prot_L-elsbetiae_contig4855.12762.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4855.12762.1
Unique Nameprot_L-elsbetiae_contig4855.12762.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length109
Homology
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BLAST of mRNA_L-elsbetiae_contig4855.12762.1 vs. uniprot
Match: A0A6H5JSB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB4_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.770e-22
Identity = 55/119 (46.22%), Postives = 70/119 (58.82%), Query Frame = 0 
Query:    2 VRVEKFVIDHEVYISSASCFCSACREGCYDECFVRASYPALVPKRVLGVVEETVTLDTGVDPAHVGAVVG----------------DSIKQVKGVTFGKRQNARVMQRITGTEVEKSLL 104
            V VEK  +DHEVY S +SCFCSACR   YD+CFV A YPALVPK  L VVEE V +DTGVDP      V                 D+ K+ + + F K+ +  +MQR+TGT+ E+  +
Sbjct:  642 VSVEKRTVDHEVYTSQSSCFCSACRVRGYDKCFVFAKYPALVPKLQLSVVEEKVVMDTGVDPVGAEEKVXXXXXXXXXXXXXXXEVDARKEKQEIKFRKKSSVCLMQRVTGTQFEEKYI 760
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4855.12762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JSB4_9PHAE2.770e-2246.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4855contigL-elsbetiae_contig4855:2169..2495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4855.12762.1mRNA_L-elsbetiae_contig4855.12762.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4855 2056..2622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4855.12762.1 ID=prot_L-elsbetiae_contig4855.12762.1|Name=mRNA_L-elsbetiae_contig4855.12762.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=109bp
MVRVEKFVIDHEVYISSASCFCSACREGCYDECFVRASYPALVPKRVLGV
VEETVTLDTGVDPAHVGAVVGDSIKQVKGVTFGKRQNARVMQRITGTEVE
KSLLEQSR*
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