGEADTTGGAA--TGVWLLRTSVDVTNGVMFEVMGTQAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDG-VAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYN 513          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 4.580e-74
Identity = 132/254 (51.97%), Postives = 165/254 (64.96%), Query Frame = 0
Query:  378 GCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRS-SPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 630
            GC TL++++ W      G     +  +D     + TA+T    TG WL+   L VT G TL  +G    G+C EL+IRS S +    +RGHGGNL    T + SWD     P     D      RS+I C SEV+   DTC    A  +MGECRMD++DSE+ Y+GY+A+E+YGITWKVRGFCSD +NP+VF+DVNVYGDM   ++HHM+YGMYS+GHQ GVWTNNLMHDNH YGFDPHDDSDYL I  N V+N
Sbjct:   10 GCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTT---TGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG-----RSFIRCVSEVLTGEDTC----AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYN 251          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 8.020e-66
Identity = 126/292 (43.15%), Postives = 180/292 (61.64%), Query Frame = 0
Query:  344 FSYDPREELNADGEVEI----EGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRS-SPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 630
            F   P+ + ++   V +    E + + I  ++G RT  GC TL ++W+      Q V    L  VDP + +   ++T     G WL+   + V +G+TL + G +A GD DEL++ S S T IH +R +GG+LD   T + +WD    AP    +D      RSYI+  SEV+ +      G A+ +MGE RMD+ +SE++Y+GY  TE+YG+TWKVRGFC DK NPE+F+DVNVYG++ + ++HH  +G+Y+YGHQ G W  N MHDN  YGFDPHDDSD+LTI +N VWN
Sbjct:    2 FGTSPKPDCDSSIAVSVRYNAESARLYIESANG-RTRGGCVTLEQIWE------QQVDGSPLYAVDPKSGDVSRSAT-----GTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIH-LRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG-----RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWN 275          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 9.360e-66
Identity = 114/205 (55.61%), Postives = 142/205 (69.27%), Query Frame = 0
Query:  420 LTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSS-PTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTI 623
            +T  WL+ + L VT+G      G+   GDCDEL+I+S+ P   + VRGHGG++    T + SWD P   P         E  RS++ C SE +   +TCDG  A+ D GECRMD+++SE+ YMG+   ESYG+TWKVRGFC D +NP+VFE  NVYGD+ N N+HHM+YGMYSYGHQ GVWTNN MHDNH YGFDPHDDSDYLTI
Sbjct:   15 VTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQ-----ETYEGGRSFLNCVSEKLT-GETCDG-KAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTI 212          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.280e-65
Identity = 119/265 (44.91%), Postives = 165/265 (62.26%), Query Frame = 0
Query:  367 IAHSSGNRTELGCATLTEMWQWLQ-TGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 630
            +  +    T  GC TL ++W+     GP       L  VDP +    T++T     G WL+   L V +G+TL++ G+ A GD DEL++ S+      +R HGG+LD   T + SWD    +P     D    + RSYI+  SE++ + D    G+A+  MGE RMD+  SE+ Y+GY  +ESYG+TWKVRGFC DK+NPEVF+DVNVYG++ + ++HHM +G+Y+YGHQ G W  N MHDN  YGFDPHDDSD+LTI +N V+N
Sbjct:   57 LESADNGTTRGGCVTLGQIWESRAGKGP-------LYAVDPDSGNVSTSAT-----GTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSP-----DEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYN 304          
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 2.090e-65
Identity = 126/297 (42.42%), Postives = 179/297 (60.27%), Query Frame = 0
Query:  339 AAPLAFSYDPREELNADGEVEIE----GSLVTI-AHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 630
            AA  A   DP  + + D ++E+     G+   +   S+   T  GCATL ++W+   +     P   L  VDP + +     T     G WL+   L V +G+TL + GT   GD DEL++ S+      +R HGG+LD   T + SWD    +P     D    + RSYI+  SE+V + D    G+A+  MGE RMD+ +SE+ Y+G++ +ESYG+TWKVRGFC DK+NPE+F+DVNVYG+M + ++HH+ +G+Y+YGHQ G W  N MHDN  YGFDPHDDSD+LTI +N V+N
Sbjct:   28 AADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWE---SRAGKAP---LYAVDPDSGDVSETET-----GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSP-----DEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYN 308          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNF4_9PHAE4.130e-18473.05MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FWW1_ECTSI9.020e-15775.95Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G257_ECTSI9.440e-13746.74Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5J745_9PHAE3.000e-12945.45MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
D7G261_ECTSI3.230e-11442.77Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI4.580e-7451.97Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE8.020e-6643.15Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FIU4_ECTSI9.360e-6655.61Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI1.280e-6544.91Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI2.090e-6542.42Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 642..664
e-value: 16.0
score: 14.4
coord: 666..688
e-value: 11.0
score: 14.9
coord: 618..640
e-value: 0.78
score: 18.8
coord: 689..710
e-value: 4800.0
score: 2.3
coord: 572..593
e-value: 3200.0
score: 3.7
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 577..698
e-value: 5.6E-16
score: 58.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 400..716
e-value: 2.4E-84
score: 285.5
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 659..703
e-value: 4.6E-6
score: 24.2
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 577..711

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4878contigL-elsbetiae_contig4878:943..12457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4878.12794.1mRNA_L-elsbetiae_contig4878.12794.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4878 943..12457 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4878.12794.1 ID=prot_L-elsbetiae_contig4878.12794.1|Name=mRNA_L-elsbetiae_contig4878.12794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=716bp
MSLSISDVVSIPAPPLIAGESFTATWTLDAEQEMTTGDINVYTITLEPCA
SSTQSSCTCESEGNALAVSLCESCSDSDQSYDVEVPRDSAPGVYVVRVSL
SEDPTSVFACSEGFTVQEEEVKEAGAPGIEAGDTSSGAYLRALEGQSASP
GEAFTAKWYYDAGSDPEEEEEEGAGGSAGDFAVDLYSCADGGCAGGSCGT
FVASLCGESGCYDPGTGDYDVVLPATVTPGAFSLFVAELSESGHWDCVPF
TVSVDGSATTPTPAPTAGSRDRVATTTAPASAAAPAPTTPAATSAPTIPA
TPAPTTAPTAAPAAAPTGEPGSPGVPPVPVPPKTVCDPAAPLAFSYDPRE
ELNADGEVEIEGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDL
LVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCD
ELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEP
RSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYG
ITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWT
NNLMHDNHIYGFDPHDDSDYLTIRNNTVWNNGKHGIIASKRCDHVVIMDN
TVDTSGGSGIMLHRSCDDSIISGNVVTGSADAGIALVETSRVMLTGNTLV
ENKWGARYTVGASDNQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence