mRNA_L-elsbetiae_contig10039.84.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 148 bits (373), Expect = 9.080e-40 Identity = 78/163 (47.85%), Postives = 105/163 (64.42%), Query Frame = 1 Query: 7 SPAVVTKTVTSDKFRLVFLAGLEGAGHHYVMAADSAMFSMNPDLPRISKDEELDVTPYYLPNVLGGDASRYAQAEDTARNEMRRLAEHAAGLPLPGSVYVLHNSWSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHRDFQDGLG 495 S A++ KT SD FRLVF+AGLEG GHHYVM A++++F N +LPR ++ YY P +G + ++ + A MRRLAE AA L PG++ SYP G KVMQY+DL IA+ AE +G+D RVLYLRRSA+++++ANTVHR F +G Sbjct: 135 STAILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNLPR-RYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMG 296
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 104 bits (259), Expect = 1.590e-25 Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 1 Query: 115 MFSMNPDLPRISKDEEL-DVTPYYLPNVLGGDASRYAQAEDTARNEMRRLAEHAAGLPLPGSVYVLHNSWSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHRDFQDGLGSSPSS 510 MF +PDL R DE+L + +++ + ++ + + R++MR LA+ A LP PG+V ++ SYP G KV QY+DL+ +A+ AE GVD+RVLY++RSA+++L+A+TVHR FQ+ LG SS Sbjct: 1 MFKAHPDLVRF--DEKLPNFWKFFISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQNFLGDIDSS 131
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 1.760e-17 Identity = 62/168 (36.90%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 10 PAVVTKTVTSDKFRLVFLAGLEGAGHHYVMAADSAMFSMNPDLPRISKDEELDVTPYYLPNVLGGDASR--YAQAEDTARNEMRRLAEHAAGLPLPGSVYVLH---------NSWSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHRDF 480 P VV K S + R+VFL GLEG GHHY+ AD D R K L V L L SR Y A R EM +LA G V+ SYP + G K +QY+D + +A+ AE +GVDMR +YL RSA DIL +++ H ++ Sbjct: 96 PVVVEKKAVSSRMRVVFLVGLEGTGHHYM--ADVLEDVCKKDKVRCPK---LCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNY 258
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 8.280e-17 Identity = 51/166 (30.72%), Postives = 80/166 (48.19%), Query Frame = 1 Query: 10 PAVVTKTVTSDKFRLVFLAGLEGAGHHYVMAADSAMFSMNPDLPRISKDEELDVTPYYLPNVLGGDASR-YAQAEDTARNEMRRLAEHAAGLPLPGSVYVLH--------NSWSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHRDF 480 PAVV K S + R++FL GLEG GHHY + +F + + P++ + Y +A R E+ LA + A G + S+P + G +K +QY+D + +A+ AE +GVD+R +YL RSA+ ILV++T H + Sbjct: 55 PAVVEKKTVSSQLRVMFLVGLEGTGHHYFLN----VFDDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHY 216
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 78.6 bits (192), Expect = 5.310e-14 Identity = 60/182 (32.97%), Postives = 88/182 (48.35%), Query Frame = 1 Query: 16 VVTKTVTSDKFRLVFLAGLEGAGHHYVM------------AAD-------------SAMFSMNPDL--PRISKDEELDVTPYYLPNVLGGDASRYAQAEDTARNEMRRLAEHAAGLPLPGSVYVLHNSWSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHRDF 480 ++ K V ++RL+F+AGLEG+GHH + AAD ++S L PR +K E Y P S + +AE R +RRL+ A PL S+ SYP +PGK K+ Q D++ +A++AE+ GVD R+L L R A +L + T+HR F Sbjct: 98 LLPKRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARRCAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWE-----YAPPGAKW--LSGFRRAEGEVRTALRRLSRRNATSPLLASLGGC-GMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHF 271
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: A0A7S3W283_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W283_9SPIT) HSP 1 Score: 70.5 bits (171), Expect = 1.290e-11 Identity = 52/168 (30.95%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 19 VTKTVTSDKFRLVFLAGLEGAGHH--YVMAADSAMFSMNPDLPRISKDEELDVTPYYL---PNVLGGDASRYAQAEDTARNEMRRLAEHAAGLPLPGSVYVLHNS----WSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHRDFQDGLG 495 V K S+ R VF+AGLEG GHH + M A S S +L + D D+ L +++ + + A+ + + RL A + P S+ + +N+ SYP G + M + DL+ +A++AE +GVD+RVL R A D+L++ +H F++ G Sbjct: 63 VRKQQFSNTVRFVFVAGLEGTGHHLWHAMLAGSCARS---NLCANASDTLSDLIADKLHRKKSIMFSERASGRDAQLVEQKLVERLKIAARTVTSPTSLIIQNNALGGQMSYPDSVGTDVQMHHPDLRLLAELAEIAGVDLRVLLSMRGATDVLISTMIHHPFRNQKG 227
