mRNA_L-elsbetiae_contig10873.798.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: D7FPE8_ECTSI (Intraflagellar transpot protein 74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE8_ECTSI) HSP 1 Score: 369 bits (948), Expect = 5.650e-124 Identity = 204/247 (82.59%), Postives = 233/247 (94.33%), Query Frame = 1 Query: 1 SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMRE 741 +RREAQGLDEIFLAKQQ+E+ETQELEAEMEAVHGRME+KINTLEPEKLHEYR+LLQRN++LQ+EVA +QAEADRLSA IGQHE+R+QGAGG AALRGEYQ+LEKSVG+LRRE+ENL QDLEISNMNPK+AR+RLLSKVKADQERLKQLDAR AETT+ V MK+R+EDLESDL+ADRKGDVAQNKVEVLQKRDKEMT+F++KF+QTK EAL DQR+AR+TIV LLEHISTGLESQH++PDK MR+ Sbjct: 180 NRREAQGLDEIFLAKQQHERETQELEAEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNHLQAEVAAKQAEADRLSAMIGQHESRSQGAGG--AALRGEYQVLEKSVGALRRERENLSQDLEISNMNPKDARDRLLSKVKADQERLKQLDARAAETTEEVVRMKERLEDLESDLKADRKGDVAQNKVEVLQKRDKEMTDFIEKFDQTKQEALDDQRSARSTIVGLLEHISTGLESQHHIPDKGGMRD 424
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A6H5JUN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN2_9PHAE) HSP 1 Score: 345 bits (885), Expect = 1.430e-113 Identity = 205/290 (70.69%), Postives = 232/290 (80.00%), Query Frame = 1 Query: 1 SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQ------------------------SEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKE--------------------ARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMR 738 +RREAQGLDEIFLAKQQ+E+ETQELEAEMEAVHGRME+KINTLEPEKLHEYR+LLQRN++LQ +EVA +QAEADRLSA IGQHE+R+QGAGG AALRGEYQ+LEKSVG+LRRE+ENL QDLEISNMNPK+ AR+RLLSKVKADQERLKQLDAR AETT+ V MK+R+EDLESDL+ADRKGDVAQNKVEVLQKRDKEMT+F+DKF+QTK EAL DQR+AR+TIV LLEHISTGLESQH++PDK MR Sbjct: 143 NRREAQGLDEIFLAKQQHERETQELEAEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNHLQVAYGTEFFGVKSALSSSSLGSLGTAEVAAKQAEADRLSAMIGQHESRSQGAGG--AALRGEYQVLEKSVGALRRERENLSQDLEISNMNPKDVRATGDSLVAVSVKIFFFVKARDRLLSKVKADQERLKQLDARAAETTEEVVRMKERLEDLESDLKADRKGDVAQNKVEVLQKRDKEMTDFIDKFDQTKQEALDDQRSARSTIVGLLEHISTGLESQHHIPDKGGMR 430
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A836CE00_9STRA (Intraflagellar transport protein 74 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE00_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.770e-62 Identity = 131/292 (44.86%), Postives = 196/292 (67.12%), Query Frame = 1 Query: 1 SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKG--DVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870 +RR A+ LD +FL+KQ+ E+ ++E + VH ME ++N ++P+KL EYR L+QR+ L++EVA QAE D ++A+I +HEAR G G + R EY+ +E+ VG LRR+++ L D+E+++M PK ARE+LL+KVKADQ+R K LD R+A+T +E M+ + + E+D +A R G ++ +KVEVLQ+RD EM+EF+D+F+ T+ L +Q A+ IV+LL HIS+GLE+QH +P++ A+ TMRRL +KEKRL EM K+ TLDEK+ Sbjct: 165 NRRNARELDNVFLSKQERERAVADVEQAIAQVHREMEGRVNAMDPQKLEEYRGLVQRSQQLEAEVASVQAETDAMTARIKEHEARM---GPKGGSYRQEYKDVEREVGRLRRQRDALAADIELASMEPKAAREKLLAKVKADQDRSKDLDRRSADTASEMEKMRAAVAEAEADARAGRSGAGEIDPSKVEVLQRRDAEMSEFIDRFDATRAGVLQEQSRAQEAIVALLAHISSGLEAQHTIPEQ-------------------AQVTMRRLQGEKEKRLAEMAKIDTLDEKI 434
