mRNA_L-elsbetiae_contig1108.970.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1108.970.1
Unique NamemRNA_L-elsbetiae_contig1108.970.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: A0A6H5KCG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG9_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 8.400e-177
Identity = 258/333 (77.48%), Postives = 293/333 (87.99%), Query Frame = 2
Query: 1355 DARAAAPPEAACIAVAGPVSQNKVVMTNRNWVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLDIDTECATVQAGERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAYDISRVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVPGSICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQ--GADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMRLHHEQHEEEYKKHHLQKVVAFSATSMVALAALAAVVGAAVARAMSRR 2347
            DA    PPE ACIAVAGPV  N+VVMTNR WV++GAEI E F+I  VRLVNDFVAAGYGLLTLDID ECA +QAG+R++GAPI CIGSGTGLGETFLTCP+GGE YDAWPTEGGH+EM+PRDDLEYDL+K+I K ++ +RVSVERVASGTGLVNVYNFL + FP+RVDK  HE +QAAGDQKG VISKNS VPGSICEQV+EIWATHYGAEAGVMGLRCIPTGGLF+AGGMTHK + +++  G DSPFMKGF+DKGRVSGLLKAVP+YAVLVEDIGLRGAHFVA RL+   HE+E KKHHL+KVVA SATS++ALA ++A VGAAVARA+ RR
Sbjct:   61 DADLVEPPETACIAVAGPVIANRVVMTNRAWVIDGAEIEEMFSITSVRLVNDFVAAGYGLLTLDIDAECAMLQAGDRQEGAPIGCIGSGTGLGETFLTCPVGGEVYDAWPTEGGHSEMAPRDDLEYDLIKYIKKTHETNRVSVERVASGTGLVNVYNFLVETFPERVDKAVHEELQAAGDQKGAVISKNSTVPGSICEQVMEIWATHYGAEAGVMGLRCIPTGGLFIAGGMTHKNLRMLEARGEDSPFMKGFHDKGRVSGLLKAVPMYAVLVEDIGLRGAHFVAYRLYRRHHEDENKKHHLKKVVALSATSVLALAVVSAAVGAAVARAVFRR 393          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: D8LB65_ECTSI (Glucokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB65_ECTSI)

HSP 1 Score: 521 bits (1343), Expect = 1.300e-174
Identity = 252/316 (79.75%), Postives = 280/316 (88.61%), Query Frame = 2
Query: 1355 DARAAAPPEAACIAVAGPVSQNKVVMTNRNWVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLDIDTECATVQAGERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAYDISRVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVPGSICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMRLHHEQHEEEYKKHHLQKVVAFSATSMVALAAL 2302
            DA    PPE ACIAVAGPVS N+VVMTNR WV++GAEI E FNI  VRLVNDFVAAGYGLLTLDID ECA +QAG+RK+GAPI CIGSGTGLGETFLTCP+GGE YDAWPTEGGH+EM+PR+DLEYDL+K+I K ++ SRVSVERVASGTGLVNVYNFL + FP+RVDK  HE  QAAGDQKG VISKNS VPGSICEQV+EIWATHYGAEAGVMGLRCIPTGGLF+AGGMTHK + +++G DSPFMKGFYDKGRVS LLKAVPVYAVLVEDIGLRGAHFVA RL+  QH +EYKKHHL+KVVA SATS++ LAA+
Sbjct:   61 DAEVVEPPETACIAVAGPVSDNRVVMTNRAWVIDGAEIEEMFNITSVRLVNDFVAAGYGLLTLDIDAECAMLQAGDRKEGAPIGCIGSGTGLGETFLTCPVGGEVYDAWPTEGGHSEMAPRNDLEYDLIKYIKKTHETSRVSVERVASGTGLVNVYNFLVETFPERVDKAVHEEFQAAGDQKGAVISKNSTVPGSICEQVMEIWATHYGAEAGVMGLRCIPTGGLFIAGGMTHKNLRMLEGEDSPFMKGFYDKGRVSSLLKAVPVYAVLVEDIGLRGAHFVAYRLYRRQHGDEYKKHHLKKVVALSATSVLTLAAV 376          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: A0A835YKJ2_9STRA (Glucokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKJ2_9STRA)

HSP 1 Score: 332 bits (850), Expect = 9.940e-103
Identity = 162/284 (57.04%), Postives = 209/284 (73.59%), Query Frame = 2
Query: 1373 PPEAACIAVAGPVSQNKVVMTNRNWVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLDIDTECATVQAGERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAYDISRVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVP----GSICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMRLH 2212
            PP  AC+A+AGPV++N+ +MTNR WV++G E++    I  VRLVNDFVAAG+GLLTLD+ +E  T+Q G R  GAPIACIGSGTGLGETFL  P G  AY+A+PTEGGH  ++PR +LE+++++++ +     R+SVERV SG G+  VY FLAQ FP+RVD+  H+    AGD +G VIS+ + V     GS+C Q LE+WATHYG EAG   L+ +P GGLFLAGGMT KLI  + G DS FMK F D+GRVS +L A+P+YAVL EDIG RGAH+ A+ L+
