prot_L-elsbetiae_contig10995.889.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10995.889.1
Unique Nameprot_L-elsbetiae_contig10995.889.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length80
Homology
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5JK49_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK49_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.880e-6
Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   39 KVVRALYGVEQSGREWGNEAADTLIQNGCRSETASP 74
            KV RALYG++QSGREWG E AD LI+NGC      P
Sbjct:  426 KVERALYGLKQSGREWGFEVADALIENGCEQCRVDP 461          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5JUB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB8_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 3.920e-6
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0
Query:   21 PGGAGSRSTCSAPQRLDTKVVRALYGVEQSGREWGNEAADTLIQNGCRSETASP 74
            P G G +S       + TK  RA+YG++QSGR+WG  AADTL++NG     A P
Sbjct:  377 PAGCGDKS------HMITKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADP 424          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5L5Z2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z2_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 3.980e-6
Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 0
Query:   39 KVVRALYGVEQSGREWGNEAADTLIQNGCRSETASP 74
            KV RALYG++QSGREWG EAADTLI NG     A P
Sbjct:  393 KVERALYGLKQSGREWGFEAADTLIANGYEQCRADP 428          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5L9H4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9H4_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 7.200e-6
Identity = 24/36 (66.67%), Postives = 27/36 (75.00%), Query Frame = 0
Query:   39 KVVRALYGVEQSGREWGNEAADTLIQNGCRSETASP 74
            KV RALYG++QSGREWG EAAD LI+NG     A P
Sbjct:  333 KVERALYGLKQSGREWGFEAADALIENGYEQCRADP 368          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5JC05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC05_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 7.500e-6
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0
Query:   39 KVVRALYGVEQSGREWGNEAADTLIQNG 66
            KV RALYG++QSGREWG EAAD LI+NG
Sbjct:   76 KVERALYGLKQSGREWGFEAADALIENG 103          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 9.790e-6
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   30 CSAPQRLDTKVVRALYGVEQSGREWGNEAADTLIQNG 66
            CS+      K+ RALYG++QSGREWG EAAD LI+NG
Sbjct:   67 CSSMSGKVVKIERALYGLKQSGREWGFEAADALIENG 103          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5JNJ1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ1_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 9.870e-6
Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   39 KVVRALYGVEQSGREWGNEAADTLIQNGCRSETASP------GW 76
            KV RALYG++QSGREWG EAAD LI+NG       P      GW
Sbjct:  402 KVERALYGLKQSGREWGFEAADALIENGYEQGRVDPCLPEGGGW 445          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 1.010e-5
Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 0
Query:   21 PGGAGSRSTCSAPQRLDTKVVRALYGVEQSGREWGNEAADTLIQNGCRSETASP 74
            P G G +S      R   K  RA+YG++QSGR+WG  AADTL++NG     A P
Sbjct:  503 PAGCGDKS------RKTLKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADP 550          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5KBK7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK7_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 1.030e-5
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:   30 CSAPQRLDTKVV---RALYGVEQSGREWGNEAADTLIQNG 66
            C   Q +  KVV   RALYG++QSGREWG EAAD LI+NG
Sbjct:  808 CDVKQAMSGKVVKVERALYGLKQSGREWGFEAADALIENG 847          
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Match: A0A6H5KKQ0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ0_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 1.170e-5
Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = 0
Query:   39 KVVRALYGVEQSGREWGNEAADTLIQNG 66
            KV RALYG++QSGREWG EAAD LI NG
Sbjct:   47 KVERALYGLKQSGREWGFEAADALISNG 74          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10995.889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK49_9PHAE2.880e-663.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUB8_9PHAE3.920e-646.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5Z2_9PHAE3.980e-669.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L9H4_9PHAE7.200e-666.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC05_9PHAE7.500e-678.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXU1_9PHAE9.790e-662.16Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JNJ1_9PHAE9.870e-656.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K164_9PHAE1.010e-546.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBK7_9PHAE1.030e-562.50CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KKQ0_9PHAE1.170e-578.57Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10995contigL-elsbetiae_contig10995:3117..4146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10995.889.1mRNA_L-elsbetiae_contig10995.889.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10995 3074..4146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10995.889.1 ID=prot_L-elsbetiae_contig10995.889.1|Name=mRNA_L-elsbetiae_contig10995.889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
MRSALLRWRSALKWKKQKQKPGGAGSRSTCSAPQRLDTKVVRALYGVEQS
GREWGNEAADTLIQNGCRSETASPGWTSL*
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