mRNA_L-elsbetiae_contig10852.783.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: A0A6H5JBI1_9PHAE (MEP14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI1_9PHAE) HSP 1 Score: 468 bits (1204), Expect = 1.070e-151 Identity = 288/372 (77.42%), Postives = 323/372 (86.83%), Query Frame = 3 Query: 297 TLFSPQSDATSSVSIKAWHGKLSILGTAITSWDASIGAPDERLEGRAFIVALSGESNSGDVVYTSRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGFDDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGIVESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADWDGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDSLRFDDAFDTLVTGNFLPDGVEFTLENGATLADGSQEPTD 1412 +L +SD TSS I AWHGKLSIL TAITSWDAS+G PDERLE RA+I ALSGE+ + VVYTSRMDVEDSEIS+LGNEGD+HND D DYGL+WKVQG+DDR+ +LD+F+R+GVYG LKRN++HDNY+GAYCYGMKGDS W+DNE+++N LNG+NPQDNSDGM+I XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RNLEGDFGIVES G +++N MEGGKYGIRLSLGAQE EVYDNVI DSTRYGVFF+RGSDEAEASADWDGRPR N+IRDN ISDP E KGVAV SD ++DN F+GIDSLRFDD+ +TLVTGN LPDGV F LENGATLADGSQ TD Sbjct: 122 SLLKLKSDITSSAPIIAWHGKLSILDTAITSWDASLGGPDERLESRAYIAALSGENGAQTVVYTSRMDVEDSEISFLGNEGDYHNDTDSDYGLLWKVQGYDDRYGG-DLDIFDRIGVYGGLKRNSIHDNYIGAYCYGMKGDSNWTDNEIYDNYLNGMNPQDNSDGMTISNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRRNLEGDFGIVESTGVKVYDNVMEGGKYGIRLSLGAQECEVYDNVISDSTRYGVFFYRGSDEAEASADWDGRPRLNVIRDNTISDPVEEKGVAVKESDNTMILDNKFSGIDSLRFDDSTETLVTGNELPDGVAFDLENGATLADGSQSSTD 492
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: D7FSX3_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX3_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 1.500e-149 Identity = 284/372 (76.34%), Postives = 324/372 (87.10%), Query Frame = 3 Query: 297 TLFSPQSDATSSVSIKAWHGKLSILGTAITSWDASIGAPDERLEGRAFIVALSGESNSGDVVYTSRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGFDDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGIVESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADWDGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDSLRFDDAFDTLVTGNFLPDGVEFTLENGATLADGSQEPTD 1412 +L +SD TSS I AWHGKLSIL TAITSWDAS+G PDERLEGRA+I ALSGE+ + +VYTSRMDVEDSEIS+LGNEGD+HNDID DYGL+WKVQG+DDR+ +L +F+RVGVYG LKRN++HDNY+GAYCYGMKGDS W+DNE+++N LNG+NPQDNSDGM+I XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+RNLEGDFGIVES G ++ N MEGGKYGIRLSLGA+E +VYDNV+ DSTRYGVFF+RGSDEAEASADWDGRPR N+IR+N ISDP E KG+AV SD ++DN F+GID+LRFDD+ +TLVTGN LPDGV F LENGATLADGSQ TD Sbjct: 96 SLLKLKSDTTSSAPIIAWHGKLSILDTAITSWDASLGGPDERLEGRAYIAALSGENGAQTIVYTSRMDVEDSEISFLGNEGDYHNDIDSDYGLLWKVQGYDDRYGG-DLGIFDRVGVYGGLKRNSIHDNYIGAYCYGMKGDSNWTDNEIYDNYLNGMNPQDNSDGMTISEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRNLEGDFGIVESTGVQVYGNVMEGGKYGIRLSLGAEECDVYDNVMSDSTRYGVFFYRGSDEAEASADWDGRPRLNVIRNNTISDPGEEKGIAVKESDNTMILDNKFSGIDTLRFDDSTETLVTGNELPDGVAFDLENGATLADGSQPSTD 466
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: A0A7L4XTJ3_SACJA (Mannuronate C5-epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A7L4XTJ3_SACJA) HSP 1 Score: 439 bits (1128), Expect = 1.610e-140 Identity = 267/372 (71.77%), Postives = 305/372 (81.99%), Query Frame = 3 Query: 297 TLFSPQSDATSSVSIKAWHGKLSILGTAITSWDASIGAPDERLEGRAFIVALSGESNSGDVVYTSRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGFDDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGIVESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADWDGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDSLRFDDAFDTLVTGNFLPDGVEFTLENGATLADGSQEPTD 1412 TL +SD TS I A G++SIL TAITS+D S G DERLEGRA+I ALS E + + SRMDVEDSEISYLGNEGD+HNDI+ DYGLVWKV+G+DDRFP +L +F+RVGVYG+LKRN +HD ++GAYCYGMKG++ W+ NE+++N LNG+NPQDNSDGM+I N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RNLEGDFGIVES G +H+N MEGGKYGIRLSLGAQE +VYDNV+ D+ RYGVFF+RGSDEAEASADWDGRPR N IR+NKISDP EGKGVAVTGSD N +IDN F GIDSLRFDDA +TLVTGN LPDGVEFTL++GATLADGSQ TD Sbjct: 115 TLLKLKSDETSYAPIIAMAGQISILDTAITSYDESKGGSDERLEGRAYIAALSLEDETTGEAWISRMDVEDSEISYLGNEGDYHNDINNDYGLVWKVEGYDDRFPG-DLSLFSRVGVYGTLKRNKIHDMFIGAYCYGMKGNTLWTGNEIYDNYLNGMNPQDNSDGMTISDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTDYAEAYGNTCRRNLEGDFGIVESTGVTVHDNVMEGGKYGIRLSLGAQECDVYDNVMSDNFRYGVFFYRGSDEAEASADWDGRPRLNYIRNNKISDPVEGKGVAVTGSDDNFIIDNEFIGIDSLRFDDAQNTLVTGNILPDGVEFTLDDGATLADGSQSDTD 485
