prot_L-elsbetiae_contig11386.1213.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11386.1213.1
Unique Nameprot_L-elsbetiae_contig11386.1213.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length188
Homology
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A6H5L3G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G6_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 4.950e-99
Identity = 150/189 (79.37%), Postives = 159/189 (84.13%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREA-AAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDTRYLLPRRVTSGRGGAAPA 188
            VFTWGHGSTGALGHGV ED+PTP +V+GFGR+   +A +GT E               + PDAD LATSVACGAWHTLVLT AGKV+AFGDGFTGQLGL DRGGE ESRAL PRVVRIERNAGGGGGSPGDV +TEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTD RYLLPRRVTSGRGGAAPA
Sbjct:   65 VFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDVDRSATQGTDEQ--------------DGPDADVLATSVACGAWHTLVLTKAGKVYAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDRRYLLPRRVTSGRGGAAPA 239          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 3.630e-89
Identity = 151/189 (79.89%), Postives = 157/189 (83.07%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGR-EAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDTRYLLPRRVTSGRGGAAPA 188
            VFTWGHGSTGALGHGV ED+PTP +V+GFGR EA +A +G  E  D              PDAD LATSVACGAWHTLVLT AGKV AFGDGFTGQLGL DRGGE ESRAL PRVVRIERNAGGGGGSPGDV +TEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPV D RYLLPRRVTSGRGGAAPA
Sbjct: 1780 VFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGAGEQDD--------------PDADILATSVACGAWHTLVLTKAGKVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVADKRYLLPRRVTSGRGGAAPA 1954          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A2P4XMA0_9STRA (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMA0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 7.590e-16
Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADF-LATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 160
            VFTWG GS+GALGHG  ++   P L+ G                   T   +   D EH  ++  + TS+ACG++HTL  T+ G ++ +GD   GQLG+ +     +   L P+ +R+          P   +I  +ACG+F+SAV +S+G+L+ WG P A
Sbjct:  816 VFTWGFGSSGALGHGNQDNCLEPKLLEG-----------------PWTKGSNLEFDGEHLTSEASIVTSIACGSYHTLASTSDGVLYGWGDAAAGQLGV-EHTTATDMVVLSPKQIRV----------PTSSKIRGIACGTFTSAVCTSQGHLFLWGSPAA 948          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: H3GZM4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZM4_PHYRM)

HSP 1 Score: 81.3 bits (199), Expect = 1.690e-14
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 160
            VFTWG GS+GALGHG  ++   P L+ G              S D +     E+   E P    + TS+ACG +HTL  T+ G ++ +GD   GQLG+     + +   L P  + +  NAG          +  ++CG+F++AV ++ G+LY WG P A
Sbjct: 1482 VFTWGFGSSGALGHGNRDNCLEPRLLEGPWTS----------SVDVEF--DGENLSSESP----VVTSIACGGYHTLAATSGGVLYGWGDAAAGQLGVEHITAQ-DMVVLSPEEITVPTNAG----------LRGISCGTFTTAVCTNSGHLYMWGSPAA 1614          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A0W8DL90_PHYNI (E3 ubiquitin-protein ligase HERC2 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DL90_PHYNI)

HSP 1 Score: 79.0 bits (193), Expect = 1.030e-13
Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADF----------LATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 160
            VFTWG GS+GALGHG  ++   P LV G                            + +P+ DF          +  SV CG++HTL  T  G ++ +GD   GQLG+ +   + +     P  +R+  ++G          I  +ACG+F+SAV +++G+L+ WG P A
Sbjct: 1097 VFTWGFGSSGALGHGARDNCLIPKLVEG---------------------------PWTNPNMDFDGETLTHDISVVVSVKCGSYHTLAATNDGVLYGWGDAAAGQLGVENLTAQ-DMVVPSPTKIRVPTSSG----------IRGIACGTFTSAVCTTQGHLFMWGSPAA 1228          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: W2Q1R4_PHYPN (PH domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2Q1R4_PHYPN)

HSP 1 Score: 79.0 bits (193), Expect = 1.050e-13
Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADF----------LATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 160
            VFTWG GS+GALGHG  ++   P LV G                            + +P+ DF          +  SV CG++HTL  T  G ++ +GD   GQLG+ +   + +     P  +R+  ++G          I  +ACG+F+SAV +++G+L+ WG P A
Sbjct: 1467 VFTWGFGSSGALGHGARDNCLIPKLVEG---------------------------PWTNPNMDFDGETLTHDISVVVSVKCGSYHTLAATNDGVLYGWGDAAAGQLGVENLTAQ-DMVVPSPTKIRVPTSSG----------IRGIACGTFTSAVCTTQGHLFMWGSPAA 1598          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A3R7FZD2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FZD2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.180e-13
Identity = 53/160 (33.12%), Postives = 78/160 (48.75%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 160
            VFTWG GS+GALGHG  E+   P  + G         R T +   A+ P                 TS+ACG++HTLV T  G ++ +GD   GQLG+ +     +   L P  +RI  ++G          +  + CG+F+SAV + +G ++ WG P A
Sbjct:  208 VFTWGFGSSGALGHGTRENCLKPKRIDGPWANIDDL-RQTVKKQLAEVP---------------FVTSIACGSYHTLVSTDGGTLYGWGDAAAGQLGV-ELVSAPDMVVLSPTKLRIPSSSG----------LRSITCGTFTSAVCTQQGQIFLWGSPAA 340          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A0W8D4U4_PHYNI (Mitogen-activated protein kinase kinase 6 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D4U4_PHYNI)

