mRNA_L-elsbetiae_contig1008.121.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1008.121.1
Unique NamemRNA_L-elsbetiae_contig1008.121.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: D7G2A4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A4_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 5.580e-99
Identity = 162/219 (73.97%), Postives = 184/219 (84.02%), Query Frame = 1 
Query:  130 CTTILLVNRRKLEKYNDEPRITQHVVDMDK-ISTAAVPLLQEAQIGACFVAMGVGKPSKV-----TPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSKMVSWMLPLKYKEINIEDVGAAMVKVAVKSLDEKGPKVARYEGASLFGLLEPKP 768
            CT I+L+NRRKL+KY  EPR+TQH+V+MD  I+TAAVPLL++A + ACFV MGVGKPSKV     T EE EKVDL+IPTAFAQASKSAGCVRHISLLGSV ADA AKPS ++   GT AGGGLYLG+KG+VENNFEA GLESAAFFRP TL+GN NTP  AA++ KMVSW LPLK+KEI+IEDVG AMV+ AV SL+ KGP VARYEGASLFGLLE KP
Sbjct:    2 CTGIVLLNRRKLDKYEGEPRVTQHIVEMDSNIATAAVPLLRDAGVAACFVTMGVGKPSKVKSEQATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRIT---GTAAGGGLYLGVKGKVENNFEAVGLESAAFFRPCTLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLENKGPAVARYEGASLFGLLEDKP 217
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: A0A6H5K5V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V5_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.570e-75
Identity = 128/163 (78.53%), Postives = 140/163 (85.89%), Query Frame = 1 
Query:  280 MGVGKPSKVTPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSKMVSWMLPLKYKEINIEDVGAAMVKVAVKSLDEKGPKVARYEGASLFGLLEPKP 768
            MGVGKPSK T EE EKVDL+IPTAFAQASKSAGCVRHISLLGSV ADA AKPS ++   GT AGGGLYLG+KG+VENNFEA GLESAAFFRP TL+GN NTP  AA++ KMVSW LPLK+KEI+IEDVG AMV+ AV SL+ KGP VARYEGASLFGLLE KP
Sbjct:    1 MGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRIT---GTAAGGGLYLGVKGKVENNFEAVGLESAAFFRPCTLIGNANTPSAAASIHKMVSWALPLKFKEIHIEDVGKAMVRAAVDSLENKGPAVARYEGASLFGLLEDKP 160
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: A0A7S4IM72_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IM72_9EUKA)

HSP 1 Score: 171 bits (434), Expect = 2.000e-45
Identity = 98/239 (41.00%), Postives = 144/239 (60.25%), Query Frame = 1 
Query:   55 FSAAVLGASGNVGGCIVNSLLAEPRCTTILLVNRRKLEKYNDE----PRITQHVVDMDKISTAAVPLLQEAQIGACFVAMGVGKPSKVTPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSKMVSWMLPLKYKEINIEDVGAAMVKVAVKSLDEKGPKVAR-YEGASLFGLL 756
              AAVLGASGNVG  IV +LL +     +L+V RR+++ +  E     R+ Q VV MD +     P+LQ   I   F+ MG+G PSK TPE+LE+VD  +PT F++ S  +G V H+ +L SV A    + + + K   T AG  LY  +KG+VE N    G +S + FRPATL+GNTNTP +   ++    +++P +Y  I+I+ +G AMVK  ++ ++EK    A+ YEG SLF ++
Sbjct:    1 MKAAVLGASGNVGRVIVRNLLKKKEVEMVLVVGRREIKDFPQEIQTDERLVQKVVRMDHLKEDCAPILQGVDIS--FITMGIGAPSKSTPEDLERVDCALPTEFSETSHESG-VSHVVILTSVGAQYKGEQANVGK--STYAGSSLYRHLKGKVEKNLSQIGFDSVSIFRPATLIGNTNTPGLFNWLAPKFDFVVPTRYNSIHIDQLGEAMVKEGLRKVEEKEQSGAQIYEGESLFSVV 234
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: A0A7S0EJ53_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EJ53_9EUKA)