Sbjct:   52 PPVVACLALAGPVTENRCLMTNRGWVIDGYELSLELGIKEVRLVNDFVAAGFGLLTLDLCSEVLTLQEGARCLGAPIACIGSGTGLGETFLAAPHGSTAYEAFPTEGGHVALAPRSELEFEMVQWMKEHLHAKRISVERVVSGRGIATVYEFLAQRFPERVDRAVHDEFLNAGDLQGAVISRGAKVEVRARGSLCRQTLEMWATHYGMEAGHAALKFMPLGGLFLAGGMTPKLIDWLTGPDSCFMKAFKDQGRVSPMLDAIPIYAVLEEDIGQRGAHYAALMLY 335          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: A0A7S2GDA4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GDA4_9EUKA)

HSP 1 Score: 292 bits (748), Expect = 2.420e-83
Identity = 153/295 (51.86%), Postives = 200/295 (67.80%), Query Frame = 2
Query: 1343 IRT*DARAAAPPEAACIAVAGPVSQNKVVMTNRNWVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLDIDTECATVQAGERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAYDIS-RVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSG-VPG----SICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMRL 2209
            + T  A     P AAC+AVAGPV +N V  TNRNWV+ GA++  +F IA+V+L+NDFVA GYGLLTLD   EC T+Q   + +GAPIAC+G+GTGLGE F T    G  Y+ + +EGGH + +PR  LE +L++F+   +    RVSVERV SG GL  +Y F +  FP +V    H AI+AAG+ KG  ISK+S  V G     +C+  ++ +A  YGAEAGV  L+ IP GGL++AGG+T K + L++G DS FM+ F DKGR+S L++ VPVYAVL EDIG RGAH VA RL
Sbjct:  354 VETFLAECKGVPAAACLAVAGPVEKNAVNFTNRNWVINGAKLEAKFGIAKVKLINDFVANGYGLLTLDEKKECVTLQEAPKVEGAPIACVGAGTGLGECFSTSTDAGTPYETYASEGGHGDWAPRSALEVELLEFMKSKFGGKHRVSVERVISGPGLATMYEFFSGKFPSKVVPEVHAAIEAAGEMKGKFISKHSQKVVGMAHCELCKLTMDTFAAAYGAEAGVAALKWIPLGGLYIAGGLTPKNLSLLRGDDSAFMQAFRDKGRLSPLIRRVPVYAVLAEDIGQRGAHLVAFRL 648          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: R1BWK2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BWK2_EMIHU)

HSP 1 Score: 285 bits (730), Expect = 4.060e-80
Identity = 152/296 (51.35%), Postives = 199/296 (67.23%), Query Frame = 2
Query: 1364 AAAPPEAACIAVAGPVSQNKVVMTNRNWVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLDIDTECATVQAGERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAYDIS-RVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVPGS-----ICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMRLHHEQHEEE 2233
            A  PP AAC+AVAGPV +N V  TNR+WV++G  +  RF I +VRLVNDFVA GYGLLTLD   EC T+QA  +  GAP+AC+G+GTGLGE F T    G  Y+ + +EGGH++ +PR  LE +L+ F+   +    RVSVERV SG GL  +Y+F +  FPD+V    H A+ AAG+ KG VI+++S  PG+     +C   +E +AT +GAEA    L+ +P GGL++AGGMT K + L++GADS FM+ F DKGR+S LLK VPV   L EDIG RGAH VA R+     EE+
Sbjct:  449 APPPPSAACLAVAGPVERNAVSFTNRDWVIDGGALERRFGIGKVRLVNDFVANGYGLLTLDEAKECVTLQAAPKVAGAPMACVGAGTGLGECFSTASAEGSPYETFASEGGHSDWAPRTALEVELLGFLKDRFGQKHRVSVERVISGPGLATMYDFFSARFPDKVVAEVHAAVGAAGELKGKVIAQHS-APGAAPFCELCRLTMETFATAFGAEAASAALKWVPLGGLYIAGGMTPKNLRLLEGADSLFMRAFGDKGRLSPLLKRVPV---LAEDIGQRGAHLVAFRMLLTMQEEQ 740          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: A0A7S2JP98_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JP98_9STRA)

HSP 1 Score: 271 bits (692), Expect = 1.190e-79
Identity = 139/282 (49.29%), Postives = 192/282 (68.09%), Query Frame = 2
Query: 1385 ACIAVAGPVSQNKVVMTNR---NWVVEGAEIAERFNIARVR-LVNDFVAAGYGLLTLDIDTECATVQAGERK--QGAPIACIGSGTGLGETFLTCPMG-GEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAYDIS-RVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVPGSICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMR 2206
            AC A AGPV QN    TN     + V+G  I E+F + +   +VNDFV  GYGLLT+DI+ EC  +  G     +  PI C+G+GTGLGE +LT   G  + Y  +P+EGGH++  PRD+++  L+ FI K Y    RVSVERV SG+GLVNVY+FLA  +PD++D TAH+ I+A G+ KG  I+ N+  PGS+CEQ + I+A+ YGAE G   ++ IPTGG+FL GG+T K I  I G ++PFMK + D+GR+S L+K +P+YAVL ED+G+RGA+  A++
