prot_L-elsbetiae_contig1088.805.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1088.805.1
Unique Nameprot_L-elsbetiae_contig1088.805.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
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BLAST of mRNA_L-elsbetiae_contig1088.805.1 vs. uniprot
Match: A0A6H5K5Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q9_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 8.540e-19
Identity = 48/107 (44.86%), Postives = 73/107 (68.22%), Query Frame = 0 
Query:   53 FRLPDAEIDAEESRVKTVQRQQWLRRKDAAMANFRRECEAEVARVRVAVEDHVRDMESMLDEELIQALDGSIAEKMENNHREKARARKIENLMSAFFCDPRVPKAQR 159
            F+L DAE DAE ++ K  Q +  +R+K  A+A FRR+CEAEV R++  +E+HV  +E  L  E+  +LDG++  K+E+NHR+K+RARK   ++S+F   P V K +R
Sbjct:  420 FQLADAEEDAERNKAKMDQCEALVRQKQEALARFRRDCEAEVERIKAVMEEHVAQLELKLKGEIQVSLDGTVKAKIEHNHRDKSRARKAHQILSSFSAAPLVSKMRR 526
[Close]
BLAST of mRNA_L-elsbetiae_contig1088.805.1 vs. uniprot
Match: D7FM03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM03_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.120e-14
Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 0 
Query:   53 FRLPDAEIDAEESRVKTVQRQQWLRRKDAAMANFRRECEAEVARVRVAVEDHVRDMESMLDEELIQALDGSIAEKMENNHREK 135
            F+L DAE DAE ++ K  Q + W+R+K  A+A FRR+CEAEV R++  +E+HV  +E  L  E+  +LDG +  K+E+NHR+K
Sbjct:   35 FQLVDAEEDAERTKAKMDQCEAWVRQKQEALARFRRDCEAEVKRIKAVMEEHVGQLELKLKGEMQVSLDGFVEAKIEHNHRDK 117
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1088.805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5Q9_9PHAE8.540e-1944.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM03_ECTSI1.120e-1446.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1088contigL-elsbetiae_contig1088:14822..17845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1088.805.1mRNA_L-elsbetiae_contig1088.805.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1088 14812..19304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1088.805.1 ID=prot_L-elsbetiae_contig1088.805.1|Name=mRNA_L-elsbetiae_contig1088.805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
MFLDDGGGGGSGVDGDDCDDGTAGGEDEDEVEEVEDEIEEVEDEDDEDGG
FGFRLPDAEIDAEESRVKTVQRQQWLRRKDAAMANFRRECEAEVARVRVA
VEDHVRDMESMLDEELIQALDGSIAEKMENNHREKARARKIENLMSAFFC
DPRVPKAQRVA*
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