HSP 1 Score: 169 bits (428), Expect = 2.880e-44
Identity = 105/239 (43.93%), Postives = 149/239 (62.34%), Query Frame = 1 
Query:   58 SAAVLGASGNVGGCIVNSLL--AEPRCTTILLVNRRKLEKYNDEPRITQHVVDMDKISTA----AVPLLQEAQIGACFVAMGVGKPSKVTPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSKMVSWMLPLKYKEINIEDVGAAMVKVAVKSLD----EKGPKVARYEGASL 744
            +A VLG SG VG  +V +L   A P   ++ +  RR++ +++  P++TQH+V+MD  + A    A  L +     A F  MGVG PSK T EEL ++D  +P AFA A+K+AG VRH+S+L +V AD +AKP     +  T+AGGGLY  +KG++E+  E+ G ESA+ FRPATL+G  NTP   A +S  +  +LP KYK+  I  +GAAMV+ A  +L     E G +V  YEGA+L
Sbjct:   12 TAVVLGGSGAVGKEVVAALCKNATP-WVSVHVFGRRRIPEFDAFPKVTQHLVEMDDAAAASAGFATGLKEAGDASAAFNLMGVGTPSKSTEEELTRIDFAVPAAFASAAKAAG-VRHLSVLSAVGADKEAKPGGFLGFGKTSAGGGLYNMLKGKIEDKVESLGFESASTFRPATLIGTPNTPASIAWLSPKIDGLLPPKYKQTYINVLGAAMVQQAEHALAAPPAESGLRV--YEGAAL 246
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: A0A355F0Q8_9BACT (NAD(P)-bd_dom domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A355F0Q8_9BACT)

HSP 1 Score: 117 bits (294), Expect = 3.190e-26
Identity = 73/217 (33.64%), Postives = 111/217 (51.15%), Query Frame = 1 
Query:   46 MARFSAAVLGASGNVGGCIVNSLLAEPRCTTILLVNRRKLEKYNDEP---RITQHVVDMDKISTAAVPLLQEAQIGACFVAMGVGKPSKVTPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSKM----VSWMLPLKYKEINIEDVGAAM 675
            M  + A V+GA+G VG  +V  LLA PRC  +  + RR++  +   P   ++ Q V DM +               A F  +GVG+P K+  EE+ ++D++   AFA+ + +AG  RH+SLL S AA   A                 YL +KG  E    AAG+E  +FFRP+ LV       +   ++++    VSW+LP ++ EI +ED+G AM
Sbjct:    1 MDSYRALVIGATGAVGSALVRELLASPRCAAVTTLARRRVAMFEGLPGQEKLQQVVFDMSRPEEIEREAAMVPGCDAAFCTLGVGQPRKMAKEEVWRIDVESAAAFARGAHAAGA-RHVSLLSSAAATPQASS--------------FYLRLKGAAEEGVAAAGIERTSFFRPSLLVTREIRYGLQDRLTQLLIPAVSWLLPSRFHEIRVEDLGRAM 202
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: A0A1J5ITA5_9PROT (NAD(P)-bd_dom domain-containing protein n=1 Tax=Zetaproteobacteria bacterium CG2_30_46_52 TaxID=1805429 RepID=A0A1J5ITA5_9PROT)

HSP 1 Score: 88.2 bits (217), Expect = 4.720e-16
Identity = 72/216 (33.33%), Postives = 110/216 (50.93%), Query Frame = 1 
Query:   52 RFSAAVLGASGNVGGCIVNSLLAEPRCTTILLVNRRKLEKYNDEPRITQHVVDMDKISTAAVPLLQEAQIGACFVAMGVGKPSKVTPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSKMVSWML--PL------KYKEINIEDVGAAM 675
            +    +LGA+G VG  +V +L+ +P  + + L++RR++  Y D  RI  HVVD+   S  A  LL    +  C   MGVG+PSKVTPEE  +VD      FA A K+AG V H  LL SV++D  +                LYL  K  +E   +A   E  + F+P+ ++   N   ++  ++  + W L  PL      K++ I +ED+G A+
Sbjct:    4 KHQIVLLGATGAVGSEVVKNLILQPMTSRLSLLSRREVA-YTDH-RIENHVVDVFSPSFYA-HLLSGFDVAIC--TMGVGQPSKVTPEEFIRVDKTAVLDFASACKAAG-VAHFVLLSSVSSDVSSAS--------------LYLRTKAELEAGLKALNFERLSVFKPSMILTPKNRYGISQAITLKI-WPLISPLFWGGMRKFRGIKVEDLGKAI 198
