mRNA_L-elsbetiae_contig10064.109.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: D7FYG8_ECTSI (SGF29 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYG8_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.080e-80 Identity = 124/129 (96.12%), Postives = 128/129 (99.22%), Query Frame = 3 Query: 30 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKMKARGDSQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSFEQ 416 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLS+ELEALHNKFLGQAREKMKARGDSQE+DPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIA+QTHQMVADRLKRLT+DL SFEQ Sbjct: 1 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIADQTHQMVADRLKRLTTDLASFEQ 129
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: A0A835ZFQ3_9STRA (SGF29 tudor-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ3_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.780e-18 Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 69 VDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLG-----------QAREKMKARGD-SQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSFEQ 416 ++DF+D ++T+PNE++R+ L+R+LDK S EL F+ +A+ K++ R D ++V+P LV+DP +A+I + ++ +QI DEKVAIA+Q H VA L+RLT DL ++ Sbjct: 4 IEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDE 131
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: A0A7S1G8T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8T7_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.340e-16 Identity = 39/118 (33.05%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 63 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKMKARGDSQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSFEQ 416 T+++D+++ +T++P+EI+RN +LMR LD D+ + E++ L ++ +AR +++ + D + + + +D +AE+ + Q DEKVAIA+QT+++V + ++RL +L SFE+ Sbjct: 3 TYLEDYVEKITSLPDEIKRNFELMRELDSDSQSMLQEIKQLQQAYVQKARRRVQ-KADGRAGNLAEVAEDKEALAELKAKREVATQKADEKVAIADQTYELVDNHIRRLDIELKSFEE 119
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: A0A8K1CVS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVS9_PYTOL) HSP 1 Score: 79.7 bits (195), Expect = 3.620e-15 Identity = 41/122 (33.61%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 63 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKMKAR------GDSQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSF 410 T+++D+++ M +P+E++RN LMR LDK ++ L EL+A H ++L AR+K+ R G+ E + + LV+ + ++ R Q +DEK+AIA Q++ +V ++RL DL ++ Sbjct: 3 TYLEDYLESMYMLPSEVKRNFDLMRELDKTSYPLIEELQAYHKEYLVSARKKVVERCANTELGEPDETELRELVETDEALEKLREKHQRVIQKLDEKIAIAAQSYDLVDHHIRRLDQDLEAY 124
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: A0A0P1AIT3_PLAHL (Inhibitor of growth protein 4 isoform x2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIT3_PLAHL) HSP 1 Score: 77.0 bits (188), Expect = 7.290e-15 Identity = 40/122 (32.79%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 63 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKMKAR------GDSQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSF 410 T+V+D+++ M +P+EI+RN LMR LDK ++ L EL+ + +L AR+K+ AR G++ E + + +++ ++ ++ + Q +DEK+AIA Q++ +V ++RL DL S+ Sbjct: 3 TYVEDYLESMYMLPSEIKRNFDLMRELDKTSYPLLEELKTVQKAYLTSARQKVLARCADTTKGEATEKELREIIESDGIVRQLYEKHASVVQKLDEKIAIAAQSYDIVDHHIRRLDRDLESY 124
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: A0A5D6XTF6_9STRA (Inhibitor of growth protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTF6_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 5.450e-14 Identity = 42/122 (34.43%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 63 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKMKAR-GDSQEVDP-----KVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSF 410 T+++D+++ M +P+EI+RN LMR LDK ++ L EL++ H FL AR+K+ R D++ +P + LV + + + R Q +DEK+AIA Q++ +V ++RL DL ++ Sbjct: 3 TYLEDYLESMYMLPSEIKRNFDLMRELDKTSYPLIEELKSAHKAFLLSARKKVAERCADTERSEPDEQELRALVGADAALERLHTTHQRVVQKLDEKIAIAAQSYDVVDHHIRRLDQDLEAY 124
