mRNA_L-elsbetiae_contig10931.846.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI) HSP 1 Score: 349 bits (895), Expect = 1.950e-114 Identity = 201/234 (85.90%), Postives = 208/234 (88.89%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 702 TEIMDLSEESKEAQQEHARLL+QVE++RRARTMVVPTKTEDVA KLR LGQPVRLFSENVADIRERLRRFIAASEMEDEE EKI+GMVAPKPSFVPR+MQMGGE AAG XXXXX PPAAKK EVVYTPASDALLEARAAIATMSF RAK RLAGAKRRRG PEE A+DR+A ET STMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE Sbjct: 72 TEIMDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXX------------PPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 293
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.950e-40 Identity = 105/236 (44.49%), Postives = 138/236 (58.47%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAK--KAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 702 TE+M+LS S+E Q +HA +LR+VE+ RRARTM VPT E+VA LR LGQP+RLFSE +AD+RERLR +A +++ E + ++A PA AA A + KAEVVYT A+ L+EAR IA+ SFA A RLA AKRRR A A D A + +K L IN S D+RPLSA++VSPDG VAS +W+ + KLW+++ Sbjct: 49 TEVMELSAASREEQDKHAEMLRKVEAHRRARTMAVPTLPEEVARALRRLGQPIRLFSETLADVRERLREHLAQLQLDGEGDAAVASLLAA------------------------------AEPAKAAAAAVEEGKAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMK 254
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: G4ZDF0_PHYSP (SFM domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZDF0_PHYSP) HSP 1 Score: 122 bits (305), Expect = 2.200e-28 Identity = 92/239 (38.49%), Postives = 134/239 (56.07%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAE--VVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 702 TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT E+V +LR LG+P+ LF E AD RERLR ++ E+E EET + ++A + Q GG A GAA A+K E + Y P +D L ARAA+ T S A+ + +++ A E A +D A E +T +A +SQ D RPL++++ S DG VA+GSW+ LVK+WD Sbjct: 54 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLADI------QKQDGGAGAPAEGTAAGDE--------GAAGQASKPQEDQLFYVPIKNDGLKTARAAVFAHTTSVVGARLKRERQEKQMSAEERARTMDHHAAELYATALRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWDAN 278
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A662XLR5_9STRA (SFM domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLR5_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.290e-28 Identity = 101/237 (42.62%), Postives = 143/237 (60.34%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAP--KPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPASDALLE-ARAAIATMSFARAKGRLAGAKRRR--GAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696 TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT ++V +LR LG+PV LF E AD RERLR ++ E+E EET + ++A K P GE AA XXXXXXXXXXX ++ ++ Y P + L+ ARAAI S + RL ++ + A E A+DR A E +T +A +SQ D RPL++++ SPDG VA+GSW+ LVK+WD Sbjct: 60 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVDEVIRRLRQLGEPVTLFGERPADRRERLRELLSRLELEAEETGFVHQVLADIQKQGSAPGA----GEEAAXXXXXXXXXXXXKP----------QEDQLFYVPIKNVELKNARAAIFAHSVSAGSARLKRERQEKQLSAEERTRAVDRHAAELYATAAKMANIASQNGDVRPLASVRYSPDGAHVATGSWSSLVKVWD 282
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A2P4X876_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X876_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.610e-28 Identity = 86/238 (36.13%), Postives = 136/238 (57.14%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMG-GEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 702 TE+++LSE S+ AQ++HA+LLR++E+E+RAR + VPT E+V +LR LG+P+ LF E AD RERLR ++ E+E EET + ++A ++ ++G G +G P ++ ++ Y P ++ L ARAAI T + A+ + +R+ A E A +D+ A E +T +A +SQ D RPL++++ S DG VA+GSW+ LVK+WD Sbjct: 54 TEVLELSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLADI-----QKQEVGTGAGESGAATREERRAGRYTKP--------QEDQLFYVPIKNEKLKSARAAIFAHTTTVVGARLKRERQERQMSAEERARTVDQHAAELYATALKMANIASQNGDVRPLASVRFSADGNHVATGSWSSLVKVWDAS 278
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A3R7GQX6_9STRA (SFM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQX6_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.390e-27 Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAP--KPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696 TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT E+V +LR LG+P+ LF E AD RERLR ++ E+E EET + ++A K VP GGE AG ++ E+ Y P +D L + RAAI T S A+ + +++ E A +D A E +T +A +SQ D RPL++++ S DG VA+GSW+ LVK+WD Sbjct: 57 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLRGILSQLELEAEETGFVHQVLADIQKQGAVPG----GGETIAGETGAEADQSDKP-----------QEDELFYVPIKNDQLKKVRAAIFDHTTSIVGARLKRERQEKQMSEEERARTVDHHAAELYATTLRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWD 278