HSP 1 Score: 75.9 bits (185), Expect = 1.220e-12
Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADF----------LATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 160
            VFTWG GS+GALGH   ++   P LV G                            + +P+ DF          +  SV CG++HTL  T  G ++ +GD   GQLG+ +   + +     P  +R+  ++G          I  +ACG+F+SAV +++G+L+ WG P A
Sbjct: 1449 VFTWGFGSSGALGHRARDNCLIPKLVEG---------------------------PWTNPNMDFDGETLTHDISVVVSVKCGSYHTLAATNDGVLYGWGDAAAGQLGVENLTAQ-DMVVPSPTKIRVPTSSG----------IRGIACGTFTSAVCTTQGHLFMWGSPAA 1580          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A5D6YAN1_9STRA (PH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAN1_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.120e-12
Identity = 52/162 (32.10%), Postives = 77/162 (47.53%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIE--RNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 160
            VFTWG G++GALG G  ++   P  V+G  ++                       D +   A    T++ACG +HTLV T+AGK++ +GD   GQLG +      +   L P  + +   R     G  P  +R  EV+ G+F+SAV   +G L+ WG   A
Sbjct: 1571 VFTWGFGNSGALGTGSRDNSLLPTKVSGAWQD-----------------------DEDESGAQATVTALACGGYHTLVATSAGKLYGWGDSAAGQLGAA-LVAAPDMIVLAPHEIPLAGVRTTPSSGSPPPTIR--EVSAGTFTSAVCLDDGRLFVWGSTAA 1706          
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A6F9DF68_9ASCI (E3 ubiquitin-protein ligase HERC2-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DF68_9ASCI)

HSP 1 Score: 70.9 bits (172), Expect = 6.560e-11
Identity = 57/183 (31.15%), Postives = 81/183 (44.26%), Query Frame = 0
Query:    1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAW--HTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVT---DTRYLLPRRV 178
            ++TWG G+ G LGH   +DQ  P LV G                                  +     V+CG    HTL LT  GKVF++GDG  G+LGL    G+ ES+  +P +V   +N          + IT+V CG + S  +S  G LY WG  ++    DP++   D   L+P+ V
Sbjct:  544 LYTWGCGNFGRLGHNNSDDQFVPKLVVGL--------------------------------QNHRVVFVSCGTADAHTLALTNDGKVFSWGDGDHGKLGL----GDTESKR-KPMLVEALKN----------LTITKVHCGKYISLALSESGKLYGWGLKNS-PRSDPLSYEFDDNILIPKLV 678          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3G6_9PHAE4.950e-9979.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS90_ECTSI3.630e-8979.89eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
A0A2P4XMA0_9STRA7.590e-1634.16Regulator of chromosome condensation (RCC1)-like p... [more]
H3GZM4_PHYRM1.690e-1433.75Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0W8DL90_PHYNI1.030e-1330.59E3 ubiquitin-protein ligase HERC2 n=1 Tax=Phytopht... [more]
W2Q1R4_PHYPN1.050e-1330.59PH domain-containing protein n=14 Tax=Phytophthora... [more]
A0A3R7FZD2_9STRA1.180e-1333.13Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A0W8D4U4_PHYNI1.220e-1230.00Mitogen-activated protein kinase kinase 6 n=1 Tax=... [more]
A0A5D6YAN1_9STRA3.120e-1232.10PH domain-containing protein n=1 Tax=Pythium brass... [more]
A0A6F9DF68_9ASCI6.560e-1131.15E3 ubiquitin-protein ligase HERC2-like n=1 Tax=Pha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 85..99
score: 43.33
coord: 1..5
score: 13.73
coord: 69..85
score: 45.1
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 83..146
e-value: 9.4E-8
score: 32.6
coord: 1..37
e-value: 6.8E-6
score: 26.6
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 69..79
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 1..82
score: 11.188
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 83..149
score: 12.574
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..183
e-value: 2.1E-25
score: 91.3
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 1..179
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 1..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11386contigL-elsbetiae_contig11386:3555..5713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11386.1213.1mRNA_L-elsbetiae_contig11386.1213.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11386 3553..5713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11386.1213.1 ID=prot_L-elsbetiae_contig11386.1213.1|Name=mRNA_L-elsbetiae_contig11386.1213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPP
GDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSD
RGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEG
NLYHWGKPDAFSDDDPVTDTRYLLPRRVTSGRGGAAPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II