mRNA_L-elsbetiae_contig10056.102.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 178 bits (451), Expect = 4.980e-45 Identity = 127/243 (52.26%), Postives = 157/243 (64.61%), Query Frame = 2 Query: 605 EVVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVNVAGYMGQTPVLGSIMNCRSHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSFTPLTLTSGYLVSKT--VGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALEGTKRTTP-TTSLTLMMPILRTARRG--VLLAALYRQSSK 1318 EVVNE+IRQVGI+GCGG+S GV AL AA +++++ ILT+AGVVDTG ALV+AAG G E +K LL+ YVN G TP+L I + R PRVVRLLV+AGADTTS V + GG+ S TPL LT + K VG A+ +QL+ L+A+RRLLL+VEAVHAVSWLW S + S I+RAA GT RTT +T++TL M + R RG V LAAL R SSK Sbjct: 200 EVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARK---TMDEAAYVNTRDRGGVTPLLWGIQHYR---PRVVRLLVEAGADTTSPVAVRNQLGGD-DVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDI-STITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 176 bits (447), Expect = 2.480e-44 Identity = 123/243 (50.62%), Postives = 155/243 (63.79%), Query Frame = 2 Query: 605 EVVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVNVAGYMGQTPVLGSIMNCRSHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSFTPLTLTSGYLVSKTVGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALEGTKRTTPT----TSLTLMMPILRTARRGVLLAALYRQSSKM 1321 EVVNE+IRQVGI+GCGG+S G NAL AA + +D++AILTDAGVVDTG ALV+AAG G EA +K LL+ G + Y+N +G T +L I CR PRVV+LLV+AGADTTS V + PG E + TPL LT L ++ +K T ++ N L+ +RRLLL+ EAVHAVSWLW S P+ I+ A +GT RTT T T ++M RT R LLAAL R SSK+ Sbjct: 200 EVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQAR---GRKSTDRAAYMNTLNGVGLTSLLDGIQRCR---PRVVQLLVEAGADTTSPVLICNQPG-EDDFHITPLGLTMCLLGGRS--AKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPT-ITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSKL 432
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 178 bits (451), Expect = 3.060e-44 Identity = 122/241 (50.62%), Postives = 153/241 (63.49%), Query Frame = 2 Query: 605 EVVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVNVAGYMGQTPVLGSIMNCRSHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSFTPLTLTSGYLVSKTVGS-KDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALEGTKRTTPTTSLTLMMPIL--RTARRGVLLAALYRQSSK 1318 +VV E+I+++GIEGC S G +ALA AAS+ H+D++AILT+AGVVDTG+AL LAAG+G EASVK LL+ G G Y+N G TP++ C S APR+VR+LVDAGADTTS V + GG V ++ TPL T L K V K AT++ L L+A+ RLLL+V+AVHAVSWLW S P I RA T P +L LM+PIL RT RR L+A L R S K Sbjct: 292 DVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGA--YLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVV-FNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAP-FIGRAT--ETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 164 bits (415), Expect = 3.700e-40 Identity = 114/246 (46.34%), Postives = 148/246 (60.16%), Query Frame = 2 Query: 605 EVVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVN-VAGYMGQTPVLGSIMNCRSHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSF-TPLTLTSGYLVSKTVGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALEGTKRTTPTTS---LTLMMPILRTA--RRGVLLAALYRQSSKM 1321 EVV E+I+Q+G+ GCGG S GV +L AA+ +VD++ ILT GVVDTG ALV+AA E SVK LLQ GG YVN G+TP++ +I C S +PR+ R L+D GADT S V +T GE S TPL + L VG K+ATE+QL +LKA+ RLL Q+EAVHAVSWLW S + I A + R PTT+ L M +LRT +RGV+L A+YR + ++ Sbjct: 194 EVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQA-------GGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTR--SGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSS-DTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEEL 429
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 150 bits (379), Expect = 1.630e-35 Identity = 118/249 (47.39%), Postives = 143/249 (57.43%), Query Frame = 2 Query: 599 SLEVVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVNVAGYMGQTPVLGSIMNC----RSHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSFTPLTLTSGYLVSKTVGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISR---AALEGTKRTTPTTSLTLMMPILRT-ARR-GVLLAALYRQSSK 1318 +L V+ E+I++VGIEGCGG S G AL A V +A+LT AGVVDTG+AL ++AGLG EASVK LLQ + G YVNV G TP+L SI C +S PRV RLLV+AGADTT+ + T G V +S TPL LT L K V ++Q+L L+ +RRLLLQVEAVHA SWLW S R AA T L ++PILR ARR GV+ AL R K Sbjct: 181 NLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAK-----HYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMG-VVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRK 423
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 148 bits (373), Expect = 1.250e-34 Identity = 112/248 (45.16%), Postives = 143/248 (57.66%), Query Frame = 2 Query: 605 EVVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAG-VVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVN-VAGYMGQTPVLGSIM--NCRSHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSFTPLTLTSGYLVSKTVGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALEGTKRTTPT---TSLTLMMPILRT--ARRGVLLAALYRQSSKM 1321 +V EMIRQVGI GCGG S GV AL AA H++ +A+L DAG VVDTG AL+LAA G +VK LL+ + + YVN G+TPV+ ++ R +P++VRLLVDAGA+TT AV +T + S TPL T+ L V + AT++QL LK R LL + EAVHAVSWLW S P I++AA + T T T L M P+LR RGVLL L+R S K+ Sbjct: 196 DVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQ-------ADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRKV 436
