prot_L-elsbetiae_contig10922.838.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10922.838.1
Unique Nameprot_L-elsbetiae_contig10922.838.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length111
Homology
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BLAST of mRNA_L-elsbetiae_contig10922.838.1 vs. uniprot
Match: A0A6H5KLG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG8_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.700e-17
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0 
Query:    1 MNIVSVVTLLAQIATRSAGGVFPCGITSTASHFYVLLCVLPLVLRKSGDSAIWARTIFPSTSVQTLLGTGRPLLATPGSGYRH 83
            MN+  VV   AQ+ATRSA   FPCGIT+T SH YVLLC LPL+LR+SGDSAI+A  + P++       T  PL+AT G  YR+
Sbjct:   50 MNVAWVVAAFAQMATRSAERAFPCGITATLSHLYVLLCTLPLMLRQSGDSAIFATRVSPTS-------TKSPLVATGGRRYRN 125
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10922.838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLG8_9PHAE3.700e-1755.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10922contigL-elsbetiae_contig10922:3453..4519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10922.838.1mRNA_L-elsbetiae_contig10922.838.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10922 3445..4519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10922.838.1 ID=prot_L-elsbetiae_contig10922.838.1|Name=mRNA_L-elsbetiae_contig10922.838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
MNIVSVVTLLAQIATRSAGGVFPCGITSTASHFYVLLCVLPLVLRKSGDS
AIWARTIFPSTSVQTLLGTGRPLLATPGSGYRHNINFSFNRPSSLQRESS
ACEDQDKSASG
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