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 150 bits (380), Expect = 6.540e-35 Identity = 120/367 (32.70%), Postives = 182/367 (49.59%), Query Frame = 3 Query: 333 VSIKAWHGKLSILGTAITSWDASIGAPD-ERLEGRAFIVALS-------------GESNSGDVVYTSRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGFDDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGN--YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGIVESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADWDGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDSLRFDDAFDTLVTGNFLPDGVEFTLENGATL 1385 ++++A G L L T + +WD SI PD + +GR+++ A+S ++N G+ +RMD+EDSE+ YLG G YGL WKV+GF N D+F V VYG++ +++H N G Y YG + +W N++H+N G +P D+SD ++IH N Y XXXXXXXXXXXX + ++ES + +N E KYGIR S+G+ N ++NVI STRY + + GSD + GR + N+ ++N I E + + +DG IDNTF ++RF+DA TL++GN + + + NGA+ Sbjct: 138 INLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGE----ARMDIEDSEMGYLGYHGS------ESYGLTWKVRGF--CVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQ-QGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDS--GRSQDNVFQENNIIGGVES--IKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASF 487
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 148 bits (373), Expect = 5.470e-34 Identity = 135/350 (38.57%), Postives = 192/350 (54.86%), Query Frame = 3 Query: 333 VSIKAWHGKLSILGTAITSWDASIG-APDERLEGRAFIVALSG------ESNSGDVVYT---SRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGFDDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFG--IVESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADW---DGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDSLRFDDAFDTLVTGN 1337 ++++A G L + T + +WD S + + R++I A+S E G T +RMD+EDSE++YLG +G YGL WKV+GF N +VF+ V VYG++ +++H N+ G Y YG + +W N++H+N G +P D+SD ++IH N XXXXXXXXXXXXXXXXXXXXXXXXXX GD G ++ES + NN E KYG+RLS+G +N NVI DS++Y V+ + GSD+ W GR + NI DN I+ +E + +T +DG + IDNTF + RF+DA TL++GN Sbjct: 141 INLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGS------ESYGLTWKVRGFCK--DGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHE-QGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDP-----WVVDSGRSQDNIFSDNTITGGDES--IKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGN 474
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 147 bits (370), Expect = 1.540e-33 Identity = 106/363 (29.20%), Postives = 175/363 (48.21%), Query Frame = 3 Query: 333 VSIKAWHGKLSILGTAITSWDASIGAPDE-RLEGRAFIVALSG---------ESNSGDVVYTSRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGF-DDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGI--VESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADWDGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDS----LRFDDAFDTLVTGNFLPDGVEFTLE 1370 ++++A G L +GT + SWD S +PDE +GR++I A+S E N+ + + +RMD+E+SEI YLG + YGL WKV+GF D+ N ++F+ V VYG++ +++H G Y YG + +W N++H+N G +P D+SD ++IH N + GD G+ +ES + NT E KYG+R+S+G +N +N+I ++++Y + + GSDE + + GR + N+ N S EE + + +DG +DN F D+ +RFDDA ++++ GN D +F L+ Sbjct: 145 INLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDS------ESYGLTWKVRGFCKDKS---NPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQ-QGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSS--GRSQNNVFSQNSFSGAEET--IKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELK 493
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 145 bits (366), Expect = 1.790e-33 Identity = 115/369 (31.17%), Postives = 169/369 (45.80%), Query Frame = 3 Query: 339 IKAWHGKLSILGTAITSWDASIGAPDERL-EGRAFI----VALSGE-----SNSGDVVYTSRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGFDDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGI--VESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADWDGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDSLRFDDAFDTLVTGNFLPDGVEFT-LENGATLADGSQEP 1406 I+ G L T +TSWD P E +GR+FI L+GE +N G+ RMD+ DSE+ YLG D YG+ WKV+GF N DVF+ V VYG +K +++H Y G Y +G +G W++N +H+N G +P D+SD + I GN GD GI +E++GC IH+N ++GG++GIR+ LG+ N+V+DNV + G+F + GSDE GRP N +N I E G V + SD + +N F+G + F++A D + +GN +P ++N +T S P Sbjct: 94 IRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCAINNMGEC----RMDIIDSEMGYLGY------DASEAYGITWKVRGFCSDLS--NPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQG-GVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG---GRPCDNEFYNNTIQATETG--VKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLP 444
