prot_L-elsbetiae_contig1004.85.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1004.85.1
Unique Nameprot_L-elsbetiae_contig1004.85.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length314
Homology
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: D8LQB9_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB9_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 1.230e-170
Identity = 264/291 (90.72%), Postives = 279/291 (95.88%), Query Frame = 0
Query:    1 MVASLSNQLTQSTQPNGPASPG---GPNAGAESGVPASQGGVDTALAVQAALRQEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEHILVADG 288
            MVASLSNQLTQS+QPNGPASPG   G + G   GVPASQGG+D ALAVQAALR+EEANESQSMADFLK LV+ TLTDKVLETVPAIKKYSGSGPDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEG YSDPCVSFVLPDVIC+FCNLCRDLDLCRD+RLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDM+C+KCG+VATRSMS+TCPCSGPLVAEESQ+DFHKTM+LLRQLA+FHSFGWLLETVE+ILVADG
Sbjct:  720 MVASLSNQLTQSSQPNGPASPGTDRGESGGG--GVPASQGGMDAALAVQAALRKEEANESQSMADFLKHLVTRTLTDKVLETVPAIKKYSGSGPDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGQYSDPCVSFVLPDVICSFCNLCRDLDLCRDARLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMKCAKCGAVATRSMSLTCPCSGPLVAEESQQDFHKTMKLLRQLAIFHSFGWLLETVENILVADG 1008          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: A0A6H5J9K7_9PHAE (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K7_9PHAE)

HSP 1 Score: 499 bits (1284), Expect = 2.020e-161
Identity = 257/289 (88.93%), Postives = 274/289 (94.81%), Query Frame = 0
Query:    1 MVASLSNQLTQSTQPNGPASPGGPNAGAESG-VPASQGGVDTALAVQAALRQEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEHILVADG 288
            MVASLSNQLTQ +QPNGPA PG    G+  G VPASQG +D ALAVQAALR+EEANESQSMADFLK LV+ TLTDKVLETVPAIKKYSGSGPDAFP+KPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEG YSDPCVSFVLPDVIC+FCNLCRDLDLCRD+RLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDM+C+KCG+VATRSMS+TCPCSGPLVAEESQ+DFHKTM+LLRQLA+FH+FGWLLETV +ILVADG
Sbjct: 1295 MVASLSNQLTQWSQPNGPAPPGTDRGGSGGGGVPASQGEMDAALAVQAALRKEEANESQSMADFLKHLVTRTLTDKVLETVPAIKKYSGSGPDAFPNKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGQYSDPCVSFVLPDVICSFCNLCRDLDLCRDARLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMKCAKCGAVATRSMSLTCPCSGPLVAEESQQDFHKTMKLLRQLAIFHNFGWLLETVANILVADG 1583          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: A0A7R9U2Y1_9STRA (DNA polymerase epsilon catalytic subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Y1_9STRA)

HSP 1 Score: 203 bits (516), Expect = 5.090e-59
Identity = 108/235 (45.96%), Postives = 148/235 (62.98%), Query Frame = 0
Query:   51 QEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEHILV 285
            Q E +  + +  + KDLVS  LT + LE V  I +++ +GP++FP+  G+ REL NPALEF K++ HVL LD    DEV  LR+  LAE+G+R+F     + DP +S+VL D ICTFCN C DLD+CRD+ L     E+RW+C  C+H Y+ ++IEL LVE   RR  RYQLQD RC+K   V +  +S   P  G  V +E  +DF   M+ L + A FH F WL E V++IL+
Sbjct:   92 QGEDDVQKRLVQYTKDLVSTHLTRRCLENVADINRHN-TGPESFPTLAGSHRELENPALEFAKAVTHVLELDKHCADEVVVLRRLLLAELGMREFGKNATWEDPSMSYVLRDTICTFCNACVDLDICRDASLCTGPWEDRWRCKNCSHRYDTAAIELRLVEDCNRRVTRYQLQDRRCAKTKKVESNVLSERSPSGGEYVLDEPPEDFELVMRTLLRAARFHDFKWLQEVVKNILL 325          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: A0A7S4D5R4_HETAK (DNA polymerase epsilon catalytic subunit (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5R4_HETAK)