Sbjct:   57 ACFACAGPVLQNCCCFTNLADGKFKVDGTAICEQFPVMKAASVVNDFVGMGYGLLTVDIEKECIVINEGADPIDETGPICCVGAGTGLGECYLTTSTGLRDGYKCFPSEGGHSDFVPRDEVQVKLLNFIQKRYGCQHRVSVERVCSGSGLVNVYDFLAAEYPDKIDPTAHKLIEAGGEVKGKFIAMNA-TPGSLCEQAMTIFASTYGAETGSAAVKFIPTGGIFLTGGLTPKNIKYISGTETPFMKAYVDRGRLSNLMKKIPIYAVLPEDLGIRGAYVCALK 337          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: A0A4D9DCS1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCS1_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.280e-79
Identity = 147/278 (52.88%), Postives = 199/278 (71.58%), Query Frame = 2
Query: 1385 ACIAVAGPVSQNKVVMTNRN-WVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLD-IDT-ECATVQAGERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAYDIS-RVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVPGSICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMR 2206
            AC+AVAGPV+ N+V MTNR  W++ G  +A+   + RV L+NDFVA GYGLLT+D  DT E   +Q    + GAPIA IG+GTGLGE FLT P     Y A+P+EGGHAE  PR + E+ L++F+ + Y+   RVSVERV SG G+ NVY+FLA+ +PD+VDK+   A +AAG+  G ++S+N+  PG++    L+I+A  YG+EAGV GL+ +P GGLF+ GG+T K I  I G +S FM+ F DKGRVS LL  +P+YAVLVED+G RGAH++A++
Sbjct:  102 ACVAVAGPVAHNEVKMTNRGRWIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLT-PGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENA-KPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGKNSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIK 377          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: A0A7S1HTF8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HTF8_9EUGL)

HSP 1 Score: 266 bits (681), Expect = 8.900e-77
Identity = 146/280 (52.14%), Postives = 188/280 (67.14%), Query Frame = 2
Query: 1376 PEAACIAVAGPVSQNKVVMTNR-NWVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLDIDTECATVQAGERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAY-DISRVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVPGSICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSP-FMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMR 2206
            P +AC AVAGPV  N V  TNR  WV++G ++AE+  I  +RL+NDFVA GYGLLTL  + E  T+Q    KQGAPIACIG+GTGLGETFLTC  G   YDAWP+EGGHAE +PR++L+  L+ F+MK +   SRVSVER+ SG GLVNVY FL + FP+++  T  + +  A D  G V++ N+    ++C+  +EI    YG+E G   L+ +P GGL++AGG+  K +      DSP FM  F DKGRVS  LK VP+  VL EDIG RGA  VA+R
Sbjct:  157 PVSACFAVAGPVDGNAVAFTNRAGWVIDGNQLAEQLQIPHIRLINDFVANGYGLLTLKRE-ETVTLQDAPVKQGAPIACIGAGTGLGETFLTCRDG--QYDAWPSEGGHAEFAPRNELQIKLLHFLMKRFKSTSRVSVERIVSGIGLVNVYEFLREQFPEKILPTVDQELVQAKDMGGRVVASNASKC-TLCKMAMEIMVDVYGSECGTGALKWLPFGGLYIAGGLAPKNLKFFT--DSPTFMDAFLDKGRVSPALKQVPIKIVLAEDIGQRGALLVAVR 430          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: W7U8G2_9STRA (Glucokinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8G2_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.820e-73
Identity = 140/271 (51.66%), Postives = 189/271 (69.74%), Query Frame = 2
Query: 1430 MTNRN-WVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLD-IDT-ECATVQAGERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAYDIS-RVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVPGSICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMR--LHHEQH 2224
            MTNR  W++ G  +A+   + RV L+NDFVA GYGLLT+D  DT E   +Q    + GAPIA IG+GTGLGE FLT P     Y A+P+EGGHAE  PR + E+ L++F+ + Y+   RVSVERV SG G+ NVY+FLA+ +PD+VDK+   A +AAG+  G ++S+N+  PG++    L+I+A  YG+EAGV GL+ +P GGLF+ GG+T K I  I G +S FM+ F DKGRVS LL  +P+YAVLVED+G RGAH++A++  L H  H
Sbjct:    1 MTNRGRWIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLT-PGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENA-KPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLEHLNH 269          
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Match: A0A7S2Y0X7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0X7_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.430e-72
