mRNA_L-elsbetiae_contig10076.118.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10076.118.1
Unique NamemRNA_L-elsbetiae_contig10076.118.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A097IUF6_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUF6_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 2.190e-147
Identity = 209/227 (92.07%), Postives = 218/227 (96.04%), Query Frame = 1 
Query:    1 LQANGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            ++ NGEPDYTDVSKTENTRVSYPIYHIDNFEP+GMGGHPNSVIFLTCDAFG+LPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEP PNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGG+GVGKRMSLK TRACVHAVLDGTI   SFTPDPVFGFEVPAE+PGVP  VL+PR+AWSDK GYDATRTKLAGMFK+NFTKFVKPGVTDYTSYGPK
Sbjct:  339 IKENGEPDYTDVSKTENTRVSYPIYHIDNFEPTGMGGHPNSVIFLTCDAFGILPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPVPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGYGVGKRMSLKATRACVHAVLDGTIHNTSFTPDPVFGFEVPAEVPGVPDKVLDPRDAWSDKDGYDATRTKLAGMFKENFTKFVKPGVTDYTSYGPK 565
[Close]
BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: D7FYY3_ECTSI (Phosphoenolpyruvate carboxykinase (ATP) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYY3_ECTSI)

HSP 1 Score: 441 bits (1134), Expect = 1.400e-145
Identity = 208/227 (91.63%), Postives = 219/227 (96.48%), Query Frame = 1 
Query:    1 LQANGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            ++ NGEPDYTDVSKTENTRVSYPIYHIDN+EPSGMGGHPNSVIFLTCDAFG+LPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSA FGAAF+TLHPT YADLLQKKLAKHGTQC+LINTGWTGGG+GVGKRMS+K TRACV AVLDG+I K +FTPDPVFGFEVPAELPGVP+ VLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK
Sbjct:  350 IKDNGEPDYTDVSKTENTRVSYPIYHIDNYEPSGMGGHPNSVIFLTCDAFGILPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTMYADLLQKKLAKHGTQCYLINTGWTGGGYGVGKRMSIKATRACVDAVLDGSIGKTTFTPDPVFGFEVPAELPGVPAKVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 576
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BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A0A0V7J9_SACJA (Phosphoenolpyruvate carboxykinase (ATP) n=4 Tax=Laminariales TaxID=2886 RepID=A0A0A0V7J9_SACJA)

HSP 1 Score: 429 bits (1102), Expect = 9.380e-141
Identity = 198/227 (87.22%), Postives = 216/227 (95.15%), Query Frame = 1 
Query:    1 LQANGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            ++ NG+PDYTDVSKTENTRVSYPIYHIDN+EPSGMGGHPNS++FLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAF+TLHPT YADLLQKKL  HGTQCFLINTGWTGGG+GVGKRMS+K TRACV++VLDG+I+K  FT DPVFGFEVPA+LPGVPS VLNPR+AWSDK+ YD TRTKLAGMFKDNFTKFVKPGVT+YT+YGPK
Sbjct:  351 IKGNGDPDYTDVSKTENTRVSYPIYHIDNYEPSGMGGHPNSIVFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFLTLHPTAYADLLQKKLDTHGTQCFLINTGWTGGGYGVGKRMSIKATRACVNSVLDGSINKTKFTADPVFGFEVPADLPGVPSKVLNPRDAWSDKESYDTTRTKLAGMFKDNFTKFVKPGVTNYTAYGPK 577
[Close]
BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A097IUG4_PETFA (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A097IUG4_PETFA)