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 4.340e-9 Identity = 35/97 (36.08%), Postives = 50/97 (51.55%), Query Frame = 1 Query: 217 YAQAEDTARNEMRRLAEHAAGLPLPGSVYVLH---------NSWSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHRDF 480 Y A R EM +LA G V+ SYP + G K +QY+D + +A+ AE +GVDMR +YL RSA DIL +++VH ++ Sbjct: 39 YWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNY 135
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: F0Y634_AURAN (PPM-type phosphatase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y634_AURAN) HSP 1 Score: 64.3 bits (155), Expect = 7.610e-9 Identity = 58/183 (31.69%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 1 TFSPAVVTKTVTSDKFRLVFLAGLEGAGHHYVMAADSAMFSMNPDLPRISK-DEELDVTPYYLPNVLGGDAS---------RYAQAEDTA-RNEMRRLAEHAAGLPLPGSVYVLH--------------NSWSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHR 474 T P V KTV + R +F+AGLEG+GHH + S MF+M + + D EL +L G+ S R A A+ A R +H P VL+ SYP + +KV+ + D+Q +A MAE +G D+RVL + R A++ LV+ +VHR Sbjct: 25 TTCPHYVKKTVDAPA-RFLFIAGLEGSGHHSL----SNMFAMCVRRRVLCRHDRELG-------QLLHGNRSHPTGIFVYGRQAAADIAALRKRFFARLQHLRDAPRDRGAPVLYLLNVNADGATIPDAGMMSYPNFGPPDKVLHHPDMQTLATMAEAAGADLRVLVVLRGARETLVSTSVHR 195
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: A0A7S3K1J0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1J0_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 8.820e-7 Identity = 42/175 (24.00%), Postives = 76/175 (43.43%), Query Frame = 1 Query: 25 KTVTSDKFRLVFLAGLEGAGHHYVMAADSAMFSMNPDL----------------------PRISKDEELDVTPYYLPNVLGGDASRYAQAEDTARNEMRRLAEHAA---GLPLPGSVYVLHNSWSYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHR 474 K + +DK R +F+AGLEG+GHH + A + + P+ + E++ ++L A++++ + + + H G+ G + SYP + GK K+ + +Q IA AE + VD+R+L L R ++ IL + T +R Sbjct: 244 KRIFNDKIRFIFIAGLEGSGHHALREMFEACHTQGLCITSAQLMRALSNGREHPIGISVYPKDTNTTEINQRRNNFISILKQMATKFSDTSNDTLIILNTMIPHKTEMDGITHSGGI----GMQSYPNFNGKQKIYNHPSIQDIARAAENAKVDLRILVLARPSKAILRSTTKNR 414
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Match: A0A7S2DFF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFF0_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 7.170e-6 Identity = 22/53 (41.51%), Postives = 38/53 (71.70%), Query Frame = 1 Query: 322 SYPTYPGKNKVMQYIDLQRIADMAEESGVDMRVLYLRRSAQDILVANTVHRDF 480 SYP + G +K + ++ ++A +AEE+GVD+R+L L+R A +++V+ T HR F Sbjct: 33 SYPNFGGYDKALHRPNIHQLAMLAEEAGVDLRILVLQRPAHELMVSTTKHRKF 85 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10039.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10039.84.1 >prot_L-elsbetiae_contig10039.84.1 ID=prot_L-elsbetiae_contig10039.84.1|Name=mRNA_L-elsbetiae_contig10039.84.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp TFSPAVVTKTVTSDKFRLVFLAGLEGAGHHYVMAADSAMFSMNPDLPRISback to top mRNA from alignment at L-elsbetiae_contig10039:5585..6638- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10039.84.1 ID=mRNA_L-elsbetiae_contig10039.84.1|Name=mRNA_L-elsbetiae_contig10039.84.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1054bp|location=Sequence derived from alignment at L-elsbetiae_contig10039:5585..6638- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10039:5585..6638- >mRNA_L-elsbetiae_contig10039.84.1 ID=mRNA_L-elsbetiae_contig10039.84.1|Name=mRNA_L-elsbetiae_contig10039.84.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1032bp|location=Sequence derived from alignment at L-elsbetiae_contig10039:5585..6638- (Laminarionema elsbetiae ELsaHSoW15)back to top |