Identity = 131/283 (46.29%), Postives = 186/283 (65.72%), Query Frame = 2
Query: 1376 PEAACIAVAGPVSQNKVVMTNRNW-VVEGAEIAERFNIARVRLVNDFVAAGYGLLTLDIDT--ECATVQAGERKQGAPIACIGSGTGLGETFLTCP-MGGEAYDAWPTEGGHAEMSPRDDLEYDLMKFIMKAY-DISRVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAIQAAGDQKGGVISKNSGVPGSICEQVLEIWATHYGAEAGVMGLRCIPTGGLFLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGLRGAHFVAMRL 2209
            P AAC+AVAGPV  N V +TNR W  +EG ++  +  I RV+LVNDFV  G+GLLTL+     E   VQ G  K G PIACIG+GTGLGE +L     G   Y+A+PTEGGH + +P++++E+ LM+F+ + + + +RVSVERV SG GL   Y ++A+AFPD+V+   H   +AAGD     ++  +     +C++V+E++A  YG EA    L+  PTGGL+LAGG+  K   LI    SPF+  + DKGR+ G++  +P++ VL E++GLRGAH VA +L
Sbjct:   97 PAAACLAVAGPVKSNSVTLTNRGWSTIEGKKLERQLGIERVKLVNDFVGTGFGLLTLNSSNPKEIRVVQGGTPKLGGPIACIGAGTGLGEVYLAPNGPGTHDYEAFPTEGGHTDWAPKNEVEFGLMQFLKEKFGEPNRVSVERVVSGPGLATAYEYMAKAFPDQVNNEFHARFEAAGDLNAREVAVGAKEGDVLCKKVMELFAKEYGYEAANAALKYGPTGGLYLAGGIAPKNPELIADEGSPFLCAYADKGRMKGVVGDIPLFMVLNEEVGLRGAHLVAFKL 379          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1108.970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCG9_9PHAE8.400e-17777.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB65_ECTSI1.300e-17479.75Glucokinase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A835YKJ2_9STRA9.940e-10357.04Glucokinase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2GDA4_9EUKA2.420e-8351.86Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
R1BWK2_EMIHU4.060e-8051.35Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S2JP98_9STRA1.190e-7949.29Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A4D9DCS1_9STRA1.280e-7952.88Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1HTF8_9EUGL8.900e-7752.14Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
W7U8G2_9STRA1.820e-7351.66Glucokinase n=1 Tax=Nannochloropsis gaditana TaxID... [more]
A0A7S2Y0X7_9STRA6.430e-7246.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1108contigL-elsbetiae_contig1108:2971..10975 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score488.4
Seed ortholog evalue2.4e-135
Seed eggNOG ortholog2880.D8LB65
Preferred nameGLK1
KEGG rclassRC00002,RC00017
KEGG koko:K00845
KEGG ReactionR00299,R01600,R01786
KEGG Pathwayko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00001,M00549
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glucokinase
EggNOG OGs2QSB1@2759,COG0837@1
EC2.7.1.2
COG Functional cat.G
BiGG ReactioniRC1080.CRv4_Au5_s1_g1623_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionGlucokinase
Ec32 orthologEc-27_005030.1
Exons9
Model size2487
Cds size921
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815322.3338206-UTR-L-elsbetiae_contig1108:2970..43991622815322.3338206-UTR-L-elsbetiae_contig1108:2970..4399Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1108 2971..4399 +
1691682837.8673491-UTR-L-elsbetiae_contig1108:2970..43991691682837.8673491-UTR-L-elsbetiae_contig1108:2970..4399Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1108 2971..4399 +
1622815322.5056338-UTR-L-elsbetiae_contig1108:10838..109751622815322.5056338-UTR-L-elsbetiae_contig1108:10838..10975Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1108 10839..10975 +
1691682837.9798253-UTR-L-elsbetiae_contig1108:10838..109751691682837.9798253-UTR-L-elsbetiae_contig1108:10838..10975Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1108 10839..10975 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815322.3453274-CDS-L-elsbetiae_contig1108:4399..44351622815322.3453274-CDS-L-elsbetiae_contig1108:4399..4435Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 4400..4435 +