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: W2R6V2_PHYPN (SFM domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R6V2_PHYPN) HSP 1 Score: 117 bits (292), Expect = 1.320e-26 Identity = 91/237 (38.40%), Postives = 131/237 (55.27%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAE--VVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696 TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT E+V +LR LG+P+ LF E AD RERLR ++ E+E EET + ++A + Q G AAG GAA A K E + Y P ++AL RA I T S + + ++R E A +D A E +T +A +SQ D RPL++++ S DG VA+GSW+ LVK+WD Sbjct: 54 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHEVLADI------QRQDAGAGAAGAE--------------GAARKATKPQEDQLFYVPIKNEALKGVRATIFAHTASVVGTRLKRERQEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWD 270
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE) HSP 1 Score: 117 bits (292), Expect = 1.350e-26 Identity = 85/235 (36.17%), Postives = 129/235 (54.89%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTP-ASDALLEARAAIATMSFARAKGRLAGAKRRRG--APEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696 TE+++LSE S+ AQ++HA+LLR+VE+E+RAR + VPT E+V KLR LG+P+ LF E AD RERLR ++ ++E EE ++ + G E AAG A ++++ Y P ++ + + RA I + + RL ++ R A E A +D+ A S + +A +SQ D RP+SA++ S DGG VA+GSW+ LVK+WD Sbjct: 51 TEVLELSESSRAAQEKHAQLLRRVEAEKRARNVAVPTVVEEVIRKLRQLGEPITLFGERPADRRERLREILSRLDVEAEENGYVRQVFGDIEKQEIAADAAGDERAAGAGETATGKLSR-----------AHESQLFYVPLTNEKMKKVRATIFAHASSATGARLKRERQERSMSAEERARTVDQYAAGLYSAAQKMANVASQNGDVRPISAVRFSADGGHVATGSWSSLVKVWD 274
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: H3GS79_PHYRM (SFM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GS79_PHYRM) HSP 1 Score: 116 bits (290), Expect = 2.550e-26 Identity = 86/235 (36.60%), Postives = 127/235 (54.04%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIATMSFARAKGRLAGAKRRR--GAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696 TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT E+V +LR LG+P+ LF E AD RERLR ++ E+E EET + ++A +Q G A G VA P + ++ Y P ++ L +AR AI + RL ++ + E A +D A E +T +A SQ D RPL+ ++ S DG VA+GSW+ LVK+WD Sbjct: 51 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNISVPTSVEEVVRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLAD--------VQKQGPGAGGTETGAASEEVVHVAGRAVRP---QMDQLFYVPLKNEKLKKARTAIFAHASTVVGARLKRERQEKQMSVEERARTVDHHAAELYATALKMANIGSQNGDVRPLAGVRYSADGAHVATGSWSSLVKVWD 274
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A3F2S1S9_9STRA (SFM domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1S9_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.080e-26 Identity = 88/237 (37.13%), Postives = 131/237 (55.27%), Query Frame = 1 Query: 1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAP--KPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696 TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT E+V +LR LG+P+ LF E AD RERLR ++ E+E EET + ++A K VP G E AG ++ E+ Y P ++ L + RAAI T S A+ + +++ E A +D A E +T +A +SQ D RPL++++ S DG VA+GSW+ LVK+WD Sbjct: 57 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLRGILSQLELEAEETGFVHQVLADIQKQGAVPG----GDETTAGETGAEADQSDKP-----------QEDELFYVPIKNEQLKKVRAAIFDHTTSIVGARLKRERQEKQMSEEERARTVDHHAAELYATTLRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWD 278 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10931.846.1 >prot_L-elsbetiae_contig10931.846.1 ID=prot_L-elsbetiae_contig10931.846.1|Name=mRNA_L-elsbetiae_contig10931.846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVback to top mRNA from alignment at L-elsbetiae_contig10931:2710..6451+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10931.846.1 ID=mRNA_L-elsbetiae_contig10931.846.1|Name=mRNA_L-elsbetiae_contig10931.846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3742bp|location=Sequence derived from alignment at L-elsbetiae_contig10931:2710..6451+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10931:2710..6451+ >mRNA_L-elsbetiae_contig10931.846.1 ID=mRNA_L-elsbetiae_contig10931.846.1|Name=mRNA_L-elsbetiae_contig10931.846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig10931:2710..6451+ (Laminarionema elsbetiae ELsaHSoW15)back to top |