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: A0A554SEG5_9PROT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Inquilinus sp. KBS0705 TaxID=2578108 RepID=A0A554SEG5_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 1.650e-14
Identity = 69/226 (30.53%), Postives = 111/226 (49.12%), Query Frame = 1 
Query:   55 FSAAVLGASGNVGGCIVNSLLAEPRCTTILLVNRRKLEKYNDEPRITQHVVDMDKISTAAVPLLQEAQIGACFVAMGVGKPSKVTPEELE--KVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMA-ATMSKMVSWMLPL------KYKEINIEDVGAAMVKVAVKSLDE 705
            + A + GASG +G  ++N LL  P    +L++ R+++   +   ++ Q V+D DK+   A  +   A     F  MG  K    TP+E++  K+D   P   A+ +K  G V+H  L+ S+ ADA  K S+             Y  +KG +EN+ +A GL+    ++P+ L G+ N P +A   M  +   + PL      KY+ I   +V  AM K   KSLD+
Sbjct:    3 YKAVIAGASGLIGSNLLNILLNAPEYDEVLVLVRKEIAIQHK--KLLQLVIDFDKLDNHAAAITGHA----VFSCMGTTKGQ--TPDEVQYIKIDHDYPLQLAKIAKQNG-VKHFHLVSSIGADA--KSSL------------FYTRLKGELENDLQAVGLDVLHIYQPSMLTGHRNKPRLADKVMGGLFKIINPLLIGGMKKYRSIKGSEVAGAMYK---KSLDD 202
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: A0A537JV52_9BACT (Oxidoreductase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A537JV52_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 7.920e-14
Identity = 70/234 (29.91%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   46 MARFSAAVLGASGNVGGCIVNSLLAEPRCTTILLVNRRKLEKYNDEPRITQHVVDMDKISTAAVPLLQEAQIGACFVAMGVG-KPSKVTPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTP----PMAATMSKMVSWMLPLKYKEINIEDVGAAMVKVAVKSLDEKGPKVARYE 732
            M+  +A ++GA+G +GG ++N +L +    T+ ++ RR     +  PR+ + +VD     +  V L     +   F A+G   K  K       KVD  IP    +  K  GC   + L+ SV A++ +K                YL +KG VE+  E  GLES    RP+ L+G          +   M K++S+ LP KYK I   DV  AM+  + K+  EKG  V  Y+
Sbjct:    1 MSAKTATLIGATGLIGGELLNLVLKDDYFQTVRILIRRPFNLVH--PRLEKKLVDFSDNDSLLVALDNSDVV---FCAVGTTQKKVKGDQAAYRKVDYDIPVHAGRFCKMVGCKIFV-LVSSVGANSKSK--------------NFYLKLKGEVEDEVETMGLESVHIMRPSMLLGERKESRPLEKIGQAMMKVLSFFLPSKYKPIKARDVAKAMLAASKKN--EKGFFVHEYD 212
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: A0A7V3X8M9_9BACT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Bacteroidia bacterium TaxID=2044936 RepID=A0A7V3X8M9_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 4.730e-13
Identity = 65/237 (27.43%), Postives = 115/237 (48.52%), Query Frame = 1 
Query:   55 FSAAVLGASGNVGGCIVNSLLAEPRCTTILLVNRRKLEKYNDEPRITQHVVDMDKISTAAVPLLQEAQIGACFVAMGVGKPSKVTPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSK----MVSWMLPLKYKEINIEDVGAAMVKVAVKSLDEKGPKVARYEGASLFGL 753
             +A ++GA+G +GG ++  LL +    T+ ++ RR L   +  P++ + +VD    S + +  +  + +  C +     K  K   E   K+D  IP   A+  K  GC + I L+ S  A+  +K                YL +KG  E    +AGL +    RP+ L+G+ +   +  ++ K    ++S+++P+KYK ++ + V  AM++ A K   EKG  V  YEG +L  L
Sbjct:    1 MTATLIGATGLIGGYLLEELLHDSFFDTVKILIRRPLNISH--PKLEKKMVDFSD-SDSLLVAISNSDVVFCSIGTTQRKV-KGDKEAYRKIDYDIPANLARFCKMTGCEKFI-LVSSAGANRKSKT--------------FYLKLKGETEEAVASAGLYAVHIMRPSVLLGHRSETRIGESIGKGVMKILSFLIPVKYKPVHAKVVAKAMMQAAKKK--EKG--VFIYEGHTLLAL 214