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A6V2XWW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XWW9_HETAK) HSP 1 Score: 187 bits (476), Expect = 1.460e-51 Identity = 114/290 (39.31%), Postives = 188/290 (64.83%), Query Frame = 1 Query: 1 SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870 +RR+AQ +D++FL KQ ++ T+E E E+E +H E K+N LEP KL +Y+ LL R+H LQ+ +Q D+ + + EA + G Y+ L++ + LRR+++ L ++ E++ M+P+EA +++L++VK D R +LD + + + +++++ DL +DL A D A+ K E L +RD+EMT+F+ KF++TK + + + + TIV LLEHIS GL ++ N+P ++ EM+DE FK+KQL++++ TM RL Q+KEKRLQEMEK+ TLD+K+ Sbjct: 177 NRRDAQEVDQVFLRKQGRDRATREAEEEVERIHRANEQKLNRLEPAKLSQYKALLDRSHQLQARAHEQQEALDQALGRAAEAEAELRERG-----HNDRYKDLQRRLDRLRRDRQGLLEEQELAAMDPREANKKVLARVKEDNRRAAELDQKARALREEIGRLRRQLGDLSADLTAKEGADSAKTKYERLSQRDQEMTQFIAKFDETKAQIVGGIQNTQDTIVGLLEHISRGLGAESNMPSADKLDEMKDEARFKEKQLETSQMTMARLRQEKEKRLQEMEKINTLDDKI 461
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A7S2WUI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUI2_9STRA) HSP 1 Score: 172 bits (437), Expect = 4.890e-46 Identity = 114/286 (39.86%), Postives = 184/286 (64.34%), Query Frame = 1 Query: 13 AQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870 AQ +D IFL +Q E Q +E ++E V+ + + KIN+++P +L +Y+ LL ++ LQ A QA+ D ++ QI ++A+ + E+Q LE L+R+ ++L ++ EIS + P E ++R+L+KVKAD R LD + +Q + +L++++ K D ++K E L +RD+EMTEF+D F++TK L +Q+ A+ TIV LL HIS GLE++ N+P + R++EM DE SFK+KQL+S++ATM+RL +++E RL+EMEK+K LDEK+ Sbjct: 168 AQEIDRIFLQTKQEEAVCQTVEQQIEGVYQKNQAKINSMDPGRLQQYQELLHQSQALQERSAHMQAQIDSVTDQIALYQAQRDA-----NSCNQEFQDLEDRGMLLQRQLQSLMEEQEISRLEPGEMQQRMLAKVKADNARAAALDEEIKQLRDESRRQEQTVSELKAEVSNGGKSD--KDKYEKLYQRDREMTEFIDGFDETKKAILNEQKEAQETIVGLLAHISKGLEAEGNMPSQERLQEMHDEASFKEKQLESSQATMQRLQKERELRLEEMEKIKNLDEKI 446
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A7S2C280_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C280_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.960e-41 Identity = 95/248 (38.31%), Postives = 163/248 (65.73%), Query Frame = 1 Query: 127 LEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870 +EP + +YR L+Q + LQ + A Q++ D+++ Q+ A+ G L E++ LE L R+ ++L+++ E++ ++PKE + ++L+KVKAD +R KQ+D + + +Q + +L DL G+ ++K E L +RD+EM+EF+D F+QT+GE DQ ++ IV LLEHIS+GL+++ ++P K R+ EM+DE SFK++QL+S++ATM+RL Q++ +R+ EMEK++ LDEK+ Sbjct: 1 MEPAQAEQYRALVQESQVLQDQCAQHQSQIDQVADQVAMLTAQRDG-----NTLNKEFRQLESQQMKLSRQMQSLEEEAEVAKLDPKEMQAKMLAKVKADTDRSKQMDMQIKDMRGENRKAEQVLAELTQDLTDRSNGNNEKDKYEKLYQRDREMSEFIDTFDQTQGEIKNDQDGTQSNIVGLLEHISSGLDAEGSMPSKERLSEMKDEASFKERQLESSQATMQRLQQERTQRVAEMEKIQNLDEKI 243
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A7R9YER1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YER1_9STRA) HSP 1 Score: 158 bits (400), Expect = 9.480e-41 Identity = 108/284 (38.03%), Postives = 172/284 (60.56%), Query Frame = 1 Query: 10 EAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLD 861 E Q +D+IFL +Q EK E+E + +H E++IN LEPEKL YR LLQ++ Q+E Q EAD ++A+I + E + + R EY LE+ LRREKE+L+ DL+IS M+P+EA +L KV D+ R ++L+ + + + +M++ + +L S L+ R G+ ++ + +RD+EMT++++ F+ + E L QR A+ TIVSLLE IS L S+ N+P +E++DE +FK++QLKS T++ L K + E+EK++ LD Sbjct: 187 EGQEVDQIFLQRQAKEKLIDEVEGSIAEIHRMAEERINQLEPEKLERYRRLLQQSEQFQAESTKMQTEADGVNARIREAEIALKE-----NSHREEYNRLERRAMQLRREKESLEYDLKISQMDPQEAFAKLREKVTDDKARTEELEGQIESAQEELGSMRRHLSELTSSLERGRPGNQDGASMDKIMQRDREMTDYIEAFDGKRTEVLDKQRIAQDTIVSLLEQISNNLHSKDNLPSTQAHKELKDEVTFKERQLKSNTQTLQSLQMHKRRTEAELEKLQNLD 465