HSP 1 Score: 188 bits (478), Expect = 1.290e-54
Identity = 92/200 (46.00%), Postives = 134/200 (67.00%), Query Frame = 0
Query:   53 EANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGV-RQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAE 251
            EA+ ++ +  ++K  V+   T K+LE    I +Y+ +GP+ FP  PG+  +L+NPALEF KS+C V +LDP +  EV+ LR+Q LA +G  R+F A  ++ DPC SFVLPDV C FCNLCRDLDLCRD  ++ E +E+RW+C+ C H  ++  +E  LV   +    RYQLQD+RC++C +VA R ++ TCPC+G    +
Sbjct:   80 EADVAREVERYMKGFVAGRFTKKMLEMTSEIMRYN-TGPECFPVLPGSHLKLSNPALEFAKSVCRVFALDPALAQEVQLLRRQLLAHIGAAREFDAAAVWRDPCASFVLPDVTCGFCNLCRDLDLCRDPAVLGE-KEDRWRCLGCGHSLDKRGVEARLVAHAEALQARYQLQDLRCAQCRAVADRRLAPTCPCAGAFAGD 277          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: A0A7S2AXB9_9STRA (DNA polymerase epsilon catalytic subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXB9_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.800e-51
Identity = 89/176 (50.57%), Postives = 121/176 (68.75%), Query Frame = 0
Query:  108 ALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCP-CSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEH 282
            ALEFIK++CHVLSLD +V DEV+ +R+  LA+VG R+FS+   +  P  SFVLPD+IC  CN CRD+DL RD  +  +  ++ W C  C   ++   +EL LVE VQRRS RYQLQD+RC+KC  VA RSMS  C  CSG L  ++S ++F+  M+++ ++A FH F WL E VE+
Sbjct:   29 ALEFIKTVCHVLSLDTSVEDEVQRMRRALLAQVGHREFSSISTFESPGQSFVLPDLICNHCNSCRDVDLMRDPAVTSDYPDDNWHCNNCGIRHDLDKVELKLVEHVQRRSTRYQLQDLRCTKCHKVAKRSMSQRCSSCSGNLECDDSPEEFNNDMRIMARVAQFHEFHWLQEIVEN 204          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: UPI000719D5BB (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719D5BB)

HSP 1 Score: 185 bits (469), Expect = 8.180e-49
Identity = 104/251 (41.43%), Postives = 155/251 (61.75%), Query Frame = 0
Query:   49 LRQEEANESQ--------SMADFLKDLVSMTLTDKVLETVPAI-KKYSGSGPD---AFPSKPGA-ARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLM-DEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEHILV 285
            +R++ A +SQ        S   F ++L+S  +T ++      I KK SGS  D    FP  PG+   +L +PALEF+K++C VLSLD ++ ++V  +R+  L  VGV +FS E ++ DPC+S+VLP+VIC  CN CRDLDLCRD  L+ D      WQCIQC+  Y+R++IE +L++AVQ +S+ + LQD++C KC +V   +MS  C C+G      SQKDF   M+    +A +++   L ET++ I V
Sbjct: 2002 VRRKRATQSQNIDNTTTPSTVSFSQELISEEMTQRLFSMTQKIQKKLSGSHDDMQDVFPKLPGSHLTDLKSPALEFVKAICQVLSLDASIVNQVTKMRRDLLKLVGVGEFSDEAIFRDPCLSYVLPEVICKVCNHCRDLDLCRDPYLLQDGSNTVAWQCIQCHSEYDRNAIEQALIDAVQSKSMGFVLQDLKCIKCNAVKQLNMSYYCECAGDFTHTVSQKDFTIRMRTFHNIARYYNMELLKETLDWITV 2252          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: A0A1Y1XYP0_9FUNG (DNA polymerase epsilon catalytic subunit n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XYP0_9FUNG)

HSP 1 Score: 177 bits (448), Expect = 5.120e-46
Identity = 96/230 (41.74%), Postives = 135/230 (58.70%), Query Frame = 0
Query:   62 DFLKDLVSMTLTDKVLETVPAIK------KYSGSGPDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDE-EERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEHIL 284
            DF K  +S   T ++L+ VP +       K +  G D FP  PG+  +LTNPALEFIK +C V  LD  +  EV  LR+  L  +GVR+FS E  + +PC S+ L   IC +CN CRD D CRD  L+  D   + W C  C   Y++S IE +LVE +QR++  YQLQD++CSKC  V   +++  C CSG  V  +S+K+ +K + +LR +A  H   +L E VE +L
Sbjct: 1942 DFKKKFISHYFTRRLLKMVPEVVEVFENFKATQGGQDPFPKLPGSYIKLTNPALEFIKYICQVFGLDEDIEREVRILRRNLLDLIGVREFSTEAQFQNPCESYKLMQFICDYCNHCRDFDFCRDPDLLPVDGVPQPWLCPGCRQEYDKSVIEDALVENIQRKTTAYQLQDLKCSKCRLVKAENLTEYCQCSGNFVLTQSRKELNKQLTVLRNIAKLHELEFLGEVVEWLL 2171          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: A0A7S3M754_9STRA (DNA polymerase epsilon catalytic subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M754_9STRA)

HSP 1 Score: 162 bits (411), Expect = 5.840e-45
Identity = 88/235 (37.45%), Postives = 142/235 (60.43%), Query Frame = 0
Query:   58 QSMADFLKDLVSMTLTDKVLETVPAIK-KYS------GSGPDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEHILV 285
            + ++++++ L+    T+K+LE V  ++  YS      G+G   FP + G+  +LT+PALEF+K+  HV++LDP +  EV +LR+  L ++ VR+FS + ++ DPC+S+ L DVIC++C+ CRDLDL RD+ L  ED  +RW+C  C +      +E  L+EAV + +  Y LQD RC     V+ R  +       PLV + S+ +    +++LRQ+A FH F  L   VE ++V
Sbjct:   24 RKVSEYMQTLLRERFTNKMLEIVDELQLAYSHHDLVRGAG-SVFPVRAGSHLQLTSPALEFVKAATHVMALDPLLAQEVASLRRLLLTQLRVREFSVDSVFQDPCLSYTLRDVICSYCSTCRDLDLLRDASLTCEDPAQRWRCRHCQNRINTEEVENRLLEAVDKLNASYLLQDFRCRSSHRVSRRLGTAVSDLCDPLVMDVSRDEALNRLKVLRQVATFHKFSLLQTAVEELMV 257          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: A0A7L3YAW8_9AVES (DNA polymerase epsilon catalytic subunit (Fragment) n=7 Tax=Neognathae TaxID=8825 RepID=A0A7L3YAW8_9AVES)