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BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Match: UPI00195D5A03 (oxidoreductase n=1 Tax=Archangium primigenium TaxID=2792470 RepID=UPI00195D5A03)

HSP 1 Score: 78.6 bits (192), Expect = 9.060e-13
Identity = 67/226 (29.65%), Postives = 104/226 (46.02%), Query Frame = 1 
Query:   58 SAAVLGASGNVGGCIVNSLLAEPRCTTILLVNRRKLEKYNDEPRITQHVVDMDKISTAAVPLLQEAQIGACFVAMGVGKPSKVTPEELEKVDLQIPTAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIKGRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSKMVSWML-----PLKYKEINIEDVGAAMVKVAVKSLDEKGPKV 720
            +A V GASG VGG ++++LL + R   +  + RR L   +  P++ QH VD  ++ T A+P  Q+A     F A+G       +      VD     AFA A++ AG  R + L+ ++ A+A ++                Y  +KG  E+   A G ES    +P+ L+G    P  A  +   VS +L     PL  + I    V  AMV +A +  D  G +V
Sbjct:    7 TALVAGASGLVGGALLDTLLEDARYREVHSLGRRPLP--HQHPKLVQHTVDFTRLDTQALPAAQDA-----FCALGTTLKKAGSQAAFRAVDHDYVLAFAHAARHAGAQRFV-LVSALGANARSRI--------------FYNRVKGEAEDALGAVGFESLVIVQPSLLLGAREEPQPAEQVMGAVSRVLAPLLRPLAARPIEGRTVARAMVTLAWR--DAPGTRV 208
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1008.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2A4_ECTSI5.580e-9973.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5V5_9PHAE1.570e-7578.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4IM72_9EUKA2.000e-4541.00Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A7S0EJ53_9EUKA2.880e-4443.93Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A355F0Q8_9BACT3.190e-2633.64NAD(P)-bd_dom domain-containing protein n=1 Tax=Ac... [more]
A0A1J5ITA5_9PROT4.720e-1633.33NAD(P)-bd_dom domain-containing protein n=1 Tax=Ze... [more]
A0A554SEG5_9PROT1.650e-1430.53NAD-dependent epimerase/dehydratase family protein... [more]
A0A537JV52_9BACT7.920e-1429.91Oxidoreductase n=1 Tax=Bacteroidetes bacterium Tax... [more]
A0A7V3X8M9_9BACT4.730e-1327.43NAD-dependent epimerase/dehydratase family protein... [more]
UPI00195D5A039.060e-1329.65oxidoreductase n=1 Tax=Archangium primigenium TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1008contigL-elsbetiae_contig1008:10506..16652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.2
Seed ortholog evalue1.1e-82
Seed eggNOG ortholog2880.D7G2A4
Hectar predicted targeting categoryother localisation
EggNOG OGs2D3WH@1,2ST0K@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-16_001890.1
Exons5
Model size2089
Cds size726
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815239.9409368-UTR-L-elsbetiae_contig1008:10505..118231622815239.9409368-UTR-L-elsbetiae_contig1008:10505..11823Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1008 10506..11823 -
1691682789.8328488-UTR-L-elsbetiae_contig1008:10505..118231691682789.8328488-UTR-L-elsbetiae_contig1008:10505..11823Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1008 10506..11823 -
1622815240.025601-UTR-L-elsbetiae_contig1008:16607..166521622815240.025601-UTR-L-elsbetiae_contig1008:16607..16652Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1008 16608..16652 -
1691682789.9046493-UTR-L-elsbetiae_contig1008:16607..166521691682789.9046493-UTR-L-elsbetiae_contig1008:16607..16652Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1008 16608..16652 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815239.9594436-CDS-L-elsbetiae_contig1008:11823..119221622815239.9594436-CDS-L-elsbetiae_contig1008:11823..11922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 11824..11922 -
1691682789.8528204-CDS-L-elsbetiae_contig1008:11823..119221691682789.8528204-CDS-L-elsbetiae_contig1008:11823..11922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 11824..11922 -
1622815239.9751754-CDS-L-elsbetiae_contig1008:12821..129921622815239.9751754-CDS-L-elsbetiae_contig1008:12821..12992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 12822..12992 -
1691682789.8627005-CDS-L-elsbetiae_contig1008:12821..129921691682789.8627005-CDS-L-elsbetiae_contig1008:12821..12992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 12822..12992 -
1622815239.9887865-CDS-L-elsbetiae_contig1008:14240..144381622815239.9887865-CDS-L-elsbetiae_contig1008:14240..14438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 14241..14438 -
1691682789.8745816-CDS-L-elsbetiae_contig1008:14240..144381691682789.8745816-CDS-L-elsbetiae_contig1008:14240..14438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 14241..14438 -
1622815240.0014646-CDS-L-elsbetiae_contig1008:15910..159771622815240.0014646-CDS-L-elsbetiae_contig1008:15910..15977Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 15911..15977 -
1691682789.883253-CDS-L-elsbetiae_contig1008:15910..159771691682789.883253-CDS-L-elsbetiae_contig1008:15910..15977Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 15911..15977 -
1622815240.0126457-CDS-L-elsbetiae_contig1008:16416..166071622815240.0126457-CDS-L-elsbetiae_contig1008:16416..16607Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 16417..16607 -
1691682789.8915787-CDS-L-elsbetiae_contig1008:16416..166071691682789.8915787-CDS-L-elsbetiae_contig1008:16416..16607Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1008 16417..16607 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1008.121.1prot_L-elsbetiae_contig1008.121.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1008 11824..16607 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1008.121.1

>prot_L-elsbetiae_contig1008.121.1 ID=prot_L-elsbetiae_contig1008.121.1|Name=mRNA_L-elsbetiae_contig1008.121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp
MARFSAAVLGASGNVGGCIVNSLLAEPRCTTILLVNRRKLEKYNDEPRIT
QHVVDMDKISTAAVPLLQEAQIGACFVAMGVGKPSKVTPEELEKVDLQIP
TAFAQASKSAGCVRHISLLGSVAADADAKPSMLSKWAGTTAGGGLYLGIK
GRVENNFEAAGLESAAFFRPATLVGNTNTPPMAATMSKMVSWMLPLKYKE
INIEDVGAAMVKVAVKSLDEKGPKVARYEGASLFGLLEPKP*
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mRNA from alignment at L-elsbetiae_contig1008:10506..16652-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1008.121.1 ID=mRNA_L-elsbetiae_contig1008.121.1|Name=mRNA_L-elsbetiae_contig1008.121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6147bp|location=Sequence derived from alignment at L-elsbetiae_contig1008:10506..16652- (Laminarionema elsbetiae ELsaHSoW15)
CTGTCTCTCGTTTCGCAGAGAAAAACTTAATAGCCCTCGGTCCCAATGGC
TAGGTTCTCAGCTGCGGTGCTCGGCGCCTCCGGCAATGTCGGCGGTTGCA
TCGTGAACTCTCTGCTGGCCGAACCCAGGTGCACAACGATCCTGCTCGTG
AATCGACGCAAGCTGGAGAAGTATAACGACGAGCCCAGGATCACCCAGCA
TGTGGTGGACATGGATAAGATTTCCACGGCGGCAGTGTGAGTAGTCGCGG
TCTCTCCGACAACCGACTCTCGGCGGTATCTTGGCGTTGTGAGCAAGAAT
TGCACACCTAAATTTTACCTGCTGCAGGGGGGGGATCGTTGAAAATGCGA
CACTTAGCCTGCTGACTCAATAGCCTATCGTCGCATCGATGTTCTAATGA
TATCGCCGTGCCTTGCGTCTGCGCCTCCTCTGATGCGGCATGCGCAAACG
GAACATTATTTTCTGGAGATCAGAATAGAACTCTAGACTATGCGCATGCA
TGCATGCACACATGACTCAGGCTGTCACGCACACAGAATTTGCAACAAGG
AAGGCAAAGGACGCGAGACACGTTGTAGTCTAGTTCTGCAATCAAAGGAT
AAAACCATGATTGGGCGGACCTCAACCTCAACCACCTCCCCCCCGCGCGC
TCCTGCCCACACGCATCAATATCAGACCTCTGCTGCAAGAGGCGCAGATC
GGAGCCTGCTTCGTGGCCATGGGCGTCGGCAAGCCTTCCAAGGTGACTAT
AATTTAGCTTTGAAAGATAAGCAGATAATCAAAAATGGAACCTAACCCAC
ATTGGAGACTTGTTTTTCTTATTGTAGGCTAGTAGGTCGCACTAAGGCCC
TGGCCCCCGACGAAGAGCCTCGGTTTCCGGTCAACAGAAGGTGAACGAGC
GGCTAAACAAGATGAAGCCAGAAGTTGAGGCCACTGAACCAAAGGGTGTA
CCTTGTACTTTTTCGGCCAAAATATGAGAGGTGCTTGGTATATAGGATAT
TTCAGTGCACACAAGAGTTGGACACCCTGTTTTTGGCAGGAAGAATACAA
GGTATACCTTGTTTTGGCCGCTGCCGATATATCTATGCGCACAGAAACTC
CAACGGCTTTCGCCGTGATTTTTTCGCGGGCGGGGCAGGGGTCCGACAGA
CATGATGACTGGCCGTCACCCTCTATCCACAACCCTAACGGCGACCCCGA
CGCCACTTCCGAGCCTAGCCACCCCCCCCCCCCAGTATGCCGTCTTCCTT
CGAGGCCCGAACCCCTTGTATTGTTTATCCGACAAAATATTGAGTGCTGT
CCTACTGACTGCTGTGCGCCGAGGCAGATCGCCTTGAGAGGAGAGGCTGA
GTGCTGCTGAAGGAGCCCGTCCAGGCTCAGTTTTTGTCTCAGTATCTATC
TACTGCAGGCGGAGAATCCGGAGTAATTATTACCAAATATTTTTAGCTGG
TCCAATCCTCGGCCAGTCCAATCCTCAAGTCTGCTGAACATGCATTTGCC
TGCACCACACCTAAAACGTTGTGCCAAACTTTTACTTGTACTGAGTATAG
ATAGTGTAAGCCCTCCATCACCACGCGCATCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCGCACCCCCCACAAAAAAAACACCCAAGGGGGGGGAAAAGA
GAAAAAAAAAAAAAANNNNNNNNNNAAAAACTTTGGCCAAACATTTACTT
TTAACGAGAGTAGAAAGTGTAAACCCCCCACCCCCCCCCCCCCCCCCCCC
CCCCCCCCCGTAGGAACGACTCTGACAACATGAACAGTCAGCCGTGATGG
TTGAAAAAGAACAGAAGAACGTTCCGAACGGCAGAAGGCTTGTTGTGCAA
AAATCCAGCTATGATAGATAGACCCTGCGCAGCAAAAGCATAAGATACAC
ACCCACCTTTTTTTGCAGGTACAGTAGTAACAGAATACATCCTCCAGTAT
GTACATACCTACATAGTAGATACCCCGGTTGGGTCGTCTAGCTAGTCGTA
GCGGAGGATGGGGGCCAGTGGGGCAGACGACAAATATGCCAGCAGTAATG
GGCGGAAAAAAAAGAAGAAAAAATGTAGATACATATATACCTCCTTCACA
ACTCCGCACGCACAAAAGAAAAACTAAATAAATCATCTAGTCTAGGTATG
TTATGCATACATACATGCAACAAACATCAAAAACGCAACGCAAACCCTAC
TTCTATGTACGAAGGTGACCCCCGAGGAGCTGGAAAAAGTGGACCTCCAA
ATCCCGACGGCGTTCGCGCAGGCATCCAAGAGCGCCGGCTGCGTGCGGCA
CATCTCCCTCCTGGGGTCGGTGGCCGCCGACGCGGACGCGAAACCGTCGA
TGCTGTCGAAGTGGGCCGGGACCACGGCGGGCGGGGGGCTGTACCTCGGC
ATCAAGGGCAGGGTGCGCGTGCCCAGCATTTGACTAAATAAATGGGAGGA
GTAGACTATAGCAATTAAGTGACCTGCCGTTTGCTGGTCGAGTCGTGCAC
GCGTGAGGAAAGGTTCTGGAGTGTATGTATGTATGTATGTATGAATGTAT
GTTTTTTTGTTTTTTTTCCTCCCATGATAGGCATATTCGTCGTCTGCCTG
CCCCACTCACTGGCCCTCGTACTCCACTACGACTAGCTAGATGACCCAAC
CGGGGTCACAGTATGTATGTATGTATTTATGTGTGCATGTACCTACCTGT
GTGTCCGTACATGATGGCCGGTCCTAGATTGGTGTTTATCGATTTGCCCG
CACGAAGCGGCGGAGATTTTTCGGCGCAAAGGAGGCCGTCAGAGTCGTCA
GAGGCAGAACATTCCATAAAGGTTTCTTGCGACAGCAGTAGTCCCCCTGG
ACCGGTATACGTTTTTTTTTTTTTTTAACTGTATCTACATATACATAGTC
CAGATACAAGTTTTCTTTGGAAAAAAATCACAATAATACAGTTAGTCCCC
TCTTGGAACGGCTTTTTCACAGACTGGAGTAGACTGCTGACATTTGTATG
CATTGATTAAAAATATGCGCTTGAGCTCTCGCTTCTGTGCGTACATATCT
GCAGCTTCTGTAGTATGCTTGCCCTTTGAGTGCGTTCGGGCCGAGCACCG
CCGTTACTACTGCTGAATATCAGTGGGGTGCAATGTCGGCAGGGTATGTA
CATGTGCACGCACGTGCCCCCCCGGGCAGGCAGCAAGGAGGGGACCGGGC
CCTCTGTATGCTTGCTCGGCGGCAAAACGTTCCACGTTCCGCTTTTTTTT
TTTTTTTCTTCACATTTATTTCCAGTGCTCGATGGGCTCCCTGTCACGAG
GACATCTTGCCAGAGTACTGGACCGTGGTCATACAGAAGGGTTCCTTTCC
CCAAGCCCCCCCCACTCCCCCCGTTTGCGGTGCTTGCCTCAGATTTTTGT
CGCGAGAAGGGTTCAGCCGTCCCTTTCCCTCGTCGACGGTGAGGTCGAAG
TTTGTGCACACACGCTAAGCGCTATCCAGCTCGCCGGACTAAAAGCCAAA
GATCCGTTTTGCCTCAGAACATTCCCAGCATATCTACCGTCCCCCTTCTA
TGGATACACCTTCTGGCCCTTTCAACAACAATCCCACACTGTCTAACACA
AACGCACAATCACCCCCCCCCTCTTACCACCACCACCACCACCACCATGC
CCCAAAACAGGTGGAGAATAACTTCGAGGCGGCCGGTCTAGAGTCCGCCG
CTTTTTTCCGGCCGGCCACCTTGGTCGGAAACACCAACACCCCGCCCATG
GCGGCGACCATGTCGAAGATGGTGTCGTGGATGCTGCCCCTTAAGTACAA
GGAAATAAACATCGAAGACGTGGGAGCGGCGGTGAGCGGGGGGTTACCTA
TCTCCTAGACCATAAAATAGTATATACGTGTATCTTTGCTCTCTGTGCTT
CCTTCCATGTTTTTGTTTTCCTTTTTTTTGGAGATAAAAAAGGATAACGG
GGTTTAACCTCCTTCCTGTCTGCGTGACCCCGGTTGACCCCCCCGCCAAA
AGATACCTGGACGGCACGTCGTATGTATGTAGACTACCGTAGATGACACA
AGATACCACACCCCCTGGACAGATTTTCGAAGCCCGATTCCTCCCCAGCA
GGAATAGTGCTACTGCCTAAAGGGGTGGCGTTGGAAAGATCTAGTCGAAA
GCTGTCCGAAAATGTGCTGATTGGTGCTAGCACCCTCTTCGTTACGGAGT
AATGGAGCTCTAAAGTTCGATCCAGGGGGTGTGGTATCTTGTGTCACCTA
CGGTATGTATCTATGTGAGAAAGCTGTATCGTAGGACCGCCTCCAAAAAG
AGAGTGTACGAACACAGTGGCGTCTGTCTGCTTGTCCCTGCTTCGTTACA
ACCGTAGTATCACCTACCTGCACCGCAGGAGGGGGGGGGGTCCAACACCC
CCCTCCTGTGCGATCCCGGTTGGATCGCCTGTTTAGCTAGTCGTAGTGGA
GGAAGTGGGCCAGTGGGGCAGACTACAAATATGTGCCAATAATGGAAGGA
GATATATATATGTAGAAGTATGTGTATAAATATATAGAGAGAGATCAACT
GAATCGAAGGGAACGATCCCGGAAATCGGCGGTGATCTCACAACAGACGG
TACACAATTTACCATGTGTAACAAAACAATATGTATATACGTAGTCTACA
CCCACAAACGTGTTTGGTCTCAACCTCCTGCTCATCCCCCCCACTTCTGT
GCCCCTTCCGAAACTGCCACCCACCCGCAGATGGTGAAGGTGGCTGTCAA
GAGCTTGGACGAGAAAGGCCCAAAAGTTGCCCGCTACGAGGGTGCTTCTC
TGTTCGGGTTGCTGGAGCCGAAGCCATGATTTTCTTGGCCGGCGCGGCGG
CTAGATAGATCAATATCGTAGTGGACGCGTGGGTGGGGAAAAGGCAGTAG
TAGTAGTAGTAGTAGTAGTCGGCCAAAGGAAAGCTGGTGTGTATGATCCT
GCCCATGATGCAGGTGCCCTTGCTGGAGGGGGGAGTGGAGTTAGTCGGTC
AAAGGAAAGCTGATGTGTACTGTATGATCCTCCCTGCCCATGGTGTACGT
GTTCTCGCTGGGAAGGAGCGGGGAGTGGAGGGGCGGGGAGCGCAGCAGCG
CCCCGTGTTTCGCGTCCGTCGGCGAGTAAATAAGGCCCTCCCAAGGCTGT
AAAAAACATGGGCAGGCGTTGTTTTCTTGTCTTGGGAGACACCCGTCCGT
