prot_L-elsbetiae_contig11204.1086.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11204.1086.1
Unique Nameprot_L-elsbetiae_contig11204.1086.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length69
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: D7FXT0_ECTSI (COX19 homolog, cytochrome c oxidase assembly protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXT0_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 4.800e-38
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0 
Query:    1 MYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGGGWLSRWKKKD 68
            +YLACRMDRNLMA+EEFEKLGF+TEEEY RIR QAPVKEGTKEGEGFVGGTHIRQRGGGWLS WKKKD
Sbjct:   53 LYLACRMDRNLMAREEFEKLGFSTEEEYERIRRQAPVKEGTKEGEGFVGGTHIRQRGGGWLSNWKKKD 120
[Close]
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Match: A0A7R9VJK0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VJK0_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 6.260e-5
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:    2 YLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGGTHIRQRGGGWLSR 63
            YL CRMDR LMA E+ +K+GF+ E E +     A   + +KE EG+V G HI +    W  R
Sbjct:   54 YLQCRMDRQLMANEDLDKMGFSKEAEVKN----AEEYDKSKEREGYVAGKHIDKPMKWWFQR 111
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11204.1086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXT0_ECTSI4.800e-3891.18COX19 homolog, cytochrome c oxidase assembly prote... [more]
A0A7R9VJK0_9STRA6.260e-543.55Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11204contigL-elsbetiae_contig11204:4087..5147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11204.1086.1mRNA_L-elsbetiae_contig11204.1086.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11204 2983..5213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11204.1086.1 ID=prot_L-elsbetiae_contig11204.1086.1|Name=mRNA_L-elsbetiae_contig11204.1086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=69bp
MYLACRMDRNLMAKEEFEKLGFATEEEYRRIRSQAPVKEGTKEGEGFVGG
THIRQRGGGWLSRWKKKD*
back to top