mRNA_L-elsbetiae_contig1092.835.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: A0A6H5JGE4_9PHAE (Centrosomal protein of 44 kDa n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGE4_9PHAE) HSP 1 Score: 287 bits (734), Expect = 5.460e-86 Identity = 251/393 (63.87%), Postives = 275/393 (69.97%), Query Frame = 1 Query: 256 MASASSSHQNAAKKIKALLRRTHFPVARLRQLPVTSSSLTSG------PSATAGTGGNPWDGIVSGDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMRSHHSLA-QQKSQGGSXXXXXXXXXXXXXXXXXPXXSLSYSGGGWGAKSDHSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQ------------HSRPGSVDSRSSGGGFPAVSPPIPPQPRSPP-LLCAGPIGMVNGGGXHTXXXINAMRNHHPSALSPSAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VPLRAPVSVRAPAPPHHEWHAGNNNGGSAGNSRSFY 1371 MAS+SSSHQNAAKKIKALLRRTHFPVARLRQLP+ +++ SG P+A +G GGNPWDGIVSGDPRAALVVLHWTLLDMSPLFA+LLLDRDYA L S TDFKFV+T+LRMLRDEF+CRPQLTAEQFLTSGFAEVKMRLLA+IVELVMR+HHSLA QQK++ G XXXXXXXXXXXXXXXX P S +G WGAKSDH XXXXXXXXXXXX +SRPGS + RS+ GGF +++PP PQPRSPP LLC PIGMV G X XXX XXXXXXXXXXXXXXXXXXXXXXXXX VPLRAPVSVRA A H+WHAG GG + N R Y Sbjct: 1 MASSSSSHQNAAKKIKALLRRTHFPVARLRQLPLVTAAPPSGGLAPTVPAAASG-GGNPWDGIVSGDPRAALVVLHWTLLDMSPLFATLLLDRDYAGLTSATDFKFVATSLRMLRDEFNCRPQLTAEQFLTSGFAEVKMRLLADIVELVMRTHHSLASQQKNEDGXXXXXXXXXXXXXXXXXAPVPS---AGNCWGAKSDHGSGGRSSGASSPWNTPTPXXXXXXXXXXXXXXXXXXXXXXXXXXYSRPGSAEGRSTAGGF-SIAPP--PQPRSPPPLLCGAPIGMVTGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGRLGGMPSSHRRGGGVPLRAPVSVRATAALQHDWHAG---GGDSSNVRGLY 383
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: D7G0L5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L5_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 1.230e-14 Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1 Query: 481 MSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTA 615 MSPLFA+LLLDRDYA L SLTDFKFV+T+LRMLRDEF+CRPQLT+ Sbjct: 1 MSPLFATLLLDRDYAGLTSLTDFKFVATSLRMLRDEFNCRPQLTS 45
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: A0A7K7VJN5_EUDEL (Centrosomal protein of 44 kDa (Fragment) n=4 Tax=Tinamidae TaxID=8803 RepID=A0A7K7VJN5_EUDEL) HSP 1 Score: 72.4 bits (176), Expect = 3.630e-10 Identity = 36/98 (36.73%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 415 WDGIVSGDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMRSHHSLA 708 + G++ GDP L ++ ++ S A LL+ D EL++ D +F+ ++LRD F +P LT +QFL GFAE KM+++ +I+ LVM+ H L+ Sbjct: 28 YTGLIKGDPAVFLPIISYSFTSFSTYIAELLVKCD-VELSAKNDLRFIEAIYKLLRDLFQYKPILTKQQFLQFGFAERKMQVVCDIINLVMKKHKELS 124
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: A0A830HVN3_9CHLO (Centrosomal protein of 44 kDa n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HVN3_9CHLO) HSP 1 Score: 70.1 bits (170), Expect = 2.470e-9 Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 430 SGDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMRSHHSLAQQKSQGG 729 +GDP A L LH+ LL S A L D Y L +D++FV + ++LR+ F RP LT QFL+ GFAE K+ L+ +++ + H+ L +Q+ G Sbjct: 33 AGDPVALLPALHYVLLGFSRPLARYLADSGY-HLEESSDWRFVESAAKLLREVFRYRPALTPVQFLSHGFAERKVLLVLDVIRVAKAKHNELLRQRHAAG 131
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: A0A2R5GVL2_9STRA (Centrosomal protein of 44 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVL2_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 5.910e-9 Identity = 43/106 (40.57%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 418 DGIVSGDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMRSHHSLAQ-QKSQGGS 732 + + G+P L +LH LLD S A L +R Y +L + D F+ R++R+EFS RP LT EQFL+SGFAE K+ + ++V+L R L + QK+ G S Sbjct: 35 EAVARGEPTGFLPLLHKVLLDDSLHLARYLSERGY-QLYPIQDRPFLEGVFRVVRNEFSYRPSLTLEQFLSSGFAERKIIFVCDVVKLCRRKADELVRLQKAAGNS 139
