mRNA_L-elsbetiae_contig11204.1086.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: D7FXT0_ECTSI (COX19 homolog, cytochrome c oxidase assembly protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXT0_ECTSI) HSP 1 Score: 170 bits (430), Expect = 5.170e-48 Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGGGWLSRWKKKD 270 ++FLACL++HD DHLPCK+LSK+YLACRMDRNLMA+EEFEKLGF+TEEEY RIR QAPVKEGTKEGEGFVGGTHIRQRGGGWLS WKKKD Sbjct: 31 KAFLACLKKHDSDHLPCKSLSKLYLACRMDRNLMAREEFEKLGFSTEEEYERIRRQAPVKEGTKEGEGFVGGTHIRQRGGGWLSNWKKKD 120
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A482S1S0_9ARCH (Coiled-coil-helix-coiled-coil-helix domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1S0_9ARCH) HSP 1 Score: 74.7 bits (182), Expect = 1.140e-12 Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGGGWLSRWKKK 267 ++FL CL+EHD DH PCK SK +L CRM+RNLMA ++ + LGF+ + Y R P E KE +GFV G +R W W K Sbjct: 32 KAFLECLKEHDNDHYPCKDFSKAFLKCRMERNLMAPDDLDNLGFSEGKGYVR----KPSDEHGKESKGFVAGLTVRGSNK-WSFAWTDK 115
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A6U0LMW1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0LMW1_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.440e-10 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGGGWL 249 Q +L CL+E H C+ LSK YL CRMD LMAKE +++GF+ E RI ++A + +KE EG+V G HI+ + GWL Sbjct: 34 QKYLECLKEEKQQHNKCRELSKDYLQCRMDNELMAKENLDEMGFS---ENARI-TEAKEYDKSKEKEGYVAGKHIKGKLTGWL 112
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A7R9VJK0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VJK0_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.880e-10 Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGGGWLSR 255 + +L CL+E H C+ LSK YL CRMDR LMA E+ +K+GF+ E E + A + +KE EG+V G HI + W R Sbjct: 31 EKYLECLKEERNKHHKCRDLSKEYLQCRMDRQLMANEDLDKMGFSKEAEVKN----AEEYDKSKEREGYVAGKHIDKPMKWWFQR 111
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A5J4XWT7_9CHLO (Cytochrome c oxidase assembly COX19 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XWT7_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 1.650e-9 Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRI-RSQAPVKEGTKEGEGFVGG 216 Q +LACL+ + GD C+ LSK+YL CRMDRNLMAK++ ++LGF +E++ + ++++ K+ +GF+ G Sbjct: 36 QDYLACLKYNTGDASKCRDLSKLYLQCRMDRNLMAKQDLKELGFGSEDKQQSATQTKSSDSHADKQKQGFIAG 108
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A5B8MH58_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MH58_9CHLO) HSP 1 Score: 65.1 bits (157), Expect = 2.970e-9 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGGGWLSRWKKKD 270 + +LACL++ GD L CK LSK YL CRMD+NLMA+E+ KLGF ++ +P + T E G GGG +R ++KD Sbjct: 32 KDYLACLKQEKGDSLECKLLSKKYLECRMDKNLMAREDLSKLGFR-----QKSVGNSPPRGKT---ESMASGKRKTDPGGGDQARQREKD 113
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A1Y1HX47_KLENI (CHCH domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HX47_KLENI) HSP 1 Score: 63.9 bits (154), Expect = 5.880e-9 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 4 SFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGG 216 +++ACL+EH PC+ LSK YL CRM+RNLMAK++ E+LGF E R + + + K+ GF+GG Sbjct: 37 AYMACLKEHGSQSEPCRELSKTYLQCRMERNLMAKQDLEELGFR-EGSNEREQPTSSTETDEKKRTGFIGG 106
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A1Q9DXS2_SYMMI (COX19 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DXS2_SYMMI) HSP 1 Score: 65.5 bits (158), Expect = 6.690e-9 Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGG 216 + +L CL++H D++ C+ LSK YL CRMD+NLM KE E+LGF TEE+ ++ K+ TKE G++ G Sbjct: 69 EEYLQCLKQHSHDNMSCRYLSKRYLQCRMDKNLMTKEPMERLGF-TEEDVSPAPARKKEKKKTKEETGWIVG 139
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A6V2EXL6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EXL6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.740e-8 Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGGGWLSRW 258 Q +L CL++ H C+ LS+ YL CRM+R LMAKE + +GF+ + ++ + V + +KE +GF+ G HI + W + Sbjct: 34 QEYLGCLKQEKDMHHKCRDLSRNYLECRMERQLMAKENLDDMGFSKDA---KVEGEVQVYDKSKEKDGFIAGKHIDKPTKWWFQNF 116
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A7S3E3M9_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E3M9_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 1.840e-8 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 1 QSFLACLEEHDGDHLPCKTLSKMYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGG 240 + +LACL++ GD L CK LSK YL CRMD+NLMA+E+ KLGF ++ ++A + K+GEG GT R + G Sbjct: 68 KDYLACLKQRKGDSLECKILSKKYLECRMDKNLMAREDLSKLGFREG----KLGAKAGQEGAPKKGEG---GTRSRAQEG 140 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11204.1086.1 >prot_L-elsbetiae_contig11204.1086.1 ID=prot_L-elsbetiae_contig11204.1086.1|Name=mRNA_L-elsbetiae_contig11204.1086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=69bp MYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGback to top mRNA from alignment at L-elsbetiae_contig11204:2983..5213- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11204.1086.1 ID=mRNA_L-elsbetiae_contig11204.1086.1|Name=mRNA_L-elsbetiae_contig11204.1086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2231bp|location=Sequence derived from alignment at L-elsbetiae_contig11204:2983..5213- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11204:2983..5213- >mRNA_L-elsbetiae_contig11204.1086.1 ID=mRNA_L-elsbetiae_contig11204.1086.1|Name=mRNA_L-elsbetiae_contig11204.1086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=414bp|location=Sequence derived from alignment at L-elsbetiae_contig11204:2983..5213- (Laminarionema elsbetiae ELsaHSoW15)back to top |