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.550e-34 Identity = 110/244 (45.08%), Postives = 140/244 (57.38%), Query Frame = 2 Query: 605 EVVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVN-VAGYMGQTPVLGSIMNCRSHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSF---TPLTLTSGYLVSKTVGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALEGTKRTTPTTS---LTLMMPILRTA--RRGVL-LAALYR 1306 EVV E+ Q+G+ GCGG S GV +L A + VD++ ILT GVVDTG ALV+AA E SVK LLQ GG YVN G+TP++ +I C S +PR+ R L+DA ADT S V +T QW+ TPL + L VG K+ATE+QL +LKA+ RLL QV+AVHAVSWLW S + S A + R PT + L M +LRT +RGV+ L A+YR Sbjct: 184 EVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQA-------GGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTK----SGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSS-DTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 144 bits (364), Expect = 2.250e-34 Identity = 113/253 (44.66%), Postives = 142/253 (56.13%), Query Frame = 2 Query: 602 LEVVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVNVAGYMGQTPVLGSIMNCRSHA---------PRVVRLLVDAGADTTSAVPLTPYPGGEVQWSFTPLTLTSGYLVSKTVGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALEGTKRTTP--TTSLTLMMPILRTAR---RGVLLAALYRQSSK 1318 LEVVNE+IRQVGI GCGG+S GV AL AA + H+D+L +LT+AGVVDTG A V + G G N G T V CR A PRVVRLLV+AGADTTS VP+ PG + + TP+ LT L+ +G++ TE+QLN L+A+ RLLL+VEA+HAVSWLW S + + A +GT RTT T L++ + + AR R V LAAL R SSK Sbjct: 101 LEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLARGRRIWRRGPLEVSV-------------GAGKGEEN----HGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPGTD---NITPMGLTM--LLLHDLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTA-QGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSK 330
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: D7FYA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA6_ECTSI) HSP 1 Score: 147 bits (370), Expect = 2.450e-33 Identity = 107/240 (44.58%), Postives = 138/240 (57.50%), Query Frame = 2 Query: 608 VVNEMIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAAGLGSEASVKILLQXXXXXXGGIYSGGNGYVNVAGYMGQTPVLGSIMNCR-SHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSFTPLTLTSGYLVSKTVGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALEGTKR------TTPTTSLTLMMPILRTARRGVLLAALYR 1306 VV ++I+Q+GI+GCGGAS G +AL A D++ +L DAGV+DTG L+ A GSEASVKILLQ + N YVN G+TPV+ SI S +PRV+RL +DAGADT S V + G EV +S TPL T+ L + + D+T+ Q LKAV R+LLQ+EA+ AVSW W S S I RA ++GT R T P LTL R VL+ A+ R Sbjct: 333 VVRKLIQQLGIQGCGGASAGADALRRAVRTQQYDIVVMLADAGVIDTGRVLIDATKFGSEASVKILLQQQRWK----HMDWNTYVNKKHPDGRTPVVCSIGRALLSGSPRVLRLFLDAGADTASTVRIANKEGVEV-FSGTPLAYTTWLLRDQQAQAIDSTKGQPCGLKAVCRMLLQLEAIRAVSWCWQSDASSPIERAVMDGTPRAKSKLTTDPPLGLTLPRTRRRARAHRVLVMAISR 567
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 137 bits (344), Expect = 1.060e-32 Identity = 97/209 (46.41%), Postives = 126/209 (60.29%), Query Frame = 2 Query: 695 HNHVDVLAILTDAGVVDT-GEALVLAAGLGSEASVKILL-QXXXXXXGGIYSGGNGYVNVAGYMGQTPVLGSIMNCRSHAPRVVRLLVDAGADTTSAVPLTPYPGGEVQWSFTPLTLTSGYLVSKTVGSKDATEQQLNTLKAVRRLLLQVEAVHAVSWLWHSLVPSLISRAALE-GTKRTTPTTSLTLMMPILRTARRGVLLAALYRQS 1312 + H+D++AILT AGV D G L+ AGLG EASV+ LL Q +++ Y N + G TP+ SI C S PR+VRLLVDAGADTTS V +T GG V+++ TPL +T+ L K V K ATE+QL+ L+A+RRLLL+V+AVHAVSWLW S PS++ G + P SLTL + R V +A L R S Sbjct: 2 NQHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHA----YANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGG-VEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSS 205 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10056.102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10056.102.1 >prot_L-elsbetiae_contig10056.102.1 ID=prot_L-elsbetiae_contig10056.102.1|Name=mRNA_L-elsbetiae_contig10056.102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp MIRQVGIEGCGGASDGVNALASAASHNHVDVLAILTDAGVVDTGEALVLAback to top mRNA from alignment at L-elsbetiae_contig10056:1478..4750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10056.102.1 ID=mRNA_L-elsbetiae_contig10056.102.1|Name=mRNA_L-elsbetiae_contig10056.102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3273bp|location=Sequence derived from alignment at L-elsbetiae_contig10056:1478..4750- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10056:1478..4750- >mRNA_L-elsbetiae_contig10056.102.1 ID=mRNA_L-elsbetiae_contig10056.102.1|Name=mRNA_L-elsbetiae_contig10056.102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1410bp|location=Sequence derived from alignment at L-elsbetiae_contig10056:1478..4750- (Laminarionema elsbetiae ELsaHSoW15)back to top |