1691682837.8799121-CDS-L-elsbetiae_contig1108:4399..44351691682837.8799121-CDS-L-elsbetiae_contig1108:4399..4435Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 4400..4435 +
1622815322.3561497-CDS-L-elsbetiae_contig1108:5374..54821622815322.3561497-CDS-L-elsbetiae_contig1108:5374..5482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 5375..5482 +
1691682837.8907878-CDS-L-elsbetiae_contig1108:5374..54821691682837.8907878-CDS-L-elsbetiae_contig1108:5374..5482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 5375..5482 +
1622815322.36888-CDS-L-elsbetiae_contig1108:6373..64611622815322.36888-CDS-L-elsbetiae_contig1108:6373..6461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 6374..6461 +
1691682837.9029825-CDS-L-elsbetiae_contig1108:6373..64611691682837.9029825-CDS-L-elsbetiae_contig1108:6373..6461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 6374..6461 +
1622815322.3847237-CDS-L-elsbetiae_contig1108:7286..73691622815322.3847237-CDS-L-elsbetiae_contig1108:7286..7369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 7287..7369 +
1691682837.9184413-CDS-L-elsbetiae_contig1108:7286..73691691682837.9184413-CDS-L-elsbetiae_contig1108:7286..7369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 7287..7369 +
1622815322.400086-CDS-L-elsbetiae_contig1108:7955..80851622815322.400086-CDS-L-elsbetiae_contig1108:7955..8085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 7956..8085 +
1691682837.9295316-CDS-L-elsbetiae_contig1108:7955..80851691682837.9295316-CDS-L-elsbetiae_contig1108:7955..8085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 7956..8085 +
1622815322.4178536-CDS-L-elsbetiae_contig1108:8409..84861622815322.4178536-CDS-L-elsbetiae_contig1108:8409..8486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 8410..8486 +
1691682837.9399407-CDS-L-elsbetiae_contig1108:8409..84861691682837.9399407-CDS-L-elsbetiae_contig1108:8409..8486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 8410..8486 +
1622815322.4630022-CDS-L-elsbetiae_contig1108:9463..95861622815322.4630022-CDS-L-elsbetiae_contig1108:9463..9586Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 9464..9586 +
1691682837.95286-CDS-L-elsbetiae_contig1108:9463..95861691682837.95286-CDS-L-elsbetiae_contig1108:9463..9586Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 9464..9586 +
1622815322.4764261-CDS-L-elsbetiae_contig1108:9981..101131622815322.4764261-CDS-L-elsbetiae_contig1108:9981..10113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 9982..10113 +
1691682837.9627578-CDS-L-elsbetiae_contig1108:9981..101131691682837.9627578-CDS-L-elsbetiae_contig1108:9981..10113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 9982..10113 +
1622815322.4908617-CDS-L-elsbetiae_contig1108:10694..108381622815322.4908617-CDS-L-elsbetiae_contig1108:10694..10838Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 10695..10838 +
1691682837.9709086-CDS-L-elsbetiae_contig1108:10694..108381691682837.9709086-CDS-L-elsbetiae_contig1108:10694..10838Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1108 10695..10838 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1108.970.1prot_L-elsbetiae_contig1108.970.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1108 4400..10838 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1108.970.1

>prot_L-elsbetiae_contig1108.970.1 ID=prot_L-elsbetiae_contig1108.970.1|Name=mRNA_L-elsbetiae_contig1108.970.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
MTNRNWVVEGAEIAERFNIARVRLVNDFVAAGYGLLTLDIDTECATVQAG
ERKQGAPIACIGSGTGLGETFLTCPMGGEAYDAWPTEGGHAEMSPRDDLE
YDLMKFIMKAYDISRVSVERVASGTGLVNVYNFLAQAFPDRVDKTAHEAI
