mRNA_L-elsbetiae_contig11386.1213.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A6H5L3G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G6_9PHAE) HSP 1 Score: 296 bits (758), Expect = 4.950e-99 Identity = 150/189 (79.37%), Postives = 159/189 (84.13%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREA-AAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDTRYLLPRRVTSGRGGAAPA 564
VFTWGHGSTGALGHGV ED+PTP +V+GFGR+ +A +GT E + PDAD LATSVACGAWHTLVLT AGKV+AFGDGFTGQLGL DRGGE ESRAL PRVVRIERNAGGGGGSPGDV +TEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTD RYLLPRRVTSGRGGAAPA
Sbjct: 65 VFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDVDRSATQGTDEQ--------------DGPDADVLATSVACGAWHTLVLTKAGKVYAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDRRYLLPRRVTSGRGGAAPA 239
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI) HSP 1 Score: 295 bits (755), Expect = 3.630e-89 Identity = 151/189 (79.89%), Postives = 157/189 (83.07%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGR-EAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDTRYLLPRRVTSGRGGAAPA 564
VFTWGHGSTGALGHGV ED+PTP +V+GFGR EA +A +G E D PDAD LATSVACGAWHTLVLT AGKV AFGDGFTGQLGL DRGGE ESRAL PRVVRIERNAGGGGGSPGDV +TEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPV D RYLLPRRVTSGRGGAAPA
Sbjct: 1780 VFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGAGEQDD--------------PDADILATSVACGAWHTLVLTKAGKVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVADKRYLLPRRVTSGRGGAAPA 1954
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A2P4XMA0_9STRA (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMA0_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 7.590e-16 Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADF-LATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 480
VFTWG GS+GALGHG ++ P L+ G T + D EH ++ + TS+ACG++HTL T+ G ++ +GD GQLG+ + + L P+ +R+ P +I +ACG+F+SAV +S+G+L+ WG P A
Sbjct: 816 VFTWGFGSSGALGHGNQDNCLEPKLLEG-----------------PWTKGSNLEFDGEHLTSEASIVTSIACGSYHTLASTSDGVLYGWGDAAAGQLGV-EHTTATDMVVLSPKQIRV----------PTSSKIRGIACGTFTSAVCTSQGHLFLWGSPAA 948
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: H3GZM4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZM4_PHYRM) HSP 1 Score: 81.3 bits (199), Expect = 1.690e-14 Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 480
VFTWG GS+GALGHG ++ P L+ G S D + E+ E P + TS+ACG +HTL T+ G ++ +GD GQLG+ + + L P + + NAG + ++CG+F++AV ++ G+LY WG P A
Sbjct: 1482 VFTWGFGSSGALGHGNRDNCLEPRLLEGPWTS----------SVDVEF--DGENLSSESP----VVTSIACGGYHTLAATSGGVLYGWGDAAAGQLGVEHITAQ-DMVVLSPEEITVPTNAG----------LRGISCGTFTTAVCTNSGHLYMWGSPAA 1614
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A0W8DL90_PHYNI (E3 ubiquitin-protein ligase HERC2 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DL90_PHYNI) HSP 1 Score: 79.0 bits (193), Expect = 1.030e-13 Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADF----------LATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 480
VFTWG GS+GALGHG ++ P LV G + +P+ DF + SV CG++HTL T G ++ +GD GQLG+ + + + P +R+ ++G I +ACG+F+SAV +++G+L+ WG P A
Sbjct: 1097 VFTWGFGSSGALGHGARDNCLIPKLVEG---------------------------PWTNPNMDFDGETLTHDISVVVSVKCGSYHTLAATNDGVLYGWGDAAAGQLGVENLTAQ-DMVVPSPTKIRVPTSSG----------IRGIACGTFTSAVCTTQGHLFMWGSPAA 1228
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: W2Q1R4_PHYPN (PH domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2Q1R4_PHYPN) HSP 1 Score: 79.0 bits (193), Expect = 1.050e-13 Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADF----------LATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 480
VFTWG GS+GALGHG ++ P LV G + +P+ DF + SV CG++HTL T G ++ +GD GQLG+ + + + P +R+ ++G I +ACG+F+SAV +++G+L+ WG P A
Sbjct: 1467 VFTWGFGSSGALGHGARDNCLIPKLVEG---------------------------PWTNPNMDFDGETLTHDISVVVSVKCGSYHTLAATNDGVLYGWGDAAAGQLGVENLTAQ-DMVVPSPTKIRVPTSSG----------IRGIACGTFTSAVCTTQGHLFMWGSPAA 1598