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE) HSP 1 Score: 141 bits (355), Expect = 4.150e-33 Identity = 104/288 (36.11%), Postives = 152/288 (52.78%), Query Frame = 3 Query: 489 SRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGFDDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGN--YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGIVESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADW---DGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDSLRFDDAFDTLVTGN 1337 +RMD+EDSE++YLG +G YGL WKV+GF N +VF+ V VYG++ +++H N+ G Y YG + +W N++H+N G +P D+SD ++IH N Y XXXXXXXXXX X N + ++ES + NN E KYG+R+S+G +N NVI DS+ Y V+ + GSD+ W GR + NI DN I+ +E + +T +DG + IDNTF ++RF+DA DT+++GN Sbjct: 26 ARMDIEDSEMAYLGYQGS------ESYGLTWKVRGFCK--DGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHE-QGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDP-----WVVDSGRSQDNIFSDNTITGGDES--IKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGN 297
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 145 bits (365), Expect = 1.010e-31 Identity = 109/362 (30.11%), Postives = 167/362 (46.13%), Query Frame = 3 Query: 339 IKAWHGKLSILGTAITSWDASIGAPDERLE-GRAFIVALSG-------ESNSGDVVYTSRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGFDDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGN--YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGIVESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADWDGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDSLRFDDAFDTLVTGNFLPDGV-----EFTLENGA 1379 ++ G L T +TSWD P E E GR+F+ +S E N+ + + RMD+ +SEI+YLG F ++ YG+ WKV+GF N +VF VYG L +++H Y G Y YG +G W++N++H+N G +P D+SD ++I N Y + ++ES I+ N + G KYGIR+SLG+ NEVY N D ++YG++ + GSDE + S DGRP N++ N + D G V + D N+ NTF +D+ F ++ +T+ +GN + DG EF +G+ Sbjct: 532 VRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGY---FDSE---SYGMTWKVRGFCKDLS--NPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQG-GVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPIG--VKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIEEDDEFDAASGS 879
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 141 bits (355), Expect = 1.220e-31 Identity = 113/380 (29.74%), Postives = 177/380 (46.58%), Query Frame = 3 Query: 333 VSIKAWHGKLSILGTAITSWDASIGAPDE-RLEGRAFIVALSG---------ESNSGDVVYTSRMDVEDSEISYLGNEGDFHNDIDLDYGLVWKVQGF-DDRFPDVNLDVFNRVGVYGSLKRNNLHDNYMGAYCYGMKGDSEWSDNEVHNNVLNGLNPQDNSDGMSIHGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLEGDFGI--VESAGCLIHNNTMEGGKYGIRLSLGAQENEVYDNVILDSTRYGVFFFRGSDEAEASADWDGRPRRNIIRDNKISDPEEGKGVAVTGSDGNDVIDNTFAGIDS----LRFDDAFDTLVTGNFLPDGVEFTL--ENGATL---ADGSQEP 1406 ++++A G L + T + SWD S +PDE +GR++I A+S E N+ + + +RMD+E SEI YLG + D + YGL WKV+GF +D+ N +VF+ V VYG++ +++H G Y YG + +W N++H+N G +P D+SD ++IH N + GD G+ +ES + NT E KYG+R S+G +N +N I ++ Y + + G+DE + + GR + N+ N S EE + + +DG +DN F D+ +RFD+A + L+ GN D EF L +N A AD EP Sbjct: 141 INLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLG-----YWDSES-YGLTWKVRGFCEDKS---NPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQ-QGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSS--GRSQNNVFSQNSFSGAEET--IKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEP 506 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10852.783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10852.783.1 >prot_L-elsbetiae_contig10852.783.1 ID=prot_L-elsbetiae_contig10852.783.1|Name=mRNA_L-elsbetiae_contig10852.783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=386bp MSHSPVLTASHFATLFSPQSDATSSVSIKAWHGKLSILGTAITSWDASIGback to top mRNA from alignment at L-elsbetiae_contig10852:517..6438+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10852.783.1 ID=mRNA_L-elsbetiae_contig10852.783.1|Name=mRNA_L-elsbetiae_contig10852.783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5922bp|location=Sequence derived from alignment at L-elsbetiae_contig10852:517..6438+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10852:517..6438+ >mRNA_L-elsbetiae_contig10852.783.1 ID=mRNA_L-elsbetiae_contig10852.783.1|Name=mRNA_L-elsbetiae_contig10852.783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2316bp|location=Sequence derived from alignment at L-elsbetiae_contig10852:517..6438+ (Laminarionema elsbetiae ELsaHSoW15)back to top |