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: A0A3Q3J8Z5_MONAL (Centrosomal protein of 44 kDa n=3 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3J8Z5_MONAL) HSP 1 Score: 68.2 bits (165), Expect = 5.980e-9 Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 415 WDGIVSGDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMRSHHSLAQQK 717 ++G+ GDP A L ++ +TL S FA L+ EL+ TD +F ++LRD F +P LT +QFL GFA+ K+ ++ +I+ LV++ H+ L + + Sbjct: 29 YNGLSKGDPSAFLPIVSFTLTSFSSPFAEQLMAAGL-ELSGKTDLRFTDVLYKVLRDIFQYKPVLTKQQFLQWGFAQRKISVICDIINLVLQKHNQLKKPR 128
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: UPI002025C269 (centrosomal protein of 44 kDa n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002025C269) HSP 1 Score: 68.2 bits (165), Expect = 8.370e-9 Identity = 33/94 (35.11%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 415 WDGIVSGDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMRSH 696 ++G+ GDP A L ++ + S LL++ D EL + D +F+ + ++LRD F +P LT +QFL GFAE KM+++ +I+ +V + H Sbjct: 28 YNGLAKGDPAAFLPIISYCFTSFSAHIMELLVELD-VELMAKNDLRFIESIYKLLRDHFQYKPVLTKQQFLQYGFAERKMQIVCDIINMVYKKH 120
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: A0A7S0IE90_MICPS (Centrosomal protein of 44 kDa (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IE90_MICPS) HSP 1 Score: 64.3 bits (155), Expect = 1.060e-8 Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 1 Query: 418 DGIVSGDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMRSHHSLAQ 711 DG G P A L LH+ +L S L D + +L + +D +FV + LR+ F P LT QFL+ GFAE K+ LLA+ +EL R H+ A+ Sbjct: 41 DGAREGSPMALLPALHYAVLGFSRHVTRSLSDEGH-DLQAKSDSRFVENAWKALRESFHYNPTLTPTQFLSPGFAERKLLLLADAIELCKRRHNEHAR 137
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: A0A1R2C1D1_9CILI (Centrosomal protein of 44 kDa n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C1D1_9CILI) HSP 1 Score: 65.9 bits (159), Expect = 3.110e-8 Identity = 31/89 (34.83%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 424 IVSGDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMR 690 ++ G+ + L ++H+ LL S +FA ++D+ + +L S DF F+ + +++R +F+ +P L QFL+SGFAE K+ +L +I+E+V + Sbjct: 31 LIEGEASSMLPIIHYLLLSYSKVFAEYIIDQGF-DLMSKNDFGFMESVFKLMRHKFNYQPVLKIGQFLSSGFAERKLIMLIQIIEIVKK 118
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Match: A0A7S0DBF4_MICPS (Centrosomal protein of 44 kDa (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DBF4_MICPS) HSP 1 Score: 66.2 bits (160), Expect = 4.750e-8 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 433 GDPRAALVVLHWTLLDMSPLFASLLLDRDYAELNSLTDFKFVSTTLRMLRDEFSCRPQLTAEQFLTSGFAEVKMRLLAEIVELVMRSHHSLAQQK 717 G+P A L LH+ LL S S L+D + +L + +D +FV R LR+ F P L+ QFL+ GFAE K+ LL + +EL R H+ A++K Sbjct: 59 GNPMALLPALHYALLGFSRHVTSSLVDAGH-DLQAKSDARFVENAWRALREAFGYNPALSPSQFLSPGFAERKLMLLHDAIELCKRRHNEHARKK 152 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1092.835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1092.835.1 >prot_L-elsbetiae_contig1092.835.1 ID=prot_L-elsbetiae_contig1092.835.1|Name=mRNA_L-elsbetiae_contig1092.835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=394bp MIAHGGRRNSRGGSRSPSLGAMASASSSHQNAAKKIKALLRRTHFPVARLback to top mRNA from alignment at L-elsbetiae_contig1092:681..4805+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1092.835.1 ID=mRNA_L-elsbetiae_contig1092.835.1|Name=mRNA_L-elsbetiae_contig1092.835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4125bp|location=Sequence derived from alignment at L-elsbetiae_contig1092:681..4805+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1092:681..4805+ >mRNA_L-elsbetiae_contig1092.835.1 ID=mRNA_L-elsbetiae_contig1092.835.1|Name=mRNA_L-elsbetiae_contig1092.835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2364bp|location=Sequence derived from alignment at L-elsbetiae_contig1092:681..4805+ (Laminarionema elsbetiae ELsaHSoW15)back to top |