QAAGDQKGGVISKNSGVPGSICEQVLEIWATHYGAEAGVMGLRCIPTGGL
FLAGGMTHKLIHLIQGADSPFMKGFYDKGRVSGLLKAVPVYAVLVEDIGL
RGAHFVAMRLHHEQHEEEYKKHHLQKVVAFSATSMVALAALAAVVGAAVA
RAMSRR*
back to top

mRNA from alignment at L-elsbetiae_contig1108:2971..10975+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1108.970.1 ID=mRNA_L-elsbetiae_contig1108.970.1|Name=mRNA_L-elsbetiae_contig1108.970.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8005bp|location=Sequence derived from alignment at L-elsbetiae_contig1108:2971..10975+ (Laminarionema elsbetiae ELsaHSoW15)
TTTGTTTTCTTCGCAGACTTCCGCGTGTTGCCGTCGTCTGTTTGTTTCTC ATTTCGTAGACTCTCGCGCGACGCCGGAGTCTCGTTTCGTTCTCTCCCCG CGGCCTTCCGCGTGTTGCCGTTGGCGGTTTGTTTCTGTTTTCTGGTCGAC TTTCGCACATAGCCGACGTCTGTTTCGGTTTTATCTCGCCGACTCCTGTG TGTTGCCGTTGTCTATTTGTTTTCTGTTTTTCTGACGTCGTTTCCGCGTT GCCGCTGCCTTTGGTTTGTTCCTCTGGTCGGCCCCGTCTTGCAACTGATT TGCTTGCGTTTCGCGTCCTCTTTCGCTATTTGCTCGAATTAGTACTTTCT ATGGGTCCTCGTCGTAGCGTATACGTACCTGGCCGTCGCCTTTTCGCGCC TTTATTTCGGAAGCTCCACACGTTTCCTCTCTTTCGCAGATCGACTGTTT CTGATGACTTGCGACGTGAATTTAGTAAGTCTCTCCGGTTGTCTTTCTCC CGCTGCTGTCTTCGGTTACCTTTGAACACTTGCGACAAGAATCCCGCAAG TTTCTCCAGTTGCCTTTAGTTAGTTGCCGTCTTTATTATTTTGTTTTTTG ACTGCCGTTGAATACTTCCGACAAGATTCCCGCAAGTTTCCCCGGTCATC TTTGAGTCCACCACTGGTTTAGACCATTTCTTTGGACTTCCACCCTGCTT CCTGCCGCTTAACCCTTAAAGATCTAGATGGCCATATGGCGACGATTTGG CGACACACGCGGCGGCATGGTACAATCACACGTTGTCCCCTACAGGGATA GTTTCTGTATAGCCAAGGACTGGAAACACGTTTGATAGGGCCTTCGGTAT AGAAATTGTCGCCAAACGTTTGACAGGGTGTTTAGGCTGGAATTTGTCGC CAATTTGTTTGTTTCGGGTCTTCTCTCTGCTGTGTGCACGGAAGCTTGTC TAACCGTGGTATGCGTTCCTCATTCATTTATGGGGAAGCATAACACCCTC TTACCCTGCCCCTAACACTCTGCTGCGGGTGTTTGGCAGCGCAGACAAAC ATCTGGTCCCGCAGCTGGGGTTTTGTAGGGACCGTGGCTCGTAGCCAATC ATAGGCGACCAGTCTTCTGCGATTTTTTTCTCCCATGATAACTGTGTTCT TAAGGGTTGAGCATGTTTGGAGCCACAGGCTGCAATAGAGTAGGAGTATT TCCGTGCACGTCCCCGTCTTTTCATGGGGTTCTTTATTTAATTAACTAAT TTTATGTACAATTATTATACACGTGTCGCGTTGTTGTTGCGCACGCGGTC TGTTGGGCGTGGCGTGGGCGGCGGTGGCTGCGAATGACATACATACGTAC ATAGGACGCCCGCGCGGCGGCGCCCCCGGAGGCGGCCTGCATCGCGGTGG CGGGCCCTGTCAGCCAAAACAAGGTCGTCATGACCAATCGCAACTGGGTT GTCGAGGGCGCCGAGGTAAGGTGACTCCCGAAACCGAAAAAAGGGTTTCG TCGTCAAAGATTGTAGATAGGAGGCAGAGGAAAACGAAAGACCTCGACCC GGTCGCTGCCGAGGAAGTTTACCTGCGCGAGGTTCTTGCCAGCTTCTTGT CTTGAACAGGAATGATTGACCTTGTTGAAGAAGAAAGCTTCTTAGTTCTC GGGGTCGTGCAACGCTTTTGTTGGGTGTAACAATTGATAGGAAATGTAAT TTGTTTTGAGACAAGAGTGTTAAAAAAACGGAAAACATGATTTTTTGGTG TATAGGATGCGCTTTGTTGGTACAACAGGCTGGATCAAGTGCGGCGTGAT AGCAGAGAAACGTTTTTGAGCCAAGCGTGGCCCTGAAAAAGTGACCGAAT GATGGAAGCCTTTGCCTTGGAGAACACATTTGGAGTCGCAAACGAGACCG CATGCACACCCCTTTCGTGCACGGGACGTCCGTCGGAAGGAATATCTGTG CACAGGAGTAGATCAGCGTAAGTAGAGCATACGTCCGGGCACCCGTTGCC AAGACCATCGCGCTGCAGCGGGCTAGATGGTGGAGTTCGAGGCTTTTCGC CGCCGCAGCTGCCATCCCTGACTGCTGTGCCGCAACCTGCCGCAGATTGA CTATGAATTATGTAGCAGCTAAGAGTCCAACAATAGTAGTAGGTAGAATG CCGAAGCGATCCCTGCAGTGGTGGAAAATACCCCCTCCAAAATACCGCAT TGCTCTCGTTTCCCACGGCGGAGAGTCTTCACAATTCCGAAGGCGCCAGA TCTTGTACACCCACTGCTGTGTCATATTTTTCTCTCTCGTGTGCGTGTGT GTTTATGTGTGTGTGTTTGTTTGTGTTCGTGTGTGTCGACACAATACTTG GGGCGTTTGCCATACGTTTGTCGATAAAAACGTGCCTCGCGTGTGGCCGC TCAGATCGCGGAGAGGTTCAATATCGCCCGGGTGCGGCTGGTCAACGACT TCGTGGCCGCCGGGTACGGTCTGCTCACGCTCGACATCGACACGGAGTGC GCCACGGTGCAGGTGAGTTAGGTTTTGGCTAAACCCGCTCGGCGTTGCCT GAGGTGCAGGTACCGTGCGCAATGTTAGGCGTGTCGTCACGTGCGTGTTG TCCTGCGTTTCGACAAGGTAAGTTTGGACGAGAGCGTCGAGGCTTGTTGT CCCCTTGAACGGGACGTCAACAGCACAGTAACAGCAGCAGCCACAAAATC ACGACCACAACATGTCATTCTGACCAGCTTGTCGGGAATGTGTGCGGCCG GGGTCGACGCGCGGCGACGTTTATTTTTTCGTATTCGTTCGACTTTGCAC AGATGTGATTTGTACCAAAAGTATGGTGCATCATACATATTGCGGGTGTA GAAGGTGCAGTAGACGACAGAACGGTCTTCAGAACGGTCTTCGAAAAGGA AGTACGTTTTGTCTCGACGCGCATGCCTGCGAAGTCGGGCTCCAGCGCCT GGCATGCGCGCTGCGTCCCCCCCTCTCTCCCGCACAGGCGTTTTGAGCAC