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A3R7FZD2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FZD2_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.180e-13 Identity = 53/160 (33.12%), Postives = 78/160 (48.75%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 480
VFTWG GS+GALGHG E+ P + G R T + A+ P TS+ACG++HTLV T G ++ +GD GQLG+ + + L P +RI ++G + + CG+F+SAV + +G ++ WG P A
Sbjct: 208 VFTWGFGSSGALGHGTRENCLKPKRIDGPWANIDDL-RQTVKKQLAEVP---------------FVTSIACGSYHTLVSTDGGTLYGWGDAAAGQLGV-ELVSAPDMVVLSPTKLRIPSSSG----------LRSITCGTFTSAVCTQQGQIFLWGSPAA 340
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A0W8D4U4_PHYNI (Mitogen-activated protein kinase kinase 6 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D4U4_PHYNI) HSP 1 Score: 75.9 bits (185), Expect = 1.220e-12 Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADF----------LATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 480
VFTWG GS+GALGH ++ P LV G + +P+ DF + SV CG++HTL T G ++ +GD GQLG+ + + + P +R+ ++G I +ACG+F+SAV +++G+L+ WG P A
Sbjct: 1449 VFTWGFGSSGALGHRARDNCLIPKLVEG---------------------------PWTNPNMDFDGETLTHDISVVVSVKCGSYHTLAATNDGVLYGWGDAAAGQLGVENLTAQ-DMVVPSPTKIRVPTSSG----------IRGIACGTFTSAVCTTQGHLFMWGSPAA 1580
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A5D6YAN1_9STRA (PH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAN1_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 3.120e-12 Identity = 52/162 (32.10%), Postives = 77/162 (47.53%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAWHTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIE--RNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDA 480
VFTWG G++GALG G ++ P V+G ++ D + A T++ACG +HTLV T+AGK++ +GD GQLG + + L P + + R G P +R EV+ G+F+SAV +G L+ WG A
Sbjct: 1571 VFTWGFGNSGALGTGSRDNSLLPTKVSGAWQD-----------------------DEDESGAQATVTALACGGYHTLVATSAGKLYGWGDSAAGQLGAA-LVAAPDMIVLAPHEIPLAGVRTTPSSGSPPPTIR--EVSAGTFTSAVCLDDGRLFVWGSTAA 1706
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Match: A0A6F9DF68_9ASCI (E3 ubiquitin-protein ligase HERC2-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DF68_9ASCI) HSP 1 Score: 70.9 bits (172), Expect = 6.560e-11 Identity = 57/183 (31.15%), Postives = 81/183 (44.26%), Query Frame = 1
Query: 1 VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPGDEHPDYEHPDADFLATSVACGAW--HTLVLTAAGKVFAFGDGFTGQLGLSDRGGEAESRALQPRVVRIERNAGGGGGSPGDVRITEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVT---DTRYLLPRRV 534
++TWG G+ G LGH +DQ P LV G + V+CG HTL LT GKVF++GDG G+LGL G+ ES+ +P +V +N + IT+V CG + S +S G LY WG ++ DP++ D L+P+ V
Sbjct: 544 LYTWGCGNFGRLGHNNSDDQFVPKLVVGL--------------------------------QNHRVVFVSCGTADAHTLALTNDGKVFSWGDGDHGKLGL----GDTESKR-KPMLVEALKN----------LTITKVHCGKYISLALSESGKLYGWGLKNS-PRSDPLSYEFDDNILIPKLV 678 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11386.1213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11386.1213.1 >prot_L-elsbetiae_contig11386.1213.1 ID=prot_L-elsbetiae_contig11386.1213.1|Name=mRNA_L-elsbetiae_contig11386.1213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp VFTWGHGSTGALGHGVVEDQPTPMLVAGFGREAAAAARGTAESADAQTPPback to top mRNA from alignment at L-elsbetiae_contig11386:3553..5713- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11386.1213.1 ID=mRNA_L-elsbetiae_contig11386.1213.1|Name=mRNA_L-elsbetiae_contig11386.1213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2161bp|location=Sequence derived from alignment at L-elsbetiae_contig11386:3553..5713- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11386:3553..5713- >mRNA_L-elsbetiae_contig11386.1213.1 ID=mRNA_L-elsbetiae_contig11386.1213.1|Name=mRNA_L-elsbetiae_contig11386.1213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig11386:3553..5713- (Laminarionema elsbetiae ELsaHSoW15)back to top |