HSP 1 Score: 161 bits (408), Expect = 2.750e-44
Identity = 93/232 (40.09%), Postives = 130/232 (56.03%), Query Frame = 0
Query:   60 MADFLKDLVSMTLTDKVLETVPAI-KKYSGSG-----PDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRL-MDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEHIL 284
            M  F +D V+  LT         I KK +GS       D FP  PG+  +L NPALEFIK +C VLSLD  +T++V  LR+  L  + V +FS    + DPC S+VLP+VIC  CN CRDLDLC+D  L  D      W C  C   Y+ ++IE +LVEA+Q++ + + LQD+ C KC  V    M V C C+G      S + F + + + + +A  +   +LLET+E +L
Sbjct:   37 MITFSQDYVANELTQSFFTITQKIQKKVAGSRNATEPSDLFPVLPGSYLQLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSYVLPEVICRNCNFCRDLDLCKDPALSQDGSVLPSWVCSNCQAQYDSNAIETALVEALQKKMMAFVLQDLVCKKCHGVKETHMPVYCSCAGDFALTISSQTFMEHVNIFQNIARHYGMAYLLETIEWLL 268          
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Match: Q9H736_HUMAN (DNA polymerase epsilon catalytic subunit n=1 Tax=Homo sapiens TaxID=9606 RepID=Q9H736_HUMAN)

HSP 1 Score: 164 bits (414), Expect = 3.740e-44
Identity = 95/238 (39.92%), Postives = 135/238 (56.72%), Query Frame = 0
Query:   60 MADFLKDLVSMTLTDKVLETVPAI-KKYSGSG-----PDAFPSKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDEE-ERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVAEESQKDFHKTMQLLRQLALFHSFGWLLETVEHILVADGQM 290
            M  F +D V+  LT         I KK +GS       + FP  PG+   L NPALEFIK +C VLSLD  +T++V  L +  L  V V +FS E  + DPC S+VLP+VIC  CN CRDLDLC+DS   ++     +W C  C  PY+ S+IE++LVE +Q++ + + LQD+ C KC  V   SM V C C+G        + F + + + R +A  +   +LLET+E +L  + Q+
Sbjct:  131 MITFSQDYVANELTQSFFTITQKIQKKVTGSRNSTELSEMFPVLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSCNFCRDLDLCKDSSFSEDGAVLPQWLCSNCQAPYDSSAIEMTLVEVLQKKLMAFTLQDLVCLKCRGVKETSMPVYCSCAGDFALTIHTQVFMEQIGIFRNIAQHYGMSYLLETLEWLLQKNPQL 368          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1004.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQB9_ECTSI1.230e-17090.72DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A6H5J9K7_9PHAE2.020e-16188.93DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A7R9U2Y1_9STRA5.090e-5945.96DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]
A0A7S4D5R4_HETAK1.290e-5446.00DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A7S2AXB9_9STRA2.800e-5150.57DNA polymerase epsilon catalytic subunit n=1 Tax=F... [more]
UPI000719D5BB8.180e-4941.43DNA polymerase epsilon catalytic subunit A-like n=... [more]
A0A1Y1XYP0_9FUNG5.120e-4641.74DNA polymerase epsilon catalytic subunit n=1 Tax=B... [more]
A0A7S3M754_9STRA5.840e-4537.45DNA polymerase epsilon catalytic subunit n=1 Tax=S... [more]
A0A7L3YAW8_9AVES2.750e-4440.09DNA polymerase epsilon catalytic subunit (Fragment... [more]
Q9H736_HUMAN3.740e-4439.92DNA polymerase epsilon catalytic subunit n=1 Tax=H... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 47..284
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 47..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1004contigL-elsbetiae_contig1004:1722..6665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1004.85.1mRNA_L-elsbetiae_contig1004.85.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1004 422..7493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1004.85.1 ID=prot_L-elsbetiae_contig1004.85.1|Name=mRNA_L-elsbetiae_contig1004.85.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=314bp
MVASLSNQLTQSTQPNGPASPGGPNAGAESGVPASQGGVDTALAVQAALR
QEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPSKPGA
ARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGL
YSDPCVSFVLPDVICTFCNLCRDLDLCRDSRLMDEDEEERWQCIQCNHPY
ERSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRSMSVTCPCSGPLVA
EESQKDFHKTMQLLRQLALFHSFGWLLETVEHILVADGQMDAHREEEEEE
GLDAEVDAMQEGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029703POL2