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: K3XAJ5_GLOUD (Inhibitor of growth protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAJ5_GLOUD) HSP 1 Score: 74.3 bits (181), Expect = 3.270e-13 Identity = 41/122 (33.61%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 63 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKM------KARGDSQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSF 410 T+++D+++ M +P+EI+RN LMR LDK ++ L EL+ H +L AR K+ K +G+ E + + LV+ + + + R Q +DEK+AIA Q++ +V ++RL DL ++ Sbjct: 3 TYLEDYLESMYMLPSEIKRNFDLMRELDKTSYPLIEELKNAHKAYLIAARRKVMERCADKEKGEPDEQELRDLVETDATLELLKAKHQRVIQKLDEKIAIAAQSYDIVDHHIRRLDQDLDAY 124
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: A0A484E5X9_BRELC (Inhibitor of growth protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5X9_BRELC) HSP 1 Score: 74.3 bits (181), Expect = 3.370e-13 Identity = 41/122 (33.61%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 63 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKMKAR------GDSQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSF 410 T+V+D+++ M +P+EI+RN LMR LDK ++ L EL +L AR+K+ AR G++ E + + L+ ++ ++ + Q +DEK+AIA Q++ +V ++RL DL S+ Sbjct: 3 TYVEDYLESMYMLPSEIKRNFDLMRELDKTSYPLLEELMTAQKAYLTSARQKVLARCADPTKGEATEQELRELIKADAMVQQLRERHALVVQKLDEKIAIAAQSYDIVDHHIRRLDRDLESY 124
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: A0A225WVL3_9STRA (Inhibitor of growth protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVL3_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 4.780e-13 Identity = 41/122 (33.61%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 63 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKMKAR------GDSQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSF 410 T+V+D ++ M +P+EI+RN LMR LDK ++ L EL+ +L AR+K+ AR G++ E + + L++ ++ + + Q +DEK+AIA Q++ +V ++RL DL S+ Sbjct: 3 TYVEDCLENMYLLPSEIKRNFDLMRELDKTSYPLLEELKTTQKAYLTSARQKVLARCADATKGEATEQELRELIEADEMVQTLQEQHALVVQKLDEKIAIAAQSYDIVDRHIRRLDRDLESY 124
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Match: A0A6A3HYH1_9STRA (Inhibitor of growth protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HYH1_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 9.180e-13 Identity = 39/122 (31.97%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 63 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEALHNKFLGQAREKMKAR------GDSQEVDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIAEQTHQMVADRLKRLTSDLVSF 410 T+V+D+++ M +P+E++RN LMR LDK ++ L EL+ +L +AR+K+ R G++ E + + L++ + + + Q +DEK+AIA Q++ +V ++RL DL S+ Sbjct: 3 TYVEDYLESMYLLPSELKRNFDLMRELDKTSYPLLEELKTTQKAYLTRARQKVLDRCADTTKGEATEQELRALIEADDAVKTLQDKHALVVQKLDEKIAIAAQSYDIVDHHIRRLDRDLESY 124 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10064.109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10064.109.1 >prot_L-elsbetiae_contig10064.109.1 ID=prot_L-elsbetiae_contig10064.109.1|Name=mRNA_L-elsbetiae_contig10064.109.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSTELEback to top mRNA from alignment at L-elsbetiae_contig10064:134..4553- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10064.109.1 ID=mRNA_L-elsbetiae_contig10064.109.1|Name=mRNA_L-elsbetiae_contig10064.109.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4420bp|location=Sequence derived from alignment at L-elsbetiae_contig10064:134..4553- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10064:134..4553- >mRNA_L-elsbetiae_contig10064.109.1 ID=mRNA_L-elsbetiae_contig10064.109.1|Name=mRNA_L-elsbetiae_contig10064.109.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=774bp|location=Sequence derived from alignment at L-elsbetiae_contig10064:134..4553- (Laminarionema elsbetiae ELsaHSoW15)back to top |