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A421GI98_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GI98_9STRA) HSP 1 Score: 157 bits (398), Expect = 5.920e-40 Identity = 104/290 (35.86%), Postives = 169/290 (58.28%), Query Frame = 1 Query: 7 REAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVP--DKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870 REA+ +D +F+ +Q+ EK + +E EM +HG+ +DKIN L P+KL Y+ LL+ +H + E+ R E + + I Q EA R EY+ LE+ V L++E++ +D + + M+P EAR LL+KVK D+ +++ L+ E + + + + DL+SDL G +K E L +DKEMTEF++ F K + QRAA+ I+ LLEHIS G+ + +P + + + EM + +FK++QL+S+ T +RL + +KR E++KV TLD K+ Sbjct: 325 REAEDVDRVFILRQEQEKNVRRMEDEMTEIHGKHQDKINQLAPQKLKRYQELLEEHHQTEVEIEARSQELELVMHAIHQKEAELSS-----DRYRDEYEALERQVRRLQKERDAAAEDAKTAQMDPAEARAVLLAKVKDDKSKMEALEGVLQEAAAEKQELNKALADLQSDLDERASGSDPAHKYEALFAKDKEMTEFLELFPAKKEAEVQSQRAAQGVIIQLLEHISAGMAKEDKLPGTNAANLEEMRKDLTFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKI 609
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A024TR04_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024TR04_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.500e-38 Identity = 102/271 (37.64%), Postives = 166/271 (61.25%), Query Frame = 1 Query: 7 REAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDV----AQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRL 807 +EA+ +D IF+ +Q+ E+ T+ E E+ A+H R +DKIN L P KL +YR LL+ NH ++E+ + E D L I E G R EY LE+ L+ E + +Q DL+ + M+P EAR LL++VK D+ +++Q++ + A + +K+ + +++ +L+ +RK D A K ++L +RD+EMT FMD F++ K + L +QR ++A IV LLEHIS+GL Q +P S++ EM+ + +FK++QL+SA+ T RL Sbjct: 196 KEAEEVDRIFIMRQEQERTTKHFEDEINAIHMRQQDKINQLAPNKLEKYRALLEENHQGEAELEAKSQELDMLMQTIRAKEDEL-----GMDKFRDEYDQLERQAMRLKSECKTIQADLKTAQMDPTEARNMLLARVKDDKAKMEQVEKQIAAADEENAGLKKALNEVKLELE-ERKNDGPDSNASQKYDMLYQRDQEMTAFMDSFDEKKDKELENQRQSQAMIVRLLEHISSGLNRQDKMPTASKVEEMKTDLTFKERQLESAQTTKTRL 460
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A8J5M4D3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M4D3_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.310e-37 Identity = 102/290 (35.17%), Postives = 168/290 (57.93%), Query Frame = 1 Query: 7 REAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVP--DKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870 +EA+ +D +FL ++ EK + +EAEM +HG+ +DKIN L P+KL Y+ LL+ +H + E+ R E + + I Q EA R EY+ LE+ V L++E++ +D + + M+P EAR LL+KVK D+ +++ L+ + + + + D++S+L G +K E L +DKEMT F+++F K L QRAA+ IV LLEHIS G+ + +P + + + EM + +FK++QL+S+ T +RL + +KR E++KV TLD K+ Sbjct: 567 KEAEDVDRVFLMHKEQEKSVRTMEAEMTEIHGKHQDKINQLAPQKLQRYKELLEEHHQTEVEIEARSQELELVMHAIHQKEAELSS-----DRYRDEYEALERQVRRLQKERDAAAEDAKTAQMDPNEARAVLLAKVKDDKAKMEALEGVLQSAAAEKQELTKALADVQSELDERASGSDPAHKYEALFAKDKEMTTFLEQFPAKKEAELQAQRAAQGVIVQLLEHISAGMAKEDKLPGTNAANLEEMRRDLTFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKI 851 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10873.798.1 >prot_L-elsbetiae_contig10873.798.1 ID=prot_L-elsbetiae_contig10873.798.1|Name=mRNA_L-elsbetiae_contig10873.798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEback to top mRNA from alignment at L-elsbetiae_contig10873:725..6160+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10873.798.1 ID=mRNA_L-elsbetiae_contig10873.798.1|Name=mRNA_L-elsbetiae_contig10873.798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5436bp|location=Sequence derived from alignment at L-elsbetiae_contig10873:725..6160+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10873:725..6160+ >mRNA_L-elsbetiae_contig10873.798.1 ID=mRNA_L-elsbetiae_contig10873.798.1|Name=mRNA_L-elsbetiae_contig10873.798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1740bp|location=Sequence derived from alignment at L-elsbetiae_contig10873:725..6160+ (Laminarionema elsbetiae ELsaHSoW15)back to top |