CCGCAGAGTTTTTTCTCTTCCTTTCCCTCCCATTATTATGGGCTTATTCA TCGTCTGCTCCACTGGCCCCCTTCCTCCACTACGACTAGCTAGACGACCC AACCGGGGTCACAGGGCGCTGTTTCCTCCTCAAAGCACGGCAGTAGTGCA CCATACGGCGGTGTGGCACAGCAGCGCGGATGGCGAGGGGCGTTTGGCGC GGTCGAGGCTGCATCCCCTGAAAAGATCAAAACACACACACACACACACA CACACACACTTTTGCTTAAATAGGCCCACGCCTACACCTACCCAAAGCCG GCCGCCGGCGGCAATACATACCTACTCACCCGTGTTGGAAGAGCTGTACC CCCCGCCCCAACTCCCTCCATTGCTTGGCCCCCATCGACACCGCTTTCGG AAGGCCGGCGAGCGCAAGCAGGGGGCGCCGATCGCGTGCATCGGCTCCGG TACTGGGCTGGGAGAGACGTTCTTGACCTGCCCTATGGGAGGTGAGAAAA CATGAAGTTCCATCGCCGACGCGGCAACTGCTTTGCTGTTGGGCGCTGTT TTCCGGGGAAGTTGGGAAAGGGGCGGTTTGCTCCGCGGAGGTGGAGAACA AACGCCAATGAGAGTGATGGCATCGAAAGGATCCGCCAGCAAAACCCATA CCTTGCTAGTGCACCCGTCTGGTGGGTGGCAATAAACTCTTTATTCAAGA GACGTGTGAACGGCAGCTTTTGTGCTGGTGCACCTTATGGTGCGAGCGTT TCTCCGGACACCCCTCGGGCGGGCTCATGGTAAGCCTCTCTTCGAGAAGA AAGGCGCCGCTGTTTTGTGTTGGTATGCCATCGTTGTTCCTGGTGTCGGT TTGTTTTTCGTGTTTTCGGTGCATAGCGATCCGAATTCGATGAGCCAGCA CCGCCCTCCTTCTCCGGGTACCGATCAAGTCCAACCAGCAAGGGATGGTC TCGTATCGTGGCCGCAGGCCACTCACCAAGAGTGCTTAAGGGTGCCAAAC AGCCAAGATCCAAGCGCACAATGTATGGACTATTCCCCAGAGTCTCGCTT CCAACCGCGAGAAAGAAATGAGCGGTAAACTGCGCTCTCGCTGCAAGAGC AAGTGCCTATGAGATCGTGTTTACAAAGTGTCAACATTGTTGCTCTGCCT TTTGCATGTAAGATGTCGGGGGTGCAGATGTCCTCTTGTGCGGCGTAAGA ATGCTTTGAGGTTATTATGTCCTGTCCAATGTCCTTCCTGGTAGCAAGCA GGGTGGACGAAAGATATCCGGGCGCGAACATCCAAATTTGTGTGCTGCGC TGTTTCCTTGCCGCAGGCGAGGCTTACGACGCGTGGCCAACGGAGGGCGG GCATGCGGAGATGTCCCCGAGGGACGACCTTGAGTACGACCTCATGAAGG CAAGTGCAGGGGCACACCTCGGGAGCAGCACGCGCTGATATAATTTTCTT GCAACACAAAACAGACAGAGGCTGTTCGCACGCGATTGGCGAGAAGAAAG TTTTTACGCTGATCTATTTTGGAAAATCAGCGGCGTTTTTTCTATGCCGG GTGCGGCGGCACCATGGGCAGGAGGCAGAAAATCACTGCTGCTGGTGCCG AAGTACGGTCTGAAAGGAGCGTGGTGTGATGCCTTATCTTGGGCTTTTGC TTGTCGATGACGCCAGCGAAGAGCGAGCGGCGGAATCACGCACGTGCCAC AGGAATTGCACGGGGCGTTTATTGTCGCAAGCGATCGTTGAACGTTACAC GCTGGCTGCCTGTGTGACTGCATGCGTATCCTGCGGTAAAGGCAAGGCGG CGAAGTGGTGGTTGGAATGAACACGGATAGCCAGTGTTCTCGGCAGTGTG CGCGGTGGAAGTTCGCGATTCATCGCTTTAAGTACAATCGCATTAAAATC GCATTGAAATTGTCAACCTCTCAACCATAAGCAACTGGCTGACGTATGTA TGACCAACAACAACAATGCCAATAACCAACCGCAGTTCATCATGAAAGCG TACGACATAAGCCGCGTGTCCGTGGAGCGCGTAGCGAGCGGCACCGGCCT CGTCAATGTCTACAACTTTCTGGCGCAAGCCTTCCCAGACAGAGTCGACA AGACCGCGCACGAAGGTGAGAGAAGATCGGCCGAGCCATACCACAGACGG CATGGGATCTGTCTCGGCGTATGTAGGCGGGCGTCGTATTTATGGCAAGG CGGGCCTGCATCTACATTTGTGTAGTCTTGAAAGGCTCGGTTGGACAGTT GAAATCGCTGCACACGTCGTGCCGAATGCGTGTGTACTCCAAGGCCAAAC AAAGTCTGTGCTTTCATCCTTTTGAGCGCGCGCGCGTGTGTGTGTGTGTG TGTGTGTGACCCAACTCGTACTATGGCGTTGCTTGGCTTGTGAACTGCTT TTTCTTGCTGGTTTGTCTTGCTGTGTTTTGTGTCTGCAGCGATCCAAGCG GCGGGAGACCAGAAGGGGGGAGTCATCAGCAAGAACTCTGGTGTGCCAGG ATCCATCTGCGAGCAGGTTTGTTGGTTCGTTGTGGACCTCCGCCGCCCAT ATTAGCGTTTAGTGATTGTAAATGACGATATAGAATCACTAGCTTCGTAT CCGTCTCCTGTAACGTTGCCGAAAATTAGCACGAGTTCGTCACTCCTCGT TGTACACACATACGGCCCAACTAATGAGAATCCGTCGGTCCCGTAATTCT GTTGTGTCGATGTTTTGATGGCATCGGCCAGATAGAACATTCGAAAAAGG GTGTCTTCGTATGTTTGTGTGGGTTGTTGTTGTTGTTGTTTCTCACATTA GCCCTCTAGTCCAAAAGCATCCATGGGGGCCCGTGGTCATAAAACACAGG GCACCCTCGACGCCGCTGAAGAAAAAGTAAAAAAAAACTATAGACACGTA CATAAGCGCCAGGCAATACTAGACTGGCTCCCGGAGGGGTCTTGCATCTT GCTGGCACCAAAAAAACGCGCTGTTTTTGGGGATGGCGAGGGGGGGGGGG GGATCGGCACGTTGTACTTACGGTAGGGACCTAGTGGTGCCGACGCGTAA CGGCCGGTCCGGGAGGTCGGGCATGAGATGAGACTCTGATGTTCAATGCC ATATTTAGACAGAGAAAAGGTAACAGTGCTGTTGCTCACCTCTGCCCCCC CCCGACCTGCTGGCATGCATGGCACACGCGACTTCGCGGTGTACCCGCTA AGACCATACGTACCCCGCTCCTGTCCTCTCTCTCTATCTCTCTCTTGCAC GGTCTATGGCTTAAGAGCCGGGGTCAGGCACGTAACTTTTGTCTCCCCGA GGCCCACCGGATTGGTTCTGAAAATAAGCATAATAGGAACCATGGAAGTA TAATTTTGAGTTCACAGCATCTGGCACAACAGCAGTTAGTTCAGGGTTCC CGTCTCCTAGTCACCCTCCCCGACACTGCTGTTTTCCTTCTGCGTCGCAT GCCTCACACAAGCGTCCTCTTCCTTCGCGTCTCTGCCTCTCAGGTGCTGG AGATATGGGCGACGCACTACGGCGCGGAGGCGGGGGTGATGGGGCTGCGC TGCATCCCCACCGGGGGGCTCTTCCTCGCAGGAGGCATGACGCACAAGCT