prot_L-elsbetiae_contig4843.12748.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4843.12748.1
Unique Nameprot_L-elsbetiae_contig4843.12748.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig4843.12748.1 vs. uniprot
Match: D7FHU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU4_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 1.860e-48
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0 
Query:    1 MVVGRRRSFGERENKKDGLVTDIYEEPARGMPNVWCMTVNNTRCVRLVGRCGWGTWRIANGVDNSWVAAWDAKYGYSTPAT 81
            MVVGRRRSFGERENKKDGLVTDIY+EPARGMPN+WCMTVNNT CVRLVGRCGWGTWRIANGVD   VAAWDAK GYSTPAT
Sbjct:    1 MVVGRRRSFGERENKKDGLVTDIYDEPARGMPNLWCMTVNNT-CVRLVGRCGWGTWRIANGVDYDVVAAWDAKDGYSTPAT 80
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4843.12748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHU4_ECTSI1.860e-4891.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4843contigL-elsbetiae_contig4843:10049..11341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4843.12748.1mRNA_L-elsbetiae_contig4843.12748.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4843 7519..11341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4843.12748.1 ID=prot_L-elsbetiae_contig4843.12748.1|Name=mRNA_L-elsbetiae_contig4843.12748.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
MVVGRRRSFGERENKKDGLVTDIYEEPARGMPNVWCMTVNNTRCVRLVGR
CGWGTWRIANGVDNSWVAAWDAKYGYSTPATVPNLAGWETPKYR
back to top