GCTGTTGCTGCAGCCGCCCTCTCGGGAACAAGGTGCTGGCCGTCGGAAAG
GCGTTTCTTTCGTTCTGGTTTCGGCTTGATGCCTGTTACATAGGAATTCA
TAGAAGTTGGTCTCCGCTCGACTTGCGTGCCCCCCCCCTCCCCCCCGCGT
TCTATTTTTTTGTTTGTTTTTCTTGTCCCACAGCTTCACCCCAGAGCACT
GGCGCACCTCTTGTGGGCAACAACATGGCGGCGGGAAGCGCGTTTTTTTC
TATTGTCGGGTCTGTCATATTTTTTTAATTAATGCATAGATACAGATGTC
AGCAGGCTACGATACGTCCAGTCTAGTCTGTGGAAAAGTCGTTCCAGAGG
GATCTATCTGTTGTAGGCATAGATCTAAATACTACAGTAACCCCCCCTTT
TTTGCCCGTCCCAAGATATATATTTTTGTATATTTGTATTTTTTTTCAAC
CGTCGAGAGTTACAGGACGAATCCGCGCGCACACCCGCCTGCCTATACGT
TTTCGAGCTTTTGGGTCAGACCATGTGGATCTATCTGCCTGCGTTTTCGG
TATATCTATGTGTACGTGTGTCGGCGCCCCTTTTTTTGCGTTGTACTTTT
TCTTTTCTTTTTTGTGATGCCGATTCACACATCTAAATAGCCTCGCTGCT
GTGAAGACAGCTATTATTTAACTTGCTTGCTGCTGTTATTTTGTATTTCC
TGGATGTTGTCTGATGCGAACGAGAAAAATCTTGAAAATACCTTGGGCTT
CTTGTGGCGACATGTATCAAGCACGTCCAATGTGCTTGGTGAACACGTAT
GTACGTACATCCATAAACTTGTGTTTTTTTTTAGGGAATGGGGAGTTAGT
TGGTTGTGGCCCCGGTGTTGTTGAAAGACCGTCATCCCAATGTCTGTGGA
TGTGGACCAGCTGAAGAAGATGGCACCCAAAATATGGGAACCTGCGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1008:10506..16652-

>mRNA_L-elsbetiae_contig1008.121.1 ID=mRNA_L-elsbetiae_contig1008.121.1|Name=mRNA_L-elsbetiae_contig1008.121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1452bp|location=Sequence derived from alignment at L-elsbetiae_contig1008:10506..16652- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTAGGTTCTCAGCTGCGGTGCTCGGCGCCTCCGGCAATGTCGGCGG
TTGCATCGTGAACTCTCTGCTGGCCGAACCCAGGTGCACAACGATCCTGC
TCGTGAATCGACGCAAGCTGGAGAAGTATAACGACGAGCCCAGGATCACC
CAGCATGTGGTGGACATGGATAAGATTTCCACGGCGGCAGTATGGCTAGG
TTCTCAGCTGCGGTGCTCGGCGCCTCCGGCAATGTCGGCGGTTGCATCGT
GAACTCTCTGCTGGCCGAACCCAGGTGCACAACGATCCTGCTCGTGAATC
GACGCAAGCTGGAGAAGTATAACGACGAGCCCAGGATCACCCAGCATGTG
GTGGACATGGATAAGATTTCCACGGCGGCAGTACCTCTGCTGCAAGAGGC
GCAGATCGGAGCCTGCTTCGTGGCCATGGGCGTCGGCAAGCCTTCCAAGA
CCTCTGCTGCAAGAGGCGCAGATCGGAGCCTGCTTCGTGGCCATGGGCGT
CGGCAAGCCTTCCAAGGTGACCCCCGAGGAGCTGGAAAAAGTGGACCTCC
AAATCCCGACGGCGTTCGCGCAGGCATCCAAGAGCGCCGGCTGCGTGCGG
CACATCTCCCTCCTGGGGTCGGTGGCCGCCGACGCGGACGCGAAACCGTC
GATGCTGTCGAAGTGGGCCGGGACCACGGCGGGCGGGGGGCTGTACCTCG
GCATCAAGGGCAGGGTGACCCCCGAGGAGCTGGAAAAAGTGGACCTCCAA
ATCCCGACGGCGTTCGCGCAGGCATCCAAGAGCGCCGGCTGCGTGCGGCA
CATCTCCCTCCTGGGGTCGGTGGCCGCCGACGCGGACGCGAAACCGTCGA
TGCTGTCGAAGTGGGCCGGGACCACGGCGGGCGGGGGGCTGTACCTCGGC
ATCAAGGGCAGGGTGGAGAATAACTTCGAGGCGGCCGGTCTAGAGTCCGC
CGCTTTTTTCCGGCCGGCCACCTTGGTCGGAAACACCAACACCCCGCCCA
TGGCGGCGACCATGTCGAAGATGGTGTCGTGGATGCTGCCCCTTAAGTAC
AAGGAAATAAACATCGAAGACGTGGGAGCGGCGGTGGAGAATAACTTCGA
GGCGGCCGGTCTAGAGTCCGCCGCTTTTTTCCGGCCGGCCACCTTGGTCG
GAAACACCAACACCCCGCCCATGGCGGCGACCATGTCGAAGATGGTGTCG
TGGATGCTGCCCCTTAAGTACAAGGAAATAAACATCGAAGACGTGGGAGC
GGCGATGGTGAAGGTGGCTGTCAAGAGCTTGGACGAGAAAGGCCCAAAAG
TTGCCCGCTACGAGGGTGCTTCTCTGTTCGGGTTGCTGGAGCCGAAGCCA
TGAATGGTGAAGGTGGCTGTCAAGAGCTTGGACGAGAAAGGCCCAAAAGT
TGCCCGCTACGAGGGTGCTTCTCTGTTCGGGTTGCTGGAGCCGAAGCCAT
GA
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