CATCCACCTTATTCAGGTGTGCCTTTCGGGGCGAAACCCACCATGCTTTG TACCTGCATGCGAACATACGGGCCAAAATACAAACGCCGAACAAAATTCC AAAAGGGGCGGGGGGGGGGGGGGGGGATTGAAACGGTTTTCAAAGCTTGG AGGCCGAGTGCCTCCTTGTGCGCGCGGTGACACTATTGTTTGGACGTTAC CATGCGGTATGGGCTGCACTTTGTGTCCTGCTGCCGCCTTTTTTGCTCGC GCCACACCGGCTGAGAGGCGGCCGGCGGTGGGAGCAAGGGGGGAAAGCAT GCGACATGTGATTTCTCGCGAGTGAGTTTTCCGCTTTTTCATTTTCTCCC TCCCGCCGCCCCGACGTTTGTTGTCGGAACTCTCGCATCCACATCATCCA ATGGACTCAAGGGAGCGGACAGCCCGTTCATGAAGGGTTTCTACGACAAG GGGCGCGTGTCCGGGCTGCTTAAGGCGGTGCCGGTGTACGCCGTGCTGGT GGAGGACATCGGCCTCAGAGGGGCCCACTTCGTCGCGATGAGGGTGAGAA TTCGACTTCGACGCAAGAGAGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG GGTTGGGGGGGGGGCGCACCCCGCCCCTTGGAGGGGAGGAGCCCCCCTCG AAACCCCCGCCCCCCNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC AGTGAGGCGTTTGTCGGGGGGCGCAACTCGACGCTTTGTGGGTGTCAGCG TGGGTGTCGGCGTGAGCACGTGGGTGTAGCTCGACTACGCAGCTTCGTTC TTTTGCGGTGCGTGCTCTCAGGCCGCAGTTCGCAGTCGCGATGTAGTTTT TTTTTCTGCTTTTTTTTTGCGGTAGACATGTATTGGTTCGCGTGTGTGTC TCCCCCCCGATTTCCAGTTTTTCACCTTACATACATAGGCTGATGTTTCG GTGAATATCAGAAGAAAAACAAGATAGAAAAACGCGGTAACACAAGGTTA CCACCACCTCATGCGAAAGGATGAAACAATGTGTAACCAAACTCCCGCAA CTTCCGCCCGTCCCACGCCGACAGCTTCACCACGAACAGCACGAGGAGGA GTACAAGAAGCATCACTTGCAAAAGGTCGTGGCATTTTCCGCGACGAGCA TGGTCGCTTTGGCGGCTTTGGCGGCGGTGGTCGGCGCGGCCGTCGCACGC GCGATGTCCAGGCGCTGAAACAACAGGGATTTGTTTGTGCCTGCCATCGT TGTCGTCGGCGAGGTGTTCGACCCCCCCCCCCCTCACCCACCCGACTGCT TGCCGCATGTGAACGTCGAAGCTACTCTCCGTTCTCCTGACGAGACGCTC GCCGT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1108:2971..10975+

>mRNA_L-elsbetiae_contig1108.970.1 ID=mRNA_L-elsbetiae_contig1108.970.1|Name=mRNA_L-elsbetiae_contig1108.970.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig1108:2971..10975+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACCAATCGCAACTGGGTTGTCGAGGGCGCCGAGATGACCAATCGCAA
CTGGGTTGTCGAGGGCGCCGAGATCGCGGAGAGGTTCAATATCGCCCGGG
TGCGGCTGGTCAACGACTTCGTGGCCGCCGGGTACGGTCTGCTCACGCTC
GACATCGACACGGAGTGCGCCACGGTGCAGATCGCGGAGAGGTTCAATAT
CGCCCGGGTGCGGCTGGTCAACGACTTCGTGGCCGCCGGGTACGGTCTGC
TCACGCTCGACATCGACACGGAGTGCGCCACGGTGCAGGCCGGCGAGCGC
AAGCAGGGGGCGCCGATCGCGTGCATCGGCTCCGGTACTGGGCTGGGAGA
GACGTTCTTGACCTGCCCTATGGGAGGCCGGCGAGCGCAAGCAGGGGGCG
CCGATCGCGTGCATCGGCTCCGGTACTGGGCTGGGAGAGACGTTCTTGAC
CTGCCCTATGGGAGGCGAGGCTTACGACGCGTGGCCAACGGAGGGCGGGC
ATGCGGAGATGTCCCCGAGGGACGACCTTGAGTACGACCTCATGAAGGCG
AGGCTTACGACGCGTGGCCAACGGAGGGCGGGCATGCGGAGATGTCCCCG
AGGGACGACCTTGAGTACGACCTCATGAAGTTCATCATGAAAGCGTACGA
CATAAGCCGCGTGTCCGTGGAGCGCGTAGCGAGCGGCACCGGCCTCGTCA
ATGTCTACAACTTTCTGGCGCAAGCCTTCCCAGACAGAGTCGACAAGACC
GCGCACGAAGTTCATCATGAAAGCGTACGACATAAGCCGCGTGTCCGTGG
AGCGCGTAGCGAGCGGCACCGGCCTCGTCAATGTCTACAACTTTCTGGCG
CAAGCCTTCCCAGACAGAGTCGACAAGACCGCGCACGAAGCGATCCAAGC
GGCGGGAGACCAGAAGGGGGGAGTCATCAGCAAGAACTCTGGTGTGCCAG
GATCCATCTGCGAGCAGCGATCCAAGCGGCGGGAGACCAGAAGGGGGGAG
TCATCAGCAAGAACTCTGGTGTGCCAGGATCCATCTGCGAGCAGGTGCTG
GAGATATGGGCGACGCACTACGGCGCGGAGGCGGGGGTGATGGGGCTGCG
CTGCATCCCCACCGGGGGGCTCTTCCTCGCAGGAGGCATGACGCACAAGC
TCATCCACCTTATTCAGGTGCTGGAGATATGGGCGACGCACTACGGCGCG
GAGGCGGGGGTGATGGGGCTGCGCTGCATCCCCACCGGGGGGCTCTTCCT
CGCAGGAGGCATGACGCACAAGCTCATCCACCTTATTCAGGGAGCGGACA
GCCCGTTCATGAAGGGTTTCTACGACAAGGGGCGCGTGTCCGGGCTGCTT
AAGGCGGTGCCGGTGTACGCCGTGCTGGTGGAGGACATCGGCCTCAGAGG
GGCCCACTTCGTCGCGATGAGGGGAGCGGACAGCCCGTTCATGAAGGGTT
TCTACGACAAGGGGCGCGTGTCCGGGCTGCTTAAGGCGGTGCCGGTGTAC
GCCGTGCTGGTGGAGGACATCGGCCTCAGAGGGGCCCACTTCGTCGCGAT
GAGGCTTCACCACGAACAGCACGAGGAGGAGTACAAGAAGCATCACTTGC
AAAAGGTCGTGGCATTTTCCGCGACGAGCATGGTCGCTTTGGCGGCTTTG
GCGGCGGTGGTCGGCGCGGCCGTCGCACGCGCGATGTCCAGGCGCTGACT
TCACCACGAACAGCACGAGGAGGAGTACAAGAAGCATCACTTGCAAAAGG
TCGTGGCATTTTCCGCGACGAGCATGGTCGCTTTGGCGGCTTTGGCGGCG
GTGGTCGGCGCGGCCGTCGCACGCGCGATGTCCAGGCGCTGA
back to top