HSP 1 Score: 417 bits (1073), Expect = 1.710e-136
Identity = 195/227 (85.90%), Postives = 213/227 (93.83%), Query Frame = 1 
Query:    1 LQANGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            ++ NGEPDYTD S+TENTRVSYPIYHIDN EPSGMGGHPNS+IFLTCDAFGVLPPVSRLS GQAMYH+LSGYTAKVAGTERGVTEPTPNFSA FGAAF+TLHPT YADLLQ KL +HGTQCFLINTGWTGGG+GVGKRMS+K TRACV+AVLDG+I+KASFTPDPVFGF+VP ELPGVP+ VL PR+AWSDKK YD TRTKLAGMFKDN+TKFVKPGVT+YTS+GPK
Sbjct:  344 IKENGEPDYTDTSRTENTRVSYPIYHIDNHEPSGMGGHPNSIIFLTCDAFGVLPPVSRLSPGQAMYHYLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTLYADLLQHKLDRHGTQCFLINTGWTGGGYGVGKRMSIKATRACVNAVLDGSINKASFTPDPVFGFDVPTELPGVPTKVLIPRDAWSDKKSYDTTRTKLAGMFKDNYTKFVKPGVTNYTSFGPK 570
[Close]
BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A097IUF8_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUF8_9PHAE)

HSP 1 Score: 417 bits (1072), Expect = 2.500e-136
Identity = 196/227 (86.34%), Postives = 214/227 (94.27%), Query Frame = 1 
Query:    1 LQANGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            ++ NGEPDYTDVSKTENTRVSYPIYHI+N EP+GMGGHPNS++FLTCDAFGVLPPVSRLS GQAMYH+LSGYTAKVAGTERGVTEPTPNFSA FGAAF+TLHPT+YADLLQKKL +HGTQCFLINTGWTGGG+GVGKRMSLK TRACV AVLDG+I+KASF  DPVFGFEVP ELPGV + VLNPR+AWSDK+ YDATRT+LAGMFKDNFTKFVKPGVTDYTS+GPK
Sbjct:  345 VKENGEPDYTDVSKTENTRVSYPIYHIENHEPTGMGGHPNSIVFLTCDAFGVLPPVSRLSPGQAMYHYLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTEYADLLQKKLDRHGTQCFLINTGWTGGGYGVGKRMSLKETRACVDAVLDGSINKASFHADPVFGFEVPTELPGVTTKVLNPRDAWSDKESYDATRTRLAGMFKDNFTKFVKPGVTDYTSFGPK 571
[Close]
BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A097IUF2_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUF2_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 7.050e-136
Identity = 196/227 (86.34%), Postives = 210/227 (92.51%), Query Frame = 1 
Query:    1 LQANGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            ++ NGEPDY DVS+TENTRVSYPIYHIDN+EPSGMGGHPNS+IFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSA FGAAF+TLHPT YADLLQKKLA HGTQCFLINTGWTGGG+GVGKRMS+K TRACV +VLDG+I+   F  D VFGFEVP ELPGVPS VLNPREAWSDK GYDAT+TKLAGMFK NFTKFVKPGVTDYT++GPK
Sbjct:  345 IKDNGEPDYADVSRTENTRVSYPIYHIDNYEPSGMGGHPNSIIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTMYADLLQKKLATHGTQCFLINTGWTGGGYGVGKRMSIKATRACVDSVLDGSINNTKFFSDKVFGFEVPTELPGVPSKVLNPREAWSDKAGYDATQTKLAGMFKQNFTKFVKPGVTDYTAFGPK 571
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BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A097IUE6_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IUE6_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 8.590e-133
Identity = 192/227 (84.58%), Postives = 209/227 (92.07%), Query Frame = 1 
Query:    1 LQANGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            ++++GEPDYTD S+TENTRVSYPIYHIDN EPSGMGGHP S+IFLTCDAFGVLPPVSRLS GQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAF+TLHPTKYADLLQKKL KH TQCFLINTGWTGGG+GVGKRMS+K TRACV+AVLDG+I+KA+FT D VFGFEVPAELP VP+ VLNPR AWSDK+ YD TR KLAGMFKDNF KF+K G TDY+SYGPK
Sbjct:  340 IKSDGEPDYTDTSRTENTRVSYPIYHIDNHEPSGMGGHPTSIIFLTCDAFGVLPPVSRLSGGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFLTLHPTKYADLLQKKLDKHQTQCFLINTGWTGGGYGVGKRMSIKATRACVNAVLDGSINKANFTNDEVFGFEVPAELPEVPAQVLNPRAAWSDKEKYDNTRIKLAGMFKDNFKKFIKEGATDYSSYGPK 566
[Close]
BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A097IUC3_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=7 Tax=Sargassum TaxID=3015 RepID=A0A097IUC3_9PHAE)

HSP 1 Score: 391 bits (1005), Expect = 5.610e-126
Identity = 185/227 (81.50%), Postives = 201/227 (88.55%), Query Frame = 1 
Query:    1 LQANGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            ++ NGEPDY DVS+TENTRVSYPIYHIDN+EPSGMG HP S++FLTCDA+GVLPPVSRLS GQAMYHFLSGYTAKVAGTERGVTEPTPNFSA FGAAF+TLHPT YADLLQ+KL KHGTQCFLINTGWTGGG+GVGKRMS+K TRACV AVLDG+I+K  FT +PVFGFEVP ELP VPS VLNPREAWSDK  YDATR KLA MFK+NFTKFVKPG+T      PK
Sbjct:  368 IKKNGEPDYADVSRTENTRVSYPIYHIDNYEPSGMGDHPKSIVFLTCDAYGVLPPVSRLSPGQAMYHFLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTVYADLLQEKLDKHGTQCFLINTGWTGGGYGVGKRMSIKATRACVDAVLDGSINKTQFTKEPVFGFEVPQELPNVPSKVLNPREAWSDKASYDATRVKLADMFKNNFTKFVKPGMTXXXXXXPK 594
[Close]
BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A835YNF1_9STRA (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNF1_9STRA)

HSP 1 Score: 358 bits (918), Expect = 1.190e-113
Identity = 162/224 (72.32%), Postives = 194/224 (86.61%), Query Frame = 1 
Query:   10 NGEPDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            NG+ DY D + TEN RVSYPIYHI N+EP+GMGGHP +VIFLTCDAFGVLPPVSRLS GQAMYHFLSGYTAKVAGTERG+TEP PNFSACFGAAFMTLHPTKYADLL++KL KH T+C+L+NTGWTGG +GVG+RMS+K TRAC+ A+LDG+ID A    DPVFGF++P +L  VP++VL+P+++W DK  Y+A R+KLAGMFK N+ +F KPG+TDY S+GPK
Sbjct:  318 NGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 541
[Close]
BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Match: A0A225V2I6_9STRA (Phosphoenolpyruvate carboxykinase (ATP) (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V2I6_9STRA)

HSP 1 Score: 344 bits (882), Expect = 8.720e-113
Identity = 159/221 (71.95%), Postives = 185/221 (83.71%), Query Frame = 1 
Query:   19 PDYTDVSKTENTRVSYPIYHIDNFEPSGMGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHGVGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 681
            PD+ + SKTEN RVSYPIYHI NFEP+  GGHP++V+FLTCDA+GVLPPVS+LS GQAMYHFLSGYTAKVAGTERGVTEPT  FSACFGAAF+ LHPTKYADLLQKKL K+ T  +L+NTGWT GG+GVG+RMS+K TRAC+ A+LDG+I  + F+ DP FGF VP +L  +P NVLNPREAWSDK  YDAT  KLAGMFKDN+ K+V   VTDY+ +GPK
Sbjct:    1 PDFYNTSKTENGRVSYPIYHIPNFEPTSSGGHPSNVVFLTCDAYGVLPPVSKLSDGQAMYHFLSGYTAKVAGTERGVTEPTATFSACFGAAFLPLHPTKYADLLQKKLQKYNTSVYLVNTGWTAGGYGVGQRMSIKDTRACIDAILDGSIKNSEFSEDPNFGFAVPKKLGDIPENVLNPREAWSDKAAYDATAKKLAGMFKDNYKKYVSADVTDYSKFGPK 221
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10076.118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A097IUF6_9PHAE2.190e-14792.07Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Pu... [more]
D7FYY3_ECTSI1.400e-14591.63Phosphoenolpyruvate carboxykinase (ATP) n=2 Tax=Ec... [more]
A0A0A0V7J9_SACJA9.380e-14187.22Phosphoenolpyruvate carboxykinase (ATP) n=4 Tax=La... [more]
A0A097IUG4_PETFA1.710e-13685.90Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Pe... [more]
A0A097IUF8_9PHAE2.500e-13686.34Phosphoenolpyruvate carboxykinase (ATP) n=3 Tax=Sc... [more]
A0A097IUF2_9PHAE7.050e-13686.34Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=De... [more]
A0A097IUE6_9PHAE8.590e-13384.58Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Is... [more]
A0A097IUC3_9PHAE5.610e-12681.50Phosphoenolpyruvate carboxykinase (ATP) n=7 Tax=Sa... [more]
A0A835YNF1_9STRA1.190e-11372.32Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Tr... [more]
A0A225V2I6_9STRA8.720e-11371.95Phosphoenolpyruvate carboxykinase (ATP) (Fragment)... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10076contigL-elsbetiae_contig10076:2583..7205 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.0
Seed ortholog evalue1.3e-102
Seed eggNOG ortholog2880.D7FYY3
Preferred namePCK1
KEGG rclassRC00002,RC02741
KEGG koko:K01610
KEGG ReactionR00341
KEGG Pathwayko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00003,M00170
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006083,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015976,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019318,GO:0019319,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576
EggNOG free text desc.phosphoenolpyruvate carboxykinase (ATP) activity
EggNOG OGs2QQI5@2759,COG1866@1
EC4.1.1.49
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size1723
Cds size582
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815239.7420897-UTR-L-elsbetiae_contig10076:2582..36211622815239.7420897-UTR-L-elsbetiae_contig10076:2582..3621Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10076 2583..3621 -
1691682789.7131586-UTR-L-elsbetiae_contig10076:2582..36211691682789.7131586-UTR-L-elsbetiae_contig10076:2582..3621Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10076 2583..3621 -
1622815239.814881-UTR-L-elsbetiae_contig10076:7103..72051622815239.814881-UTR-L-elsbetiae_contig10076:7103..7205Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10076 7104..7205 -
1691682789.7774665-UTR-L-elsbetiae_contig10076:7103..72051691682789.7774665-UTR-L-elsbetiae_contig10076:7103..7205Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10076 7104..7205 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815239.7523563-CDS-L-elsbetiae_contig10076:3621..36601622815239.7523563-CDS-L-elsbetiae_contig10076:3621..3660Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 3622..3660 -
1691682789.7264078-CDS-L-elsbetiae_contig10076:3621..36601691682789.7264078-CDS-L-elsbetiae_contig10076:3621..3660Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 3622..3660 -
1622815239.7644753-CDS-L-elsbetiae_contig10076:4258..44081622815239.7644753-CDS-L-elsbetiae_contig10076:4258..4408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 4259..4408 -
1691682789.7351532-CDS-L-elsbetiae_contig10076:4258..44081691682789.7351532-CDS-L-elsbetiae_contig10076:4258..4408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 4259..4408 -
1622815239.7747686-CDS-L-elsbetiae_contig10076:5399..55801622815239.7747686-CDS-L-elsbetiae_contig10076:5399..5580Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 5400..5580 -
1691682789.7447143-CDS-L-elsbetiae_contig10076:5399..55801691682789.7447143-CDS-L-elsbetiae_contig10076:5399..5580Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 5400..5580 -
1622815239.7851362-CDS-L-elsbetiae_contig10076:6364..64891622815239.7851362-CDS-L-elsbetiae_contig10076:6364..6489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 6365..6489 -
1691682789.754255-CDS-L-elsbetiae_contig10076:6364..64891691682789.754255-CDS-L-elsbetiae_contig10076:6364..6489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 6365..6489 -
1622815239.7993164-CDS-L-elsbetiae_contig10076:7016..71031622815239.7993164-CDS-L-elsbetiae_contig10076:7016..7103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 7017..7103 -
1691682789.7636168-CDS-L-elsbetiae_contig10076:7016..71031691682789.7636168-CDS-L-elsbetiae_contig10076:7016..7103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10076 7017..7103 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10076.118.1prot_L-elsbetiae_contig10076.118.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10076 3622..7103 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10076.118.1

>prot_L-elsbetiae_contig10076.118.1 ID=prot_L-elsbetiae_contig10076.118.1|Name=mRNA_L-elsbetiae_contig10076.118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MGGHPNSVIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVT
EPTPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGHG
VGKRMSLKGTRACVHAVLDGTIDKASFTPDPVFGFEVPAELPGVPSNVLN
PREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK*
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mRNA from alignment at L-elsbetiae_contig10076:2583..7205-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10076.118.1 ID=mRNA_L-elsbetiae_contig10076.118.1|Name=mRNA_L-elsbetiae_contig10076.118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4623bp|location=Sequence derived from alignment at L-elsbetiae_contig10076:2583..7205- (Laminarionema elsbetiae ELsaHSoW15)
CTCCAGGCAAACGGTGAGCCCGACTACACCGACGTGTCCAAGACGGAGAA
CACCCGCGTGTCGTACCCCATCTACCACATCGACAACTTCGAGCCCTCGG
GCATGGGCGGGCACCCGAACAGCGTCATCTTCCTCACGTGCGACGCGTTC
GGCGTCCTCCCCCCGGTGTCGAGACTCAGCGCGGGACAGGTGACTTCACG
AAATAGACGATTTATCCTCTTCTTTTTTTTGTTTTCCGTCGGTGTCTTTT
CCGTCTCTTCTCTGTCTTTGGCTTGGGCACCCGACCTGCTCGTTGGCCAT
CCGACCGCAGCGCCTGCTGTTGTTGGGGTTGTGATACTGTTGTGTACTAG
CCAAGGGATGATTTTTTTCAGGTTGCTGGCAGACGCCCCCCCCCCCCCGG
CAAAAGATGGGGCACGCTCTTTCTTGTGTCGTTGAGCCAAGTTTCAGCTG
AAATTCATTTTTTTGATTGCGAGAGAGGCCAGTCAACTAACCCACACGAA
CGAGAACTAGAGGCCAACCAACTATAACCCACACGAACGAGAACTATATA
TATATATTTTTTTTGCGTTCGGCGCTGTTAGCCTTATCCTCAAGACGCGA
TGTACCACTTCCTGAGTTTTTTTTTTTACGTTGGGCGCTGTTAACCTTCC
CCTCAGGCGATGTACCACTTCCTGAGTTTTTTTTTTTACGTTGGGCGCTG
TTAACCTTCCCCTCAGGCGATGTACCACTTCCTTAGCGGCTACACGGCGA
AGGTCGCCGGCACGGAGCGCGGCGTGACGGAACCGACCCCCAACTTCTCG
GCCTGCTTCGGGGCGGCGTTTATGACGCTGCACCCCACCAAGTGAGTTTC
TTGCAGTAGTCTACGCGGGGTTTTTGTCTTAAGCTAACATATGGGATAAA
GTATGGAAACCGTTTGGGGGGGTCGGTGGTTGGGGTTAGGGTTAGGGTTA
GAGTTAGTAGTATAAAATTAATTTTTGCGTAGCCGTTTCTTGGCAACTTT
TGTCTTCACCAGGTGCACTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCACGAGCGATCGTTTTACACGCCGGCTCGCCTATCTTGCGTTA
ATAGGGTGTGGTGGAGCACACACTTCCTGTGCACCACCCCCCCCCCCCCC
CCCCCCCCCCCGCNNNNNNNNNNCGGGAGGGGCGCGCGTTGTTCCTCCCG
GCTCCCCTTATGTCGCTTGATAGGGGGGGTGGGCGCCCGCACCTCCCGTG
CCCCCCCCCCCCCCCCCCCCCGCCATTTATCGACGCATTCCACGCATTTT
ACCCCCTCGTGTGTGAAATACAGACAACTACAAGTGAAGCACACACCCCC
CGGCCATTTATCAACGCATTCGACGCATTTTACCCCCCCGTGTGTGAAAT
AGACAACTAAAAAGTGAAATGTAAGTATATATCATGTTGTCTTCACATTA
AAAACCGTTCCGATCTCTCCATCCAGTACCTCTCAAATGTCCGTGCGGTA
CTATAATCCAACACTTAAGGTCTGACAGCCATAATGACACATCCGTACCA
CACGCGTTTAGAAAGGCATCCGTCACACCTCGGCCGCTTCGCGTCAATCC
TACTACTGTCTGCACTCCTCAAAAGGTACGCCGACCTGCTCCAGAAGAAG
CTGGCCAAGCACGGCACGCAGTGCTTCCTCATCAACACCGGCTGGACCGG
AGGCGGCCACGGAGTCGGCAAGCGCATGTCCCTGAAGGGCACCAGGGCGT
GCGTGCACGCGGTGCTGGACGGCACCATCGACAAGGCCAGCTTCACCCCG
GACCCGGTGCGTGCGTGCGTGCGTGCCTTGTTCTGGACCCCCTTTGCGAA
GAATTCCTGTCCATATACATATATGGAAAATAATGGTTAGTCTACGCAGG
TTTTTGTTCAGCGAAATATACGGGATAAAAGTATGGAATCGGGGAATGTT
TGTGGGGCCAGTGGTTAGGGTTAGGGTTAGGGTTAGAGTTGCGGAACCCC
TAATACTCTATTTCACATATGTACAAACCAATATTCCCCGTTTTTTCTCG
CGAAGGCAGTCCAAAATACTAGACGGGAGTTCCGTAACAACCCCAACACC
CAACCCCAAACCGACCCCCCCCCACTAGCCGTTTCCATGCTTTATTTATA
TCCCATATGATTTCTTCCAGTAAAACCTGCGAAGGATGCTGCCTGCTTGT
TCTCGGTGGGAGGAAAAAGTCGACTATGCCGGCCGGCCTGTCTCTTGTGG
CGTGGCGTGGAGGAATGTCTCTTGTGGCGTGGAGGACTGTCTCTTGTGGC
TTGGAGGACTGTCTCTTGTGGTGTGGAGGACTTGACTTTACGGGGTGGGC
GTGGGCGCGCGCGCGCGCGTGCATGCGTGCGCGTGCGTGGGAGGCTATTG
TAACGATCAGGCTCTGCTGCGAGCGGTGCTGCGAGCGGTGCCGCGTTTTA
CGGCGAGCGCTGCGAAATGCGAAAGGTGCCAAGACAGGGCGGCATCGAAT
CGACGAGAACAGGGTTGAGCGCGAGCCAGAGAAGCGCACACGCAACACTC
TTTTTCTGTTAGCTTTTGTGTGTGTATGTGTGCTTGTTTCGGCGGCCGCA
GCTCTCGCCTCCCTCGACGGACGGACAGAGAGCTTGCTTGTGCTTCCCCA
GGGGGGCACGTGAAGATATCGAGTCATAGTTCTAGAGGGACCCCGGGGTT
TCGGGGGGACCCCTCTCGTGGCGACGGTATCATCATTGAGCAGTAGTCCC
GACCTTTTCGTTCCGGCCGTCTCTAAACCCATGTTTGTGGCGCCCAGGTG
TTTGGGTTTGAGGTGCCGGCGGAGCTGCCCGGCGTGCCGAGCAACGTGCT
GAACCCCCGCGAGGCGTGGAGCGACAAGAAGGGCTACGACGCCACCAGGA
CCAAGCTGGCCGGAATGTTCAAGGACAACTTCACCAAGTTCGTGAAGGTG
CGCTTCCCTGCGTGTTTTTGTTGTGTTGTTGTTATCGGTGGGGGCCTCCG
TACTGTATAGGAGTATATATATATATATTTTTTTTTCCCACCCATGCCAT
GTCCACCCGTACGTGGGGGGCGGTGTGTGTCTGGGCGAGGGAGTGAGCAT
GGGGTCCCTGCGATGGGATCCCTGCGGTTTGGTTTTGTTTCTCGCTCTAT
TGTTGAAGAAGCAGAGGGTGGAACATTATGACCACCCTGCCTGCTGCTGG
CGGTGGTGCGGTGGTCTTCGCTTGTTGTCGGGCTCGGTTTGTGACGCTAC
ACGAGGAGGCTGAGCACGCGTCTCTCGGCTAGAGTCTCGCCGCGCGTTCG
CGGGATGCCAACAGGTTGAATAAAGCCGGGCGCAAACCTCAGCCGCGTGC
TCGTGGTTAAGAAGGACGCACGATTTTACCGGAATAGGGTGACGCGTTTG
CTGACCCCGCCCCCCCCCCGCCCCGCCCCTCCGCCGCCCTCCGCCCTCCG
CCCCCCCCTCTCGCCCCTCCTTCCTCCCCATGTTTTGGAAACTCCTCTTT
CGCGTGGTCTACCTCGCCGCAAACCCGTCCCTCGCCGTGGTGCAGCCGGG
CGTGACCGACTACACGTCGTACGGCCCGAAGTAAAACACAAGGGCAACGC
ACTTGTACTCCAAGGAGAAGGGAGGCATGCTATACGTACAGCGCTCGGAC
GCTGAAGTTAGGGACATCAACACTGCATGCATGCCTGTGCTGTTTGGGAT
GGCGTGCGCTTTGACGTTCACTTTGTATTAACTTTGTGACTCTCCAGCTT
GATTTTGGATCAGATAGGGGCTATATAGGAGGGTGCCGGGCGGTGGCTTT
TGTGGGGGAGGCATAGATGAGGGTGTGACAGGTACCCCAGGGGGGGAAGA
TGTATAGTTGGATACTTTTCAGCTAAGATAAAGGGTCAAGTTATAGGGGA
GGATACCCCCTTGTAGCCCTCTTTAGTTGTTCTTTGGACAGGGGCGGAGG
GCTGAGCAGTTCCCCCGGAGTCTGTTCTCGGTAAAGGCCGGCAAAGAGAC
AAGATAGAGCGGGAGGGGGAAATCCCTTGCTTGCCTTCTCCTCAATGTCC
GTCTCGTAGGGGGGCTAAGTTTTGTTGTGGTGTGATATTTTACACATGGG
TTGGCGGAAGGGATAGATATAGTAAACTCGGCGCCGTTCTCTCGGTTGTT
GTGCTTGTGTTGTTCATCATTTGTATTTTTGAGAGACGGAAAATTGTGTC
GTCATTCGTGCGTGCGTGATCACCGTGCCCCCCACCAACGTCCGAGGTGG
TGCTGCGGGATTGCGAACAGATGCTCCATTGTTGGGCGTCGTGAAAGGAG
GCATGTTTTTGTATTTTCGAAGCGCTTGTTGTCCTTATGTGTGAACGAAG
AAACGGCGGGCGTTTATATTGCTGACCTAGAGGTTAGCAGCAAGCTTTCT
TATGTATATGCGATTCTCTTGCCGCAACGAACGTTGATTTTTAGTGTTTT
TTTTCACGTGTTGGAGGATCTTTATCACGTCACGACGAAGCATAGAGCTA
GCACTGTCTGTTATCTCTATATCCCGGCTCCTCCTCGGAGCTTGCTTTAT
CAACGAACTTGAAGAATATTTGAAACATCTGGTACATATATTTGAAACAT
CTGGTACATATACTGGGAAGTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10076:2583..7205-

>mRNA_L-elsbetiae_contig10076.118.1 ID=mRNA_L-elsbetiae_contig10076.118.1|Name=mRNA_L-elsbetiae_contig10076.118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1164bp|location=Sequence derived from alignment at L-elsbetiae_contig10076:2583..7205- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGGGCACCCGAACAGCGTCATCTTCCTCACGTGCGACGCGTTCGG
CGTCCTCCCCCCGGTGTCGAGACTCAGCGCGGGACAGATGGGCGGGCACC
CGAACAGCGTCATCTTCCTCACGTGCGACGCGTTCGGCGTCCTCCCCCCG
GTGTCGAGACTCAGCGCGGGACAGGCGATGTACCACTTCCTTAGCGGCTA
CACGGCGAAGGTCGCCGGCACGGAGCGCGGCGTGACGGAACCGACCCCCA
ACTTCTCGGCCTGCTTCGGGGCGGCGTTTATGACGCTGCACCCCACCAAG
CGATGTACCACTTCCTTAGCGGCTACACGGCGAAGGTCGCCGGCACGGAG
CGCGGCGTGACGGAACCGACCCCCAACTTCTCGGCCTGCTTCGGGGCGGC
GTTTATGACGCTGCACCCCACCAAGTACGCCGACCTGCTCCAGAAGAAGC
TGGCCAAGCACGGCACGCAGTGCTTCCTCATCAACACCGGCTGGACCGGA
GGCGGCCACGGAGTCGGCAAGCGCATGTCCCTGAAGGGCACCAGGGCGTG
CGTGCACGCGGTGCTGGACGGCACCATCGACAAGGCCAGCTTCACCCCGG
ACCCGGTACGCCGACCTGCTCCAGAAGAAGCTGGCCAAGCACGGCACGCA
GTGCTTCCTCATCAACACCGGCTGGACCGGAGGCGGCCACGGAGTCGGCA
AGCGCATGTCCCTGAAGGGCACCAGGGCGTGCGTGCACGCGGTGCTGGAC
GGCACCATCGACAAGGCCAGCTTCACCCCGGACCCGGTGTTTGGGTTTGA
GGTGCCGGCGGAGCTGCCCGGCGTGCCGAGCAACGTGCTGAACCCCCGCG
AGGCGTGGAGCGACAAGAAGGGCTACGACGCCACCAGGACCAAGCTGGCC
GGAATGTTCAAGGACAACTTCACCAAGTTCGTGAAGGTGTTTGGGTTTGA
GGTGCCGGCGGAGCTGCCCGGCGTGCCGAGCAACGTGCTGAACCCCCGCG
AGGCGTGGAGCGACAAGAAGGGCTACGACGCCACCAGGACCAAGCTGGCC
GGAATGTTCAAGGACAACTTCACCAAGTTCGTGAAGCCGGGCGTGACCGA
CTACACGTCGTACGGCCCGAAGTAACCGGGCGTGACCGACTACACGTCGT
